Computational prediction of gene regulatory networks in plant growth and development von Haque, Samiul, Ahmad, Jabeen S, Clark, Natalie M, Williams, Cranos M, Sozzani, Rosangela

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Cellular clarity: a logistic regression approach to identify root epidermal regulators of iron deficiency response von Schmittling, Selene R, Muhammad, DurreShahwar, Haque, Samiul, Long, Terri A, Williams, Cranos M

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Complete Proteomic-Based Enzyme Reaction and Inhibition Kinetics Reveal How Monolignol Biosynthetic Enzyme Families Affect Metabolic Flux and Lignin in Populus trichocarpa von Wang, Jack P., Naik, Punith P., Chen, Hsi-Chuan, Shi, Rui, Lin, Chien-Yuan, Liu, Jie, Shuford, Christopher M., Li, Quanzi, Sun, Ying-Hsuan, Tunlaya-Anukit, Sermsawat, Williams, Cranos M., Muddiman, David C., Ducoste, Joel J., Sederoff, Ronald R., Chiang, Vincent L.

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Identification of Transcription Factors Regulating SARS-CoV-2 Tropism Factor Expression by Inferring Cell-Type-Specific Transcriptional Regulatory Networks in Human Lungs von Tong, Haonan, Chen, Hao, Williams, Cranos M

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Stem-cell-ubiquitous genes spatiotemporally coordinate division through regulation of stem-cell-specific gene networks von Clark, Natalie M., Buckner, Eli, Fisher, Adam P., Nelson, Emily C., Nguyen, Thomas T., Simmons, Abigail R., de Luis Balaguer, Maria A., Butler-Smith, Tiara, Sheldon, Parnell J., Bergmann, Dominique C., Williams, Cranos M., Sozzani, Rossangela

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Modeling cross-regulatory influences on monolignol transcripts and proteins under single and combinatorial gene knockdowns in Populus trichocarpa von Matthews, Megan L, Wang, Jack P, Sederoff, Ronald, Chiang, Vincent L, Williams, Cranos M

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Internal defect scanning of sweetpotatoes using interactance spectroscopy von Kudenov, Michael W, Scarboro, Clifton G, Altaqui, Ali, Boyette, Mike, Yencho, G Craig, Williams, Cranos M

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Dynamics of BMP signaling and stable gene expression in the early Drosophila embryo von Al Asafen, Hadel, Beseli, Aydin, Chen, Hung-Yuan, Hiremath, Sharva, Williams, Cranos M, Reeves, Gregory T

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Enzyme Complexes of Ptr4CL and PtrHCT Modulate Co-enzyme A Ligation of Hydroxycinnamic Acids for Monolignol Biosynthesis in Populus trichocarpa von Lin, Chien-Yuan, Sun, Yi, Song, Jina, Chen, Hsi-Chuan, Shi, Rui, Yang, Chenmin, Liu, Jie, Tunlaya-Anukit, Sermsawat, Liu, Baoguang, Loziuk, Philip L., Williams, Cranos M., Muddiman, David C., Lin, Ying-Chung Jimmy, Sederoff, Ronald R., Wang, Jack P., Chiang, Vincent L.

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A multiscale model of lignin biosynthesis for predicting bioenergy traits in Populus trichocarpa von Matthews, Megan L., Wang, Jack P., Sederoff, Ronald, Chiang, Vincent L., Williams, Cranos M.

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Monolignol Pathway 4-Coumaric Acid:Coenzyme A Ligases in Populus trichocarpa: Novel Specificity, Metabolic Regulation, and Simulation of Coenzyme A Ligation Fluxes von Chen, Hsi-Chuan, Song, Jina, Williams, Cranos M., Shuford, Christopher M., Liu, Jie, Wang, Jack P., Li, Quanzi, Shi, Rui, Gokce, Emine, Ducoste, Joel, Muddiman, David C., Sederoff, Ronald R., Chiang, Vincent L.

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Computational solutions for modeling and controlling plant response to abiotic stresses: a review with focus on iron deficiency von Tong, Haonan, Madison, Imani, Long, Terri A, Williams, Cranos M

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POPEYE intercellular localization mediates cell-specific iron deficiency responses von Muhammad, DurreShahwar, Clark, Natalie M, Haque, Samiul, Williams, Cranos M, Sozzani, Rosangela, Long, Terri A

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Multiplex CRISPR editing of wood for sustainable fiber production von Sulis, Daniel B, Jiang, Xiao, Yang, Chenmin, Marques, Barbara M, Matthews, Megan L, Miller, Zachary, Lan, Kai, Cofre-Vega, Carlos, Liu, Baoguang, Sun, Runkun, Sederoff, Henry, Bing, Ryan G, Sun, Xiaoyan, Williams, Cranos M, Jameel, Hasan, Phillips, Richard, Chang, Hou-Min, Peszlen, Ilona, Huang, Yung-Yun, Li, Wei, Kelly, Robert M, Sederoff, Ronald R, Chiang, Vincent L, Barrangou, Rodolphe, Wang, Jack P

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Improving wood properties for wood utilization through multi-omics integration in lignin biosynthesis von Wang, Jack P., Matthews, Megan L., Williams, Cranos M., Shi, Rui, Yang, Chenmin, Tunlaya-Anukit, Sermsawat, Chen, Hsi-Chuan, Li, Quanzi, Liu, Jie, Lin, Chien-Yuan, Naik, Punith, Sun, Ying-Hsuan, Loziuk, Philip L., Yeh, Ting-Feng, Kim, Hoon, Gjersing, Erica, Shollenberger, Todd, Shuford, Christopher M., Song, Jina, Miller, Zachary, Huang, Yung-Yun, Edmunds, Charles W., Liu, Baoguang, Sun, Yi, Lin, Ying-Chung Jimmy, Li, Wei, Chen, Hao, Peszlen, Ilona, Ducoste, Joel J., Ralph, John, Chang, Hou-Min, Muddiman, David C., Davis, Mark F., Smith, Chris, Isik, Fikret, Sederoff, Ronald, Chiang, Vincent L.

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Multiscale Modeling of Cross-Regulatory Transcript and Protein Influences von Matthews, Megan L., Williams, Cranos M.

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Directions for research and training in plant omics: Big Questions and Big Data von Argueso, Cristiana T., Assmann, Sarah M., Birnbaum, Kenneth D., Chen, Sixue, Dinneny, José R., Doherty, Colleen J., Eveland, Andrea L., Friesner, Joanna, Greenlee, Vanessa R., Law, Julie A., Marshall‐Colón, Amy, Mason, Grace Alex, O'Lexy, Ruby, Peck, Scott C., Schmitz, Robert J., Song, Liang, Stern, David, Varagona, Marguerite J., Walley, Justin W., Williams, Cranos M.

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Flux modeling for monolignol biosynthesis von Wang, Jack P, Matthews, Megan L, Naik, Punith P, Williams, Cranos M, Ducoste, Joel J, Sederoff, Ronald R, Chiang, Vincent L

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Functional redundancy of the two 5-hydroxylases in monolignol biosynthesis of Populus trichocarpa: LC-MS/MS based protein quantification and metabolic flux analysis von Wang, Jack P., Shuford, Christopher M., Li, Quanzi, Song, Jina, Lin, Ying-Chung, Sun, Ying-Hsuan, Chen, Hsi-Chuan, Williams, Cranos M., Muddiman, David C., Sederoff, Ronald R., Chiang, Vincent L.

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Computer vision approach to characterize size and shape phenotypes of horticultural crops using high-throughput imagery von Haque, Samiul, Lobaton, Edgar, Nelson, Natalie, Yencho, G. Craig, Pecota, Kenneth V., Mierop, Russell, Kudenov, Michael W., Boyette, Mike, Williams, Cranos M.

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