Estimating maximal microbial growth rates from cultures, metagenomes, and single cells via codon usage patterns von Weissman, Jake L., Hou, Shengwei, Fuhrman, Jed A.

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Exploring the functional composition of the human microbiome using a hand-curated microbial trait database von Weissman, Jake L., Dogra, Sonia, Javadi, Keyan, Bolten, Samantha, Flint, Rachel, Davati, Cyrus, Beattie, Jess, Dixit, Keshav, Peesay, Tejasvi, Awan, Shehar, Thielen, Peter, Breitwieser, Florian, Johnson, Philip L. F., Karig, David, Fagan, William F., Bewick, Sharon

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Trait-based analysis of the human skin microbiome von Bewick, Sharon, Gurarie, Eliezer, Weissman, Jake L, Beattie, Jess, Davati, Cyrus, Flint, Rachel, Thielen, Peter, Breitwieser, Florian, Karig, David, Fagan, William F

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Linking high GC content to the repair of double strand breaks in prokaryotic genomes von Weissman, Jake L, Fagan, William F, Johnson, Philip L F

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Avoidance of Self during CRISPR Immunization von Weissman, Jake L., Stoltzfus, Arlin, Westra, Edze R., Johnson, Philip L.F.

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Immune loss as a driver of coexistence during host-phage coevolution von Weissman, JL, Holmes, Rayshawn, Barrangou, Rodolphe, Moineau, Sylvain, Fagan, William F, Levin, Bruce, Johnson, Philip L F

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Visualization and prediction of CRISPR incidence in microbial trait-space to identify drivers of antiviral immune strategy von Weissman, JL, Laljani, Rohan M. R., Fagan, William F., Johnson, Philip L. F.

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Immune lag is a major cost of prokaryotic adaptive immunity during viral outbreaks von Weissman, Jake L., Alseth, Ellinor O., Meaden, Sean, Westra, Edze R., Fuhrman, Jed A.

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Network-Based Prediction of Novel CRISPR-Associated Genes in Metagenomes von Weissman, Jake L., Johnson, Philip L. F.

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NCBI's Virus Discovery Codeathon: Building "FIVE" -The Federated Index of Viral Experiments API Index von Marti-Carreras, Joan, Gener, Alejandro Rafael, Miller, Sierra D., Brito, Anderson F., Camacho, Christiam E., Connor, Ryan, Deboutte, Ward, Glickman, Cody, Kristensen, David M., Meyer, Wynn K., Modha, Sejal, Norris, Alexis L., Saha, Surya, Belford, Anna K., Biederstedt, Evan, Brister, James Rodney, Buchmann, Jan P., Cooley, Nicholas P., Edwards, Robert A., Javkar, Kiran, Muchow, Michael, Muralidharan, Harihara Subrahmaniam, Pepe-Ranney, Charles, Shah, Nidhi, Shakya, Migun, Tisza, Michael J., Tully, Benjamin J., Vanmechelen, Bert, Virta, Valerie C., Weissman, J. L., Zalunin, Vadim, Efremov, Alexandre, Busby, Ben

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The Bioinformatics Virtual Coordination Network: An Open-Source and Interactive Learning Environment von Tully, Benjamin J., Buongiorno, Joy, Cohen, Ashley B., Cram, Jacob A., Garber, Arkadiy I., Hu, Sarah K., Krinos, Arianna I., Leftwich, Philip T., Marshall, Alexis J., Sieradzki, Ella T., Speth, Daan R., Suter, Elizabeth A, Trivedi, Christopher B., Valentin-Alvarado, Luis E., Weissman, JL

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Supplementary Figure S16 from Immune lag is a major cost of prokaryotic adaptive immunity during viral outbreaks von Weissman, Jake L., Alseth, Ellinor O., Meaden, Sean, westra, Edze R., Fuhrman, Jed A.

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S8Text from Immune lag is a major cost of prokaryotic adaptive immunity during viral outbreaks von Weissman, Jake L., Alseth, Ellinor O., Meaden, Sean, westra, Edze R., Fuhrman, Jed A.

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CD47-blocking antibodies restore phagocytosis and prevent atherosclerosis von Kojima, Yoko, Volkmer, Jens-Peter, McKenna, Kelly, Civelek, Mete, Lusis, Aldons Jake, Miller, Clint L., Direnzo, Daniel, Nanda, Vivek, Ye, Jianqin, Connolly, Andrew J., Schadt, Eric E., Quertermous, Thomas, Betancur, Paola, Maegdefessel, Lars, Matic, Ljubica Perisic, Hedin, Ulf, Weissman, Irving L., Leeper, Nicholas J.

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