The evolutionary significance of cis -regulatory mutations von Wray, Gregory A

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Human-chimpanzee differences in a FZD8 enhancer alter cell-cycle dynamics in the developing neocortex von Boyd, J Lomax, Skove, Stephanie L, Rouanet, Jeremy P, Pilaz, Louis-Jan, Bepler, Tristan, Gordân, Raluca, Wray, Gregory A, Silver, Debra L

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Molecular clocks and the early evolution of metazoan nervous systems von Wray, Gregory A.

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An early cell shape transition drives evolutionary expansion of the human forebrain von Benito-Kwiecinski, Silvia, Giandomenico, Stefano L., Sutcliffe, Magdalena, Riis, Erlend S., Freire-Pritchett, Paula, Kelava, Iva, Wunderlich, Stephanie, Martin, Ulrich, Wray, Gregory A., McDole, Kate, Lancaster, Madeline A.

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Genomics and the Evolution of Phenotypic Traits von Wray, Gregory A.

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Comparative Developmental Transcriptomics Reveals Rewiring of a Highly Conserved Gene Regulatory Network during a Major Life History Switch in the Sea Urchin Genus Heliocidaris von Israel, Jennifer W, Martik, Megan L, Byrne, Maria, Raff, Elizabeth C, Raff, Rudolf A, McClay, David R, Wray, Gregory A

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Evaluation of chromatin accessibility in prefrontal cortex of individuals with schizophrenia von Bryois, Julien, Garrett, Melanie E., Song, Lingyun, Safi, Alexias, Giusti-Rodriguez, Paola, Johnson, Graham D., Shieh, Annie W., Buil, Alfonso, Fullard, John F., Roussos, Panos, Sklar, Pamela, Akbarian, Schahram, Haroutunian, Vahram, Stockmeier, Craig A., Wray, Gregory A., White, Kevin P., Liu, Chunyu, Reddy, Timothy E., Ashley-Koch, Allison, Sullivan, Patrick F., Crawford, Gregory E.

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Positive selection within the genomes of SARS-CoV-2 and other Coronaviruses independent of impact on protein function von Berrio, Alejandro, Gartner, Valerie, Wray, Gregory A

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Evolutionary Changes in the Chromatin Landscape Contribute to Reorganization of a Developmental Gene Network During Rapid Life History Evolution in Sea Urchins von Davidson, Phillip L, Byrne, Maria, Wray, Gregory A

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Does evolutionary theory need a rethink? von Laland, Kevin, Uller, Tobias, Feldman, Marc, Sterelny, Kim, Müller, Gerd B., Moczek, Armin, Jablonka, Eva, Odling-Smee, John, Wray, Gregory A., Hoekstra, Hopi E., Futuyma, Douglas J., Lenski, Richard E., Mackay, Trudy F. C., Schluter, Dolph, Strassmann, Joan E.

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An RNA interference approach for functional studies in the sea urchin and its use in analysis of nodal signaling gradients von Wilson, Keen, Manner, Carl, Miranda, Esther, Berrio, Alejandro, Wray, Gregory A., McClay, David R.

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Developmental single-cell transcriptomics in the Lytechinus variegatus sea urchin embryo von Massri, Abdull J, Greenstreet, Laura, Afanassiev, Anton, Berrio, Alejandro, Wray, Gregory A, Schiebinger, Geoffrey, McClay, David R

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The impact of gene expression variation on the robustness and evolvability of a developmental gene regulatory network von Garfield, David A, Runcie, Daniel E, Babbitt, Courtney C, Haygood, Ralph, Nielsen, William J, Wray, Gregory A

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Identifying branch-specific positive selection throughout the regulatory genome using an appropriate proxy neutral von Berrio, Alejandro, Haygood, Ralph, Wray, Gregory A

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The hard clam genome reveals massive expansion and diversification of inhibitors of apoptosis in Bivalvia von Song, Hao, Guo, Ximing, Sun, Lina, Wang, Qianghui, Han, Fengming, Wang, Haiyan, Wray, Gregory A, Davidson, Phillip, Wang, Qing, Hu, Zhi, Zhou, Cong, Yu, Zhenglin, Yang, Meijie, Feng, Jie, Shi, Pu, Zhou, Yi, Zhang, Libin, Zhang, Tao

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Hybrid Epigenomes Reveal Extensive Local Genetic Changes to Chromatin Accessibility Contribute to Divergence in Embryonic Gene Expression Between Species von Devens, Hannah R, Davidson, Phillip L, Byrne, Maria, Wray, Gregory A

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Contrasting the development of larval and adult body plans during the evolution of biphasic lifecycles in sea urchins von McDonald, Brennan D, Massri, Abdull J, Berrio, Alejandro, Byrne, Maria, McClay, David R, Wray, Gregory A

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Reprogramming of cells during embryonic transfating: overcoming a reprogramming block von Berrio, Alejandro, Miranda, Esther, Massri, Abdull J, Afanassiev, Anton, Schiebinger, Geoffrey, Wray, Gregory A, McClay, David R

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The PsychENCODE project von Akbarian, Schahram, Liu, Chunyu, Knowles, James A, Vaccarino, Flora M, Farnham, Peggy J, Crawford, Gregory E, Jaffe, Andrew E, Pinto, Dalila, Dracheva, Stella, Geschwind, Daniel H, Mill, Jonathan, Nairn, Angus C, Abyzov, Alexej, Pochareddy, Sirisha, Prabhakar, Shyam, Weissman, Sherman, Sullivan, Patrick F, State, Matthew W, Weng, Zhiping, Peters, Mette A, White, Kevin P, Gerstein, Mark B, Amiri, Anahita, Armoskus, Chris, Ashley-Koch, Allison E, Bae, Taejeong, Beckel-Mitchener, Andrea, Berman, Benjamin P, Coetzee, Gerhard A, Coppola, Gianfilippo, Francoeur, Nancy, Fromer, Menachem, Gao, Robert, Grennan, Kay, Herstein, Jennifer, Kavanagh, David H, Ivanov, Nikolay A, Jiang, Yan, Kitchen, Robert R, Kozlenkov, Alexey, Kundakovic, Marija, Li, Mingfeng, Li, Zhen, Liu, Shuang, Mangravite, Lara M, Mattei, Eugenio, Markenscoff-Papadimitriou, Eirene, Navarro, Fábio C P, North, Nicole, Omberg, Larsson, Panchision, David, Parikshak, Neelroop, Poschmann, Jeremie, Price, Amanda J, Purcaro, Michael, Reddy, Timothy E, Roussos, Panos, Schreiner, Shannon, Scuderi, Soraya, Sebra, Robert, Shibata, Mikihito, Shieh, Annie W, Skarica, Mario, Sun, Wenjie, Swarup, Vivek, Thomas, Amber, Tsuji, Junko, van Bakel, Harm, Wang, Daifeng, Wang, Yongjun, Wang, Kai, Werling, Donna M, Willsey, A Jeremy, Witt, Heather, Won, Hyejung, Wong, Chloe C Y, Wray, Gregory A, Wu, Emily Y, Xu, Xuming, Yao, Lijing, Senthil, Geetha, Lehner, Thomas, Sklar, Pamela, Sestan, Nenad

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Extensive evolutionary changes in regulatory element activity during human origins are associated with altered gene expression and positive selection von Shibata, Yoichiro, Sheffield, Nathan C, Fedrigo, Olivier, Babbitt, Courtney C, Wortham, Matthew, Tewari, Alok K, London, Darin, Song, Lingyun, Lee, Bum-Kyu, Iyer, Vishwanath R, Parker, Stephen C J, Margulies, Elliott H, Wray, Gregory A, Furey, Terrence S, Crawford, Gregory E

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