Accounting for cell type hierarchy in evaluating single cell RNA-seq clustering von Wu, Zhijin, Wu, Hao

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Mouse blood cells types and aging prediction using penalized Latent Dirichlet Allocation von Wu, Xiaotian, Teo, Yee Voan, Neretti, Nicola, Wu, Zhijin

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The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores von Irizarry, Rafael A, Feinberg, Andrew P, Ladd-Acosta, Christine, Wen, Bo, Wu, Zhijin, Montano, Carolina, Onyango, Patrick, Cui, Hengmi, Gabo, Kevin, Rongione, Michael, Webster, Maree, Ji, Hong, Potash, James B, Sabunciyan, Sarven

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A review of statistical methods for preprocessing oligonucleotide microarrays von Wu, Zhijin

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Non-linear Normalization for Non-UMI Single Cell RNA-Seq von Wu, Zhijin, Su, Kenong, Wu, Hao

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The transcriptome and proteome of the diatom Thalassiosira pseudonana reveal a diverse phosphorus stress response von Dyhrman, Sonya T, Jenkins, Bethany D, Rynearson, Tatiana A, Saito, Mak A, Mercier, Melissa L, Alexander, Harriet, Whitney, Leann P, Drzewianowski, Andrea, Bulygin, Vladimir V, Bertrand, Erin M, Wu, Zhijin, Benitez-Nelson, Claudia, Heithoff, Abigail

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Gold nanocage-photosensitizer conjugates for dual-modal image-guided enhanced photodynamic therapy von Srivatsan, Avinash, Jenkins, Samir V, Jeon, Mansik, Wu, Zhijin, Kim, Chulhong, Chen, Jingyi, Pandey, Ravindra K

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Adipose tissue palmitoleic acid and obesity in humans: does it behave as a lipokine? von Gong, Jian, Campos, Hannia, McGarvey, Stephen, Wu, Zhijin, Goldberg, Robert, Baylin, Ana

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Comparison of Affymetrix GeneChip expression measures von Irizarry, Rafael A., Wu, Zhijin, Jaffee, Harris A.

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Targeting tumor-associated macrophages in an orthotopic murine model of diffuse malignant mesothelioma von Miselis, Nathan R, Wu, Zhijin J, Van Rooijen, Nico, Kane, Agnes B

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Preprocessing of oligonucleotide array data von Wu, Zhijin, Irizarry, Rafael A

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DNA hypomethylation arises later in prostate cancer progression than CpG island hypermethylation and contributes to metastatic tumor heterogeneity von Yegnasubramanian, Srinivasan, Haffner, Michael C, Zhang, Yonggang, Gurel, Bora, Cornish, Toby C, Wu, Zhijin, Irizarry, Rafael A, Morgan, James, Hicks, Jessica, DeWeese, Theodore L, Isaacs, William B, Bova, G Steven, De Marzo, Angelo M, Nelson, William G

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Addressing heterogeneous sensitivity in biomarker screening with application in NanoString nCounter data von Yu, Chang, Wu, Zhijin

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The International Conference on Intelligent Biology and Medicine (ICIBM) 2018: bioinformatics towards translational applications von Liu, Xiaoming, Xie, Lei, Wu, Zhijin, Wang, Kai, Zhao, Zhongming, Ruan, Jianhua, Zhi, Degui

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GSK-3 Inhibitor Elraglusib Enhances Tumor-Infiltrating Immune Cell Activation in Tumor Biopsies and Synergizes with Anti-PD-L1 in a Murine Model of Colorectal Cancer von Huntington, Kelsey E, Louie, Anna D, Srinivasan, Praveen R, Schorl, Christoph, Lu, Shaolei, Silverberg, David, Newhouse, Daniel, Wu, Zhijin, Zhou, Lanlan, Borden, Brittany A, Giles, Francis J, Dooner, Mark, Carneiro, Benedito A, El-Deiry, Wafik S

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The International Conference on Intelligent Biology and Medicine (ICIBM) 2018: genomics with bigger data and wider applications von Wu, Zhijin, Yan, Jingwen, Wang, Kai, Liu, Xiaoming, Guo, Yan, Zhi, Degui, Ruan, Jianhua, Zhao, Zhongming

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Covariate-defined latent space random effects model von Austin, Andrea, Linkletter, Crystal, Wu, Zhijin

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Anti-HIV activity in cervical-vaginal secretions from HIV-positive and -negative women correlate with innate antimicrobial levels and IgG antibodies von Ghosh, Mimi, Fahey, John V, Shen, Zheng, Lahey, Timothy, Cu-Uvin, Susan, Wu, Zhijin, Mayer, Kenneth, Wright, Peter F, Kappes, John C, Ochsenbauer, Christina, Wira, Charles R

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Alternative Statistical Parameter for High-Throughput Screening Assay Quality Assessment von Sui, Yunxia, Wu, Zhijin

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Chromosome-wide mapping of DNA methylation patterns in normal and malignant prostate cells reveals pervasive methylation of gene-associated and conserved intergenic sequences von Yegnasubramanian, Srinivasan, Wu, Zhijin, Haffner, Michael C, Esopi, David, Aryee, Martin J, Badrinath, Raghav, He, Tony L, Morgan, James D, Carvalho, Benilton, Zheng, Qizhi, De Marzo, Angelo M, Irizarry, Rafael A, Nelson, William G

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