Interpretation of biological experiments changes with evolution of the Gene Ontology and its annotations von Tomczak, Aurelie, Mortensen, Jonathan M., Winnenburg, Rainer, Liu, Charles, Alessi, Dominique T., Swamy, Varsha, Vallania, Francesco, Lofgren, Shane, Haynes, Winston, Shah, Nigam H., Musen, Mark A., Khatri, Purvesh

Volltext

SuperCYP: a comprehensive database on Cytochrome P450 enzymes including a tool for analysis of CYP-drug interactions von Preissner, Saskia, Kroll, Katharina, Dunkel, Mathias, Senger, Christian, Goldsobel, Gady, Kuzman, Daniel, Guenther, Stefan, Winnenburg, Rainer, Schroeder, Michael, Preissner, Robert

Volltext

Feasibility of Prioritizing Drug–Drug-Event Associations Found in Electronic Health Records von Banda, Juan M., Callahan, Alison, Winnenburg, Rainer, Strasberg, Howard R., Cami, Aurel, Reis, Ben Y., Vilar, Santiago, Hripcsak, George, Dumontier, Michel, Shah, Nigam Haresh

Volltext

Drug repurposing by integrated literature mining and drug–gene–disease triangulation von Sun, Peng, Guo, Jiong, Winnenburg, Rainer, Baumbach, Jan

Volltext

A time-indexed reference standard of adverse drug reactions von Harpaz, Rave, Odgers, David, Gaskin, Greg, DuMouchel, William, Winnenburg, Rainer, Bodenreider, Olivier, Ripple, Anna, Szarfman, Ana, Sorbello, Alfred, Horvitz, Eric, White, Ryen W., Shah, Nigam H.

Volltext

PHI-base update: additions to the pathogen-host interaction database von Winnenburg, Rainer, Urban, Martin, Beacham, Andrew, Baldwin, Thomas K, Holland, Sabrina, Lindeberg, Magdalen, Hansen, Hilde, Rawlings, Christopher, Hammond-Kosack, Kim E, Köhler, Jacob

Volltext

Pathogen-Host Interactions Database (PHI-base) Provides Insights into Generic and Novel Themes of Pathogenicity von Baldwin, T.K, Winnenburg, R, Urban, M, Rawlings, C, Koehler, J, Hammond-Kosack, K.E

Volltext

Generalized enrichment analysis improves the detection of adverse drug events from the biomedical literature von Winnenburg, Rainer, Shah, Nigam H

Volltext

U-Index, a dataset and an impact metric for informatics tools and databases von Callahan, Alison, Winnenburg, Rainer, Shah, Nigam H

Volltext

Implementation and relevance of FAIR data principles in biopharmaceutical R&D von Wise, John, de Barron, Alexandra Grebe, Splendiani, Andrea, Balali-Mood, Beeta, Vasant, Drashtti, Little, Eric, Mellino, Gaspare, Harrow, Ian, Smith, Ian, Taubert, Jan, van Bochove, Kees, Romacker, Martin, Walgemoed, Peter, Jimenez, Rafael C., Winnenburg, Rainer, Plasterer, Tom, Gupta, Vibhor, Hedley, Victoria

Volltext

A method for systematic discovery of adverse drug events from clinical notes von Wang, Guan, Jung, Kenneth, Winnenburg, Rainer, Shah, Nigam H

Volltext

Exploring adverse drug events at the class level von Winnenburg, Rainer, Sorbello, Alfred, Bodenreider, Olivier

Volltext

A framework for assessing the consistency of drug classes across sources von Winnenburg, Rainer, Bodenreider, Olivier

Volltext

Desiderata for an authoritative Representation of MeSH in RDF von Winnenburg, Rainer, Bodenreider, Olivier

Volltext

Improved mutation tagging with gene identifiers applied to membrane protein stability prediction von Winnenburg, Rainer, Plake, Conrad, Schroeder, Michael

Volltext

Metrics for assessing the quality of value sets in clinical quality measures von Winnenburg, Rainer, Bodenreider, Olivier

Volltext

PHI-base: a new database for pathogen host interactions von Winnenburg, Rainer, Baldwin, Thomas K., Urban, Martin, Rawlings, Chris, Köhler, Jacob, Hammond-Kosack, Kim E.

Volltext

Issues in creating and maintaining value sets for clinical quality measures von Winnenburg, Rainer, Bodenreider, Olivier

Volltext

Using description logics to evaluate the consistency of drug-class membership relations in NDF-RT von Winnenburg, Rainer, Mortensen, Jonathan M, Bodenreider, Olivier

Volltext

Leveraging MEDLINE indexing for pharmacovigilance – Inherent limitations and mitigation strategies von Winnenburg, Rainer, Sorbello, Alfred, Ripple, Anna, Harpaz, Rave, Tonning, Joseph, Szarfman, Ana, Francis, Henry, Bodenreider, Olivier

Volltext