The physiological variability of channel density in hippocampal CA1 pyramidal cells and interneurons explored using a unified data-driven modeling workflow von Migliore, Rosanna, Lupascu, Carmen A, Bologna, Luca L, Romani, Armando, Courcol, Jean-Denis, Antonel, Stefano, Van Geit, Werner A H, Thomson, Alex M, Mercer, Audrey, Lange, Sigrun, Falck, Joanne, Rössert, Christian A, Shi, Ying, Hagens, Olivier, Pezzoli, Maurizio, Freund, Tamas F, Kali, Szabolcs, Muller, Eilif B, Schürmann, Felix, Markram, Henry, Migliore, Michele

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The SONATA data format for efficient description of large-scale network models von Dai, Kael, Hernando, Juan, Billeh, Yazan N, Gratiy, Sergey L, Planas, Judit, Davison, Andrew P, Dura-Bernal, Salvador, Gleeson, Padraig, Devresse, Adrien, Dichter, Benjamin K, Gevaert, Michael, King, James G, Van Geit, Werner A H, Povolotsky, Arseny V, Muller, Eilif, Courcol, Jean-Denis, Arkhipov, Anton

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HippoUnit: A software tool for the automated testing and systematic comparison of detailed models of hippocampal neurons based on electrophysiological data von Sáray, Sára, Rössert, Christian A, Appukuttan, Shailesh, Migliore, Rosanna, Vitale, Paola, Lupascu, Carmen A, Bologna, Luca L, Van Geit, Werner, Romani, Armando, Davison, Andrew P, Muller, Eilif, Freund, Tamás F, Káli, Szabolcs

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A calcium-based plasticity model for predicting long-term potentiation and depression in the neocortex von Chindemi, Giuseppe, Abdellah, Marwan, Amsalem, Oren, Benavides-Piccione, Ruth, Delattre, Vincent, Doron, Michael, Ecker, András, Jaquier, Aurélien T., King, James, Kumbhar, Pramod, Monney, Caitlin, Perin, Rodrigo, Rössert, Christian, Tuncel, Anil M., Van Geit, Werner, DeFelipe, Javier, Graupner, Michael, Segev, Idan, Markram, Henry, Muller, Eilif B.

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Computational synthesis of cortical dendritic morphologies von Kanari, Lida, Dictus, Hugo, Chalimourda, Athanassia, Arnaudon, Alexis, Van Geit, Werner, Coste, Benoit, Shillcock, Julian, Hess, Kathryn, Markram, Henry

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Associations between in vitro, in vivo and in silico cell classes in mouse primary visual cortex von Wei, Yina, Nandi, Anirban, Jia, Xiaoxuan, Siegle, Joshua H., Denman, Daniel, Lee, Soo Yeun, Buchin, Anatoly, Van Geit, Werner, Mosher, Clayton P., Olsen, Shawn, Anastassiou, Costas A.

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Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons von Iavarone, Elisabetta, Yi, Jane, Shi, Ying, Zandt, Bas-Jan, O'Reilly, Christian, Van Geit, Werner, Rössert, Christian, Markram, Henry, Hill, Sean L

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Controlling morpho-electrophysiological variability of neurons with detailed biophysical models von Arnaudon, Alexis, Reva, Maria, Zbili, Mickael, Markram, Henry, Van Geit, Werner, Kanari, Lida

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Single Neuron Optimization as a Basis for Accurate Biophysical Modeling: The Case of Cerebellar Granule Cells von Masoli, Stefano, Rizza, Martina F, Sgritta, Martina, Van Geit, Werner, Schürmann, Felix, D'Angelo, Egidio

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A universal workflow for creation, validation, and generalization of detailed neuronal models von Reva, Maria, Rössert, Christian, Arnaudon, Alexis, Damart, Tanguy, Mandge, Darshan, Tuncel, Anıl, Ramaswamy, Srikanth, Markram, Henry, Van Geit, Werner

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Statistical Emulation of Neural Simulators: Application to Neocortical L2/3 Large Basket Cells von Shapira, Gilad, Marcus-Kalish, Mira, Amsalem, Oren, Van Geit, Werner, Segev, Idan, Steinberg, David M

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Using Neurofitter to fit a Purkinje cell model to experimental data von Van Geit, Werner, De Schutter, Erik

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From Neuron Biophysics to Orientation Selectivity in Electrically Coupled Networks of Neocortical L2/3 Large Basket Cells von Amsalem, Oren, Van Geit, Werner, Muller, Eilif, Markram, Henry, Segev, Idan

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BluePyOpt: Leveraging Open Source Software and Cloud Infrastructure to Optimise Model Parameters in Neuroscience von Van Geit, Werner, Gevaert, Michael, Chindemi, Giuseppe, Rössert, Christian, Courcol, Jean-Denis, Muller, Eilif B, Schürmann, Felix, Segev, Idan, Markram, Henry

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A Multimodal Fitting Approach to Construct Single-Neuron Models With Patch Clamp and High-Density Microelectrode Arrays von Buccino, Alessio Paolo, Damart, Tanguy, Bartram, Julian, Mandge, Darshan, Xue, Xiaohan, Zbili, Mickael, Gänswein, Tobias, Jaquier, Aurélien, Emmenegger, Vishalini, Markram, Henry, Hierlemann, Andreas, Van Geit, Werner

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Single-neuron models linking electrophysiology, morphology, and transcriptomics across cortical cell types von Nandi, Anirban, Chartrand, Thomas, Van Geit, Werner, Buchin, Anatoly, Yao, Zizhen, Lee, Soo Yeun, Wei, Yina, Kalmbach, Brian, Lee, Brian, Lein, Ed, Berg, Jim, Sümbül, Uygar, Koch, Christof, Tasic, Bosiljka, Anastassiou, Costas A.

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Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits von Gleeson, Padraig, Cantarelli, Matteo, Marin, Boris, Quintana, Adrian, Earnshaw, Matt, Sadeh, Sadra, Piasini, Eugenio, Birgiolas, Justas, Cannon, Robert C., Cayco-Gajic, N. Alex, Crook, Sharon, Davison, Andrew P., Dura-Bernal, Salvador, Ecker, András, Hines, Michael L., Idili, Giovanni, Lanore, Frederic, Larson, Stephen D., Lytton, William W., Majumdar, Amitava, McDougal, Robert A., Sivagnanam, Subhashini, Solinas, Sergio, Stanislovas, Rokas, van Albada, Sacha J., van Geit, Werner, Silver, R. Angus

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Single-neuron models linking electrophysiology, morphology, and transcriptomics across cortical cell types von Nandi, Anirban, Chartrand, Thomas, Van Geit, Werner, Buchin, Anatoly, Yao, Zizhen, Lee, Soo Yeun, Wei, Yina, Kalmbach, Brian, Lee, Brian, Lein, Ed, Berg, Jim, Sümbül, Uygar, Koch, Christof, Tasic, Bosiljka, Anastassiou, Costas A.

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Community-based reconstruction and simulation of a full-scale model of the rat hippocampus CA1 region von Romani, Armando, Antonietti, Alberto, Bella, Davide, Budd, Julian, Giacalone, Elisabetta, Kurban, Kerem, Sáray, Sára, Abdellah, Marwan, Arnaudon, Alexis, Boci, Elvis, Colangelo, Cristina, Courcol, Jean-Denis, Delemontex, Thomas, Ecker, András, Falck, Joanne, Favreau, Cyrille, Gevaert, Michael, Hernando, Juan B, Herttuainen, Joni, Ivaska, Genrich, Kanari, Lida, Kaufmann, Anna-Kristin, King, James Gonzalo, Kumbhar, Pramod, Lange, Sigrun, Lu, Huanxiang, Lupascu, Carmen Alina, Migliore, Rosanna, Petitjean, Fabien, Planas, Judit, Rai, Pranav, Ramaswamy, Srikanth, Reimann, Michael W, Riquelme, Juan Luis, Román Guerrero, Nadir, Shi, Ying, Sood, Vishal, Sy, Mohameth François, Van Geit, Werner, Vanherpe, Liesbeth, Freund, Tamás F, Mercer, Audrey, Muller, Eilif, Schürmann, Felix, Thomson, Alex M, Migliore, Michele, Káli, Szabolcs, Markram, Henry

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Directional sensitivity of cortical neurons towards TMS-induced electric fields von Weise, Konstantin, Worbs, Torge, Kalloch, Benjamin, Souza, Victor H., Jaquier, Aurélien Tristan, Van Geit, Werner, Thielscher, Axel, Knösche, Thomas R.

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