Interplay between the catabolite repression control protein Crc, Hfq and RNA in Hfq-dependent translational regulation in Pseudomonas aeruginosa von Sonnleitner, Elisabeth, Wulf, Alexander, Campagne, Sébastien, Pei, Xue-Yuan, Wolfinger, Michael T, Forlani, Giada, Prindl, Konstantin, Abdou, Laetitia, Resch, Armin, Allain, Frederic H -T, Luisi, Ben F, Urlaub, Henning, Bläsi, Udo

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Predicting RNA secondary structures from sequence and probing data von Lorenz, Ronny, Wolfinger, Michael T., Tanzer, Andrea, Hofacker, Ivo L.

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SHAPE directed RNA folding von Lorenz, Ronny, Luntzer, Dominik, Hofacker, Ivo L, Stadler, Peter F, Wolfinger, Michael T

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Biophysical characterisation of human LincRNA-p21 sense and antisense Alu inverted repeats von D’Souza, Michael H, Mrozowich, Tyler, Badmalia, Maulik D, Geeraert, Mitchell, Frederickson, Angela, Henrickson, Amy, Demeler, Borries, Wolfinger, Michael T, Patel, Trushar R

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Functional RNA Structures in the 3′UTR of Tick-Borne, Insect-Specific and No-Known-Vector Flaviviruses von Ochsenreiter, Roman, Hofacker, Ivo L., Wolfinger, Michael T.

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Theoretical studies on RNA recognition by Musashi 1 RNA-binding protein von Darai, Nitchakan, Mahalapbutr, Panupong, Wolschann, Peter, Lee, Vannajan Sanghiran, Wolfinger, Michael T., Rungrotmongkol, Thanyada

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Investigating RNA–RNA interactions through computational and biophysical analysis von Mrozowich, Tyler, Park, Sean M, Waldl, Maria, Henrickson, Amy, Tersteeg, Scott, Nelson, Corey R, De Klerk, Anneke, Demeler, Borries, Hofacker, Ivo L, Wolfinger, Michael T, Patel, Trushar R

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Musashi binding elements in Zika and related Flavivirus 3′UTRs: A comparative study in silico von Schneider, Adriano de Bernardi, Wolfinger, Michael T.

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A Structural Refinement Technique for Protein-RNA Complexes Based on a Combination of AI-based Modeling and Flexible Docking: A Study of Musashi-1 Protein von Darai, Nitchakan, Hengphasatporn, Kowit, Wolschann, Peter, Wolfinger, Michael T, Shigeta, Yasuteru, Rungrotmongkol, Thanyada, Harada, Ryuhei

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Functional RNA Structures in the 3'UTR of Tick-Borne, Insect-Specific and No-Known-Vector Flaviviruses von Ochsenreiter, Roman, Hofacker, Ivo L, Wolfinger, Michael T

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The MazF-regulon: a toolbox for the post-transcriptional stress response in Escherichia coli von Sauert, Martina, Wolfinger, Michael T, Vesper, Oliver, Müller, Christian, Byrgazov, Konstantin, Moll, Isabella

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Distinctive Regulation of Carbapenem Susceptibility in Pseudomonas aeruginosa by Hfq von Sonnleitner, Elisabeth, Pusic, Petra, Wolfinger, Michael T., Bläsi, Udo

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General and MicroRNA-Mediated mRNA Degradation Occurs on Ribosome Complexes in Drosophila Cells von Antic, Sanja, Wolfinger, Michael T., Skucha, Anna, Hosiner, Stefanie, Dorner, Silke

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Gene Expression Profiling of Pseudomonas aeruginosa Upon Exposure to Colistin and Tobramycin von Cianciulli Sesso, Anastasia, Lilić, Branislav, Amman, Fabian, Wolfinger, Michael T, Sonnleitner, Elisabeth, Bläsi, Udo

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Cross-regulation by CrcZ RNA controls anoxic biofilm formation in Pseudomonas aeruginosa von Pusic, Petra, Tata, Muralidhar, Wolfinger, Michael T., Sonnleitner, Elisabeth, Häussler, Susanne, Bläsi, Udo

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NMR Structural Profiling of Transcriptional Intermediates Reveals Riboswitch Regulation by Metastable RNA Conformations von Helmling, Christina, Wacker, Anna, Wolfinger, Michael T, Hofacker, Ivo L, Hengesbach, Martin, Fürtig, Boris, Schwalbe, Harald

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TSSAR: TSS annotation regime for dRNA-seq data von Amman, Fabian, Wolfinger, Michael T, Lorenz, Ronny, Hofacker, Ivo L, Stadler, Peter F, Findeiß, Sven

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Rewiring of Gene Expression in Pseudomonas aeruginosa During Diauxic Growth Reveals an Indirect Regulation of the MexGHI-OpmD Efflux Pump by Hfq von Rozner, Marlena, Nukarinen, Ella, Wolfinger, Michael T, Amman, Fabian, Weckwerth, Wolfram, Bläsi, Udo, Sonnleitner, Elisabeth

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Updated Phylogeny of Chikungunya Virus Suggests Lineage-Specific RNA Architecture von Schneider, Adriano de Bernardi, Ochsenreiter, Roman, Hostager, Reilly, Hofacker, Ivo L, Janies, Daniel, Wolfinger, Michael T

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Efficient computation of co-transcriptional RNA-ligand interaction dynamics von Wolfinger, Michael T., Flamm, Christoph, Hofacker, Ivo L.

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