A Support Vector Machine based method to distinguish long non-coding RNAs from protein coding transcripts von Schneider, Hugo W, Raiol, Taina, Brigido, Marcelo M, Walter, Maria Emilia M T, Stadler, Peter F

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Provenance in bioinformatics workflows von de Paula, Renato, Holanda, Maristela, Gomes, Luciana S A, Lifschitz, Sergio, Walter, Maria Emilia M T

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Formalization of Block Pruning: Reducing the Number of Cells Computed in Exact Biological Sequence Comparison Algorithms von Sandes, Edans F O, Teodoro, George L M, Walter, Maria Emilia M T, Martorell, Xavier, Ayguade, Eduard, Melo, Alba C M A

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PlantRNA_Sniffer: A SVM-Based Workflow to Predict Long Intergenic Non-Coding RNAs in Plants von Vieira, Lucas Maciel, Grativol, Clicia, Thiebaut, Flavia, Carvalho, Thais G, Hardoim, Pablo R, Hemerly, Adriana, Lifschitz, Sergio, Ferreira, Paulo Cavalcanti Gomes, Walter, Maria Emilia M T

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Live phylogeny von Telles, Guilherme P, Almeida, Nalvo F, Minghim, Rosane, Walter, Maria Emilia M T

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Transcriptome analysis of the Amazonian viper Bothrops atrox venom gland using expressed sequence tags (ESTs) von Neiva, Márcia, Arraes, Fabricio B.M., de Souza, Jonso Vieira, Rádis-Baptista, Gandhi, Prieto da Silva, Álvaro R.B., Walter, Maria Emilia M.T., Brigido, Marcelo de Macedo, Yamane, Tetsuo, López-Lozano, Jorge Luiz, Astolfi-Filho, Spartaco

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A new 1.375-approximation algorithm for sorting by transpositions von Silva, Luiz Augusto G, Kowada, Luis Antonio B, Rocco, Noraí Romeu, Walter, Maria Emília M T

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CellHeap: A Workflow for Optimizing COVID-19 Single-Cell RNA-Seq Data Processing in the Santos Dumont Supercomputer von Silva, Vanessa S., Costa, Maiana O. C., Castro, Maria Clicia S., Silva, Helena S., Walter, Maria Emilia M. T., Melo, Alba C. M. A., Ocaña, Kary A. C., dos Santos, Marcelo T., Nicolas, Marisa F., Carvalho, Anna Cristina C., Henriques-Pons, Andrea, Silva, Fabrício A. B.

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Are spliced ncRNA host genes distinct classes of lncRNAs? von Sen, Rituparno, Fallmann, Jörg, Walter, Maria Emília M. T., Stadler, Peter F.

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TERribly Difficult: Searching for Telomerase RNAs in Saccharomycetes von Waldl, Maria, Thiel, Bernhard C, Ochsenreiter, Roman, Holzenleiter, Alexander, de Araujo Oliveira, João Victor, Walter, Maria Emília M T, Wolfinger, Michael T, Stadler, Peter F

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Advances in Bioinformatics and Computational Biology: Second Brazilian Symposium on Bioinformatics, BSB 2007, Angra dos Reis, Brazil, August 29-31, 2007 : Proceedings von Istrail, Sorin, Pevzner, Pavel, Waterman, Michael S

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Graph Databases in Molecular Biology von da Silva, Waldeyr M. C., Wercelens, Polyane, Walter, Maria Emília M. T., Holanda, Maristela, Brígido, Marcelo

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Exploring Plant Sesquiterpene Diversity by Generating Chemical Networks von Silva, Waldeyr M. C. da, Andersen, Jakob L., Holanda, Maristela T., Walter, Maria Emília M. T., Brigido, Marcelo M., Stadler, Peter F., Flamm, Christoph

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A Genetic Algorithm for Character State Live Phylogeny von Fernandes, Rafael L., Güths, Rogério, Telles, Guilherme P., Almeida, Nalvo F., Walter, Maria Emília M. T.

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Multi-objective optimization for plant germplasm collection conservation of genetic resources based on molecular variability von Schlottfeldt, Shana, Walter, Maria Emília M. T., de Carvalho, André Carlos P. L. F., Soares, Thannya N., Telles, Mariana P. C., Loyola, Rafael D., Diniz-Filho, José Alexandre F.

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An Argumentation Theory-Based Multiagent Model to Annotate Proteins von Souza, Daniel S., Silva, Waldeyr M. C., Ralha, Célia G., Walter, Maria Emília M. T.

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Computational Simulations for Cyclizations Catalyzed by Plant Monoterpene Synthases von da Silva, Waldeyr Mendes Cordeiro, de Andrade, Daniela P., Andersen, Jakob L., Walter, Maria Emília M. T., Brigido, Marcelo, Stadler, Peter F., Flamm, Christoph

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SOM-PORTRAIT: Identifying Non-coding RNAs Using Self-Organizing Maps von Silva, Tulio C., Berger, Pedro A., Arrial, Roberto T., Togawa, Roberto C., Brigido, Marcelo M., Walter, Maria Emilia M. T.

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Improving the algorithm of Bafna and Pevzner for the problem of sorting by transpositions: a practical approach von Walter, Maria Emilia M.T., Sobrinho, Mauro C., Oliveira, Eugenia T.G., Soares, Lorena S., Oliveira, Adilton G., Martins, Thelmo E.S., Fonseca, Tiago M.

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Venom Gland Peptides of Arthropods from the Brazilian Cerrado Biome Unveiled by Transcriptome Analysis von Guidini, Giovanni M., da Silva, Waldeyr M. C., Camargos, Thalita S., Mourão, Caroline F. B., Galante, Priscilla, Raiol, Tainá, Brígido, Marcelo M., Walter, Maria Emília M. T., Schwartz, Elisabeth N. F.

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