Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of Klebsiella pneumoniae von Wyres, Kelly L, Wick, Ryan R, Judd, Louise M, Froumine, Roni, Tokolyi, Alex, Gorrie, Claire L, Lam, Margaret M C, Duchêne, Sebastián, Jenney, Adam, Holt, Kathryn E

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Klebsiella pneumoniae as a key trafficker of drug resistance genes from environmental to clinically important bacteria von .Wyres, Kelly L, Holt, Kathryn E

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Population genomics of Klebsiella pneumoniae von Wyres, Kelly L., Lam, Margaret M. C., Holt, Kathryn E.

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A genomic surveillance framework and genotyping tool for Klebsiella pneumoniae and its related species complex von Lam, Margaret M. C., Wick, Ryan R., Watts, Stephen C., Cerdeira, Louise T., Wyres, Kelly L., Holt, Kathryn E.

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Trycycler: consensus long-read assemblies for bacterial genomes von Wick, Ryan R, Judd, Louise M, Cerdeira, Louise T, Hawkey, Jane, Méric, Guillaume, Vezina, Ben, Wyres, Kelly L, Holt, Kathryn E

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Kaptive Web: User-Friendly Capsule and Lipopolysaccharide Serotype Prediction for Klebsiella Genomes von Wick, Ryan R, Heinz, Eva, Holt, Kathryn E, Wyres, Kelly L

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Klebsiella pneumoniae Population Genomics and Antimicrobial-Resistant Clones von Wyres, Kelly L, Holt, Kathryn E

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Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination von Lam, Margaret M. C., Wyres, Kelly L., Duchêne, Sebastian, Wick, Ryan R., Judd, Louise M., Gan, Yunn-Hwen, Hoh, Chu-Han, Archuleta, Sophia, Molton, James S., Kalimuddin, Shirin, Koh, Tse Hsien, Passet, Virginie, Brisse, Sylvain, Holt, Kathryn E.

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Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae von Lam, Margaret M C, Wyres, Kelly L, Judd, Louise M, Wick, Ryan R, Jenney, Adam, Brisse, Sylvain, Holt, Kathryn E

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Identification of Klebsiella capsule synthesis loci from whole genome data von Wyres, Kelly L, Wick, Ryan R, Gorrie, Claire, Jenney, Adam, Follador, Rainer, Thomson, Nicholas R, Holt, Kathryn E

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Ethanolamine metabolism through two genetically distinct loci enables Klebsiella pneumoniae to bypass nutritional competition in the gut von Barnes, Andrew J, Bennett, Emma F, Vezina, Ben, Hudson, Andrew W, Hernandez, Giovanna E, Nutter, Noah A, Bray, Andrew S, Nagpal, Ravinder, Wyres, Kelly L, Zafar, M Ammar

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Genomic surveillance for hypervirulence and multi-drug resistance in invasive Klebsiella pneumoniae from South and Southeast Asia von Wyres, Kelly L, Nguyen, To N T, Lam, Margaret M C, Judd, Louise M, van Vinh Chau, Nguyen, Dance, David A B, Ip, Margaret, Karkey, Abhilasha, Ling, Clare L, Miliya, Thyl, Newton, Paul N, Lan, Nguyen Phu Huong, Sengduangphachanh, Amphone, Turner, Paul, Veeraraghavan, Balaji, Vinh, Phat Voong, Vongsouvath, Manivanh, Thomson, Nicholas R, Baker, Stephen, Holt, Kathryn E

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Antimicrobial-Resistant Klebsiella pneumoniae Carriage and Infection in Specialized Geriatric Care Wards Linked to Acquisition in the Referring Hospital von Gorrie, Claire L, Mirceta, Mirjana, Wick, Ryan R, Judd, Louise M, Wyres, Kelly L, Thomson, Nicholas R, Strugnell, Richard A, Pratt, Nigel F, Garlick, Jill S, Watson, Kerrie M, Hunter, Peter C, McGloughlin, Steve A, Spelman, Denis W, Jenney, Adam W J, Holt, Kathryn E

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Emergence and rapid global dissemination of CTX-M-15-associated Klebsiella pneumoniae strain ST307 von Wyres, Kelly L, Hawkey, Jane, Hetland, Marit A K, Fostervold, Aasmund, Wick, Ryan R, Judd, Louise M, Hamidian, Mohammad, Howden, Benjamin P, Löhr, Iren H, Holt, Kathryn E

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Genomic dissection of Klebsiella pneumoniae infections in hospital patients reveals insights into an opportunistic pathogen von Gorrie, Claire L., Mirčeta, Mirjana, Wick, Ryan R., Judd, Louise M., Lam, Margaret M. C., Gomi, Ryota, Abbott, Iain J., Thomson, Nicholas R., Strugnell, Richard A., Pratt, Nigel F., Garlick, Jill S., Watson, Kerrie M., Hunter, Peter C., Pilcher, David V., McGloughlin, Steve A., Spelman, Denis W., Wyres, Kelly L., Jenney, Adam W. J., Holt, Kathryn E.

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Epidemiology and genomic analysis of Klebsiella oxytoca from a single hospital network in Australia von Stewart, James, Judd, Louise M, Jenney, Adam, Holt, Kathryn E, Wyres, Kelly L, Hawkey, Jane

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Silent spread of mobile colistin resistance gene mcr-9.1 on IncHI2 ‘superplasmids’ in clinical carbapenem-resistant Enterobacterales von Macesic, Nenad, Blakeway, Luke V., Stewart, James D., Hawkey, Jane, Wyres, Kelly L., Judd, Louise M., Wick, Ryan R., Jenney, Adam W., Holt, Kathryn E., Peleg, Anton Y.

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Diversity and evolution of surface polysaccharide synthesis loci in Enterobacteriales von Holt, Kathryn E., Lassalle, Florent, Wyres, Kelly L., Wick, Ryan, Mostowy, Rafał J.

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A curated collection of Klebsiella metabolic models reveals variable substrate usage and gene essentiality von Hawkey, Jane, Vezina, Ben, Monk, Jonathan M, Judd, Louise M, Harshegyi, Taylor, López-Fernández, Sebastián, Rodrigues, Carla, Brisse, Sylvain, Holt, Kathryn E, Wyres, Kelly L

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Kaptive 2.0: updated capsule and lipopolysaccharide locus typing for the Klebsiella pneumoniae species complex von Lam, Margaret M C, Wick, Ryan R, Judd, Louise M, Holt, Kathryn E, Wyres, Kelly L

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