JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles von Mathelier, Anthony, Zhao, Xiaobei, Zhang, Allen W, Parcy, François, Worsley-Hunt, Rebecca, Arenillas, David J, Buchman, Sorana, Chen, Chih-yu, Chou, Alice, Ienasescu, Hans, Lim, Jonathan, Shyr, Casper, Tan, Ge, Zhou, Michelle, Lenhard, Boris, Sandelin, Albin, Wasserman, Wyeth W

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JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles von Portales-Casamar, Elodie, Thongjuea, Supat, Kwon, Andrew T, Arenillas, David, Zhao, Xiaobei, Valen, Eivind, Yusuf, Dimas, Lenhard, Boris, Wasserman, Wyeth W, Sandelin, Albin

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Amyloid precursor protein-mediated endocytic pathway disruption induces axonal dysfunction and neurodegeneration von Xu, Wei, Weissmiller, April M, White, 2nd, Joseph A, Fang, Fang, Wang, Xinyi, Wu, Yiwen, Pearn, Matthew L, Zhao, Xiaobei, Sawa, Mariko, Chen, Shengdi, Gunawardena, Shermali, Ding, Jianqing, Mobley, William C, Wu, Chengbiao

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SCISSOR: a framework for identifying structural changes in RNA transcripts von Choi, Hyo Young, Jo, Heejoon, Zhao, Xiaobei, Hoadley, Katherine A., Newman, Scott, Holt, Jeremiah, Hayward, Michele C., Love, Michael I., Marron, J. S., Hayes, D. Neil

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Aberrant GlyRS-HDAC6 interaction linked to axonal transport deficits in Charcot-Marie-Tooth neuropathy von Mo, Zhongying, Zhao, Xiaobei, Liu, Huaqing, Hu, Qinghua, Chen, Xu-Qiao, Pham, Jessica, Wei, Na, Liu, Ze, Zhou, Jiadong, Burgess, Robert W., Pfaff, Samuel L., Caskey, C. Thomas, Wu, Chengbiao, Bai, Ge, Yang, Xiang-Lei

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Polyadenylation site–induced decay of upstream transcripts enforces promoter directionality von Ntini, Evgenia, Järvelin, Aino I, Bornholdt, Jette, Chen, Yun, Boyd, Mette, Jørgensen, Mette, Andersson, Robin, Hoof, Ilka, Schein, Aleks, Andersen, Peter R, Andersen, Pia K, Preker, Pascal, Valen, Eivind, Zhao, Xiaobei, Pelechano, Vicent, Steinmetz, Lars M, Sandelin, Albin, Jensen, Torben Heick

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GMD: measuring the distance between histograms with applications on high-throughput sequencing reads von XIAOBEI ZHAO, SANDELIN, Albin

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TRiC subunits enhance BDNF axonal transport and rescue striatal atrophy in Huntington’s disease von Zhao, Xiaobei, Chen, Xu-Qiao, Han, Eugene, Hu, Yue, Paik, Paul, Ding, Zhiyong, Overman, Julia, Lau, Alice L., Shahmoradian, Sarah H., Chiu, Wah, Thompson, Leslie M., Wu, Chengbiao, Mobley, William C.

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New histone supply regulates replication fork speed and PCNA unloading von Mejlvang, Jakob, Feng, Yunpeng, Alabert, Constance, Neelsen, Kai J, Jasencakova, Zuzana, Zhao, Xiaobei, Lees, Michael, Sandelin, Albin, Pasero, Philippe, Lopes, Massimo, Groth, Anja

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Superior Removal of Hydantoin Lesions Relative to Other Oxidized Bases by the Human DNA Glycosylase hNEIL1 von Krishnamurthy, Nirmala, Zhao, Xiaobei, Burrows, Cynthia J, David, Sheila S

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mouse ortholog of NEIL3 is a functional DNA glycosylase in vitro and in vivo von Liu, Minmin, Bandaru, Viswanath, Bond, Jeffrey P, Jaruga, Pawel, Zhao, Xiaobei, Christov, Plamen P, Burrows, Cynthia J, Rizzo, Carmelo J, Dizdaroglu, Miral, Wallace, Susan S

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Upregulation of RIN3 induces endosomal dysfunction in Alzheimer’s disease von Shen, Ruinan, Zhao, Xiaobei, He, Lu, Ding, Yongbo, Xu, Wei, Lin, Suzhen, Fang, Savannah, Yang, Wanlin, Sung, Kijung, Spencer, Brian, Rissman, Robert A., Lei, Ming, Ding, Jianqing, Wu, Chengbiao

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Systematic clustering of transcription start site landscapes von Zhao, Xiaobei, Valen, Eivind, Parker, Brian J, Sandelin, Albin

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Biogenic mechanisms and utilization of small RNAs derived from human protein-coding genes von Valen, Eivind, Preker, Pascal, Andersen, Peter Refsing, Zhao, Xiaobei, Chen, Yun, Ender, Christine, Dueck, Anne, Meister, Gunter, Sandelin, Albin, Jensen, Torben Heick

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Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE von Valen, Eivind, Pascarella, Giovanni, Chalk, Alistair, Maeda, Norihiro, Kojima, Miki, Kawazu, Chika, Murata, Mitsuyoshi, Nishiyori, Hiromi, Lazarevic, Dejan, Motti, Dario, Marstrand, Troels Torben, Tang, Man-Hung Eric, Zhao, Xiaobei, Krogh, Anders, Winther, Ole, Arakawa, Takahiro, Kawai, Jun, Wells, Christine, Daub, Carsten, Harbers, Matthias, Hayashizaki, Yoshihide, Gustincich, Stefano, Sandelin, Albin, Carninci, Piero

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Prediction of RNA Polymerase II recruitment, elongation and stalling from histone modification data von Chen, Yun, Jørgensen, Mette, Kolde, Raivo, Zhao, Xiaobei, Parker, Brian, Valen, Eivind, Wen, Jiayu, Sandelin, Albin

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A γ-secretase inhibitor, but not a γ-secretase modulator, induced defects in BDNF axonal trafficking and signaling: evidence for a role for APP von Weissmiller, April M, Natera-Naranjo, Orlangie, Reyna, Sol M, Pearn, Matthew L, Zhao, Xiaobei, Nguyen, Phuong, Cheng, Soan, Goldstein, Lawrence S B, Tanzi, Rudolph E, Wagner, Steven L, Mobley, William C, Wu, Chengbiao

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Design, synthesis and structure–activity relationship (SAR) studies of 2,4-disubstituted pyrimidine derivatives: Dual activity as cholinesterase and Aβ-aggregation inhibitors von Mohamed, Tarek, Zhao, Xiaobei, Habib, Lila K., Yang, Jerry, Rao, Praveen P.N.

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Combined Targeted DNA Sequencing in Non-Small Cell Lung Cancer (NSCLC) Using UNCseq and NGScopy, and RNA Sequencing Using UNCqeR for the Detection of Genetic Aberrations in NSCLC von Zhao, Xiaobei, Wang, Anyou, Walter, Vonn, Patel, Nirali M, Eberhard, David A, Hayward, Michele C, Salazar, Ashley H, Jo, Heejoon, Soloway, Matthew G, Wilkerson, Matthew D, Parker, Joel S, Yin, Xiaoying, Zhang, Guosheng, Siegel, Marni B, Rosson, Gary B, Earp, 3rd, H Shelton, Sharpless, Norman E, Gulley, Margaret L, Weck, Karen E, Hayes, D Neil, Moschos, Stergios J

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Genetic and Pharmacological Strategies to Refunctionalize the von Hippel Lindau R167Q Mutant Protein von ZHIYONG DING, GERMAN, Peter, SHUXING ZHANG, MILLS, Gordon B, JONASCH, Eric, SHANSHAN BAI, REDDY, A. Srinivas, LIU, Xian-De, MIANEN SUN, LIJUN ZHOU, XIAOHUA CHEN, XIAOBEI ZHAO, CHENGBIAO WU

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