Whole genome sequencing of Brucella melitensis isolated from 57 patients in Germany reveals high diversity in strains from Middle East von Georgi, Enrico, Walter, Mathias C, Pfalzgraf, Marie-Theres, Northoff, Bernd H, Holdt, Lesca M, Scholz, Holger C, Zoeller, Lothar, Zange, Sabine, Antwerpen, Markus H

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Ultrasensitive Detection of Bacillus anthracis by Real-Time PCR Targeting a Polymorphism in Multi-Copy 16S rRNA Genes and Their Transcripts von Braun, Peter, Nguyen, Martin Duy-Thanh, Walter, Mathias C., Grass, Gregor

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Catching SARS-CoV-2 by Sequence Hybridization: a Comparative Analysis von Rehn, Alexandra, Braun, Peter, Knuepfer, Mandy, Woelfel, Roman, Antwerpen, Markus H., Walter, Mathias C.

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eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences von Huerta-Cepas, Jaime, Szklarczyk, Damian, Forslund, Kristoffer, Cook, Helen, Heller, Davide, Walter, Mathias C, Rattei, Thomas, Mende, Daniel R, Sunagawa, Shinichi, Kuhn, Michael, Jensen, Lars Juhl, von Mering, Christian, Bork, Peer

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Machine Learning Algorithms for Classification of MALDI-TOF MS Spectra from Phylogenetically Closely Related Species Brucella melitensis, Brucella abortus and Brucella suis von Dematheis, Flavia, Walter, Mathias C., Lang, Daniel, Antwerpen, Markus, Scholz, Holger C., Pfalzgraf, Marie-Theres, Mantel, Enrico, Hinz, Christin, Wölfel, Roman, Zange, Sabine

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CoxBase: an Online Platform for Epidemiological Surveillance, Visualization, Analysis, and Typing of Coxiella burnetii Genomic Sequences von Fasemore, Akinyemi M., Helbich, Andrea, Walter, Mathias C., Dandekar, Thomas, Vergnaud, Gilles, Foerstner, Konrad U., Frangoulidis, Dimitrios

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First Phylogenetic Analysis of Malian SARS-CoV-2 Sequences Provides Molecular Insights into the Genomic Diversity of the Sahel Region von Kouriba, Bourema, Duerr, Angela, Rehn, Alexandra, Sangare, Abdoul Karim, Traore, Brehima Y., Bestehorn-Willmann, Malena S., Ouedraogo, Judicael, Heitzer, Asli, Sogodogo, Elisabeth, Maiga, Abderrhamane, Walter, Mathias C., Zimmermann, Fee, Wolfel, Roman, Antwerpen, Markus H.

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In-Depth Analysis of Bacillus anthracis 16S rRNA Genes and Transcripts Reveals Intra- and Intergenomic Diversity and Facilitates Anthrax Detection von Braun, Peter, Zimmermann, Fee, Walter, Mathias C, Mantel, Sonja, Aistleitner, Karin, Stürz, Inga, Grass, Gregor, Stoecker, Kilian

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Complete Circular Genome Sequence and Temperature Independent Adaptation to Anaerobiosis of Listeria weihenstephanensis DSM 24698 von Ferrari, Elena, Walter, Mathias C, Huptas, Christopher, Scherer, Siegfried, Müller-Herbst, Stefanie

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Microevolution of the chromosomal region of acute disease antigen A (adaA) in the query (Q) fever agent Coxiella burnetii von Frangoulidis, Dimitrios, Splettstoesser, Wolf D, Landt, Olfert, Dehnhardt, Jasmin, Henning, Klaus, Hilbert, Angela, Bauer, Tilman, Antwerpen, Markus, Meyer, Hermann, Walter, Mathias C, Knobloch, Johannes K-M

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Control of Coxiella burnetii shedding in a dairy goat herd by annual offspring vaccination von Bauer, Benjamin U., Herms, T. Louise, Jahnke, Rico, Ossowski, Nina, Walter, Mathias C., Frangoulidis, Dimitrios, Runge, Martin, Ganter, Martin, Knittler, Michael R.

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The Intervening Sequence of Coxiella burnetii: Characterization and Evolution von Warrier, Indu, Walter, Mathias C, Frangoulidis, Dimitrios, Raghavan, Rahul, Hicks, Linda D, Minnick, Michael F

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MinION as part of a biomedical rapidly deployable laboratory von Walter, Mathias C., Zwirglmaier, Katrin, Vette, Philipp, Holowachuk, Scott A., Stoecker, Kilian, Genzel, Gelimer H., Antwerpen, Markus H.

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FlexTaxD: flexible modification of taxonomy databases for improved sequence classification von Sundell, David, Öhrman, Caroline, Svensson, Daniel, Karlsson, Edvin, Brindefalk, Björn, Myrtennäs, Kerstin, Ahlinder, Jon, Antwerpen, Markus H, Walter, Mathias C, Forsman, Mats, Stenberg, Per, Sjödin, Andreas

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Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria von Sipos, György, Prasanna, Arun N., Walter, Mathias C., O’Connor, Eoin, Bálint, Balázs, Krizsán, Krisztina, Kiss, Brigitta, Hess, Jaqueline, Varga, Torda, Slot, Jason, Riley, Robert, Bóka, Bettina, Rigling, Daniel, Barry, Kerrie, Lee, Juna, Mihaltcheva, Sirma, LaButti, Kurt, Lipzen, Anna, Waldron, Rose, Moloney, Nicola M., Sperisen, Christoph, Kredics, László, Vágvölgyi, Csaba, Patrignani, Andrea, Fitzpatrick, David, Nagy, István, Doyle, Sean, Anderson, James B., Grigoriev, Igor V., Güldener, Ulrich, Münsterkötter, Martin, Nagy, László G.

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A headache with surprising outcome: first case of brucellosis caused by Brucella suis biovar 1 in Germany von Zange, Sabine, Schneider, Kim, Georgi, Enrico, Scholz, Holger C., Antwerpen, Markus H., Walter, Mathias C., Zoeller, Lothar, von Buttlar, Heiner, Borde, Johannes P.

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Whole genome sequencing and phylogenetic classification of Tunisian SARS-CoV-2 strains from patients of the Military Hospital in Tunis von Handrick, Susann, Bestehorn-Willmann, Malena, Eckstein, Simone, Walter, Mathias C., Antwerpen, Markus H., Naija, Habiba, Stoecker, Kilian, Wölfel, Roman, Ben Moussa, Mohamed

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HoPaCI-DB: host-Pseudomonas and Coxiella interaction database von Bleves, Sophie, Dunger, Irmtraud, Walter, Mathias C, Frangoulidis, Dimitrios, Kastenmüller, Gabi, Voulhoux, Romé, Ruepp, Andreas

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A complete toolset for the study of Ustilago bromivora and Brachypodium sp. as a fungal-temperate grass pathosystem von Rabe, Franziska, Bosch, Jason, Stirnberg, Alexandra, Guse, Tilo, Bauer, Lisa, Seitner, Denise, Rabanal, Fernando A, Czedik-Eysenberg, Angelika, Uhse, Simon, Bindics, Janos, Genenncher, Bianca, Navarrete, Fernando, Kellner, Ronny, Ekker, Heinz, Kumlehn, Jochen, Vogel, John P, Gordon, Sean P, Marcel, Thierry C, Münsterkötter, Martin, Walter, Mathias C, Sieber, Christian Mk, Mannhaupt, Gertrud, Güldener, Ulrich, Kahmann, Regine, Djamei, Armin

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Sequence-structure relationships in yeast mRNAs von Chursov, Andrey, Walter, Mathias C., Schmidt, Thorsten, Mironov, Andrei, Shneider, Alexander, Frishman, Dmitrij

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