Genome-wide nucleosome mapping of Plasmodium falciparum reveals histone-rich coding and histone-poor intergenic regions and chromatin remodeling of core and subtelomeric genes von Westenberger, Scott J, Cui, Long, Dharia, Neekesh, Winzeler, Elizabeth, Cui, Liwang

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A systems-based analysis of Plasmodium vivax lifecycle transcription from human to mosquito von Westenberger, Scott J, McClean, Colleen M, Chattopadhyay, Rana, Dharia, Neekesh V, Carlton, Jane M, Barnwell, John W, Collins, William E, Hoffman, Stephen L, Zhou, Yingyao, Vinetz, Joseph M, Winzeler, Elizabeth A

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Whole-genome sequencing and microarray analysis of ex vivo Plasmodium vivax reveal selective pressure on putative drug resistance genes von Dharia, Neekesh V., Bright, A. Taylor, Westenberger, Scott J., Barnes, S. Whitney, Batalov, Serge, Kuhen, Kelli, Borboa, Rachel, Federe, Glenn C., McClean, Colleen M., Vinetz, Joseph M., Neyra, Victor, Llanos-Cuentas, Alejandro, Barnwell, John W., Walker, John R., Winzeler, Elizabeth A., James, Anthony A.

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Use of high-density tiling microarrays to identify mutations globally and elucidate mechanisms of drug resistance in Plasmodium falciparum von Dharia, Neekesh V, Sidhu, Amar Bir Singh, Cassera, María Belén, Westenberger, Scott J, Bopp, Selina Er, Eastman, Rich T, Plouffe, David, Batalov, Serge, Park, Daniel J, Volkman, Sarah K, Wirth, Dyann F, Zhou, Yingyao, Fidock, David A, Winzeler, Elizabeth A

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Two Hybridization Events Define the Population Structure of Trypanosoma cruzi von Westenberger, Scott J, Barnabe, Christian, Campbell, David A, Sturm, Nancy R

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Trypanosoma cruzi mitochondrial maxicircles display species- and strain-specific variation and a conserved element in the non-coding region von Westenberger, Scott J, Cerqueira, Gustavo C, El-Sayed, Najib M, Zingales, Bianca, Campbell, David A, Sturm, Nancy R

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A population study of the minicircles in Trypanosoma cruzi: predicting guide RNAs in the absence of empirical RNA editing von Thomas, Sean, Martinez, L L Isadora Trejo, Westenberger, Scott J, Sturm, Nancy R

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Evidence-based annotation of the malaria parasite's genome using comparative expression profiling von Zhou, Yingyao, Ramachandran, Vandana, Kumar, Kota Arun, Westenberger, Scott, Refour, Phillippe, Zhou, Bin, Li, Fengwu, Young, Jason A, Chen, Kaisheng, Plouffe, David, Henson, Kerstin, Nussenzweig, Victor, Carlton, Jane, Vinetz, Joseph M, Duraisingh, Manoj T, Winzeler, Elizabeth A

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Evidence for multiple hybrid groups in Trypanosoma cruzi von Sturm, Nancy R, Vargas, Nancy S, Westenberger, Scott J, Zingales, Bianca, Campbell, David A

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Trypanosoma cruzi 5S rRNA arrays define five groups and indicate the geographic origins of an ancestor of the heterozygous hybrids von Westenberger, Scott J., Sturm, Nancy R., Campbell, David A.

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Intragenomic spliced leader RNA array analysis of kinetoplastids reveals unexpected transcribed region diversity in Trypanosoma cruzi von Thomas, Sean, Westenberger, Scott J., Campbell, David A., Sturm, Nancy R.

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Discovery and Barcoding by Analysis of Spliced Leader RNA Gene Sequences of New Isolates of Trypanosomatidae from Heteroptera in Costa Rica and Ecuador von MASLOV, DMITRI A, WESTENBERGER, SCOTT J, XU, XING, CAMPBELL, DAVID A, STURM, NANCY R

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First-Generation Linkage Map of the Gray, Short-Tailed Opossum, Monodelphis domestica, Reveals Genome-Wide Reduction in Female Recombination Rates von Samollow, Paul B, Kammerer, Candace M, Mahaney, Susan M, Schneider, Jennifer L, Westenberger, Scott J, VandeBerg, John L, Robinson, Edward S

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Diversity of Insect Trypanosomatids Assessed from the Spliced Leader RNA and 5s rRNA Genes and Intergenic Regions von PODLIPAEV, SERGEI A., STURM, NANCY R., FIALA, IVAN, FERNANDES, OCTAVIO, WESTENBERGER, SCOTT J., DOLLET, MICHEL, CAMPBELL, DAVID A., LUKEŠ, JULIUS

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Plant-Like Kinase in Plasmodium falciparum Regulates Parasite Egress from Erythrocytes von Dvorin, Jeffrey D, Martyn, Derek C, Patel, Saurabh D, Grimley, Joshua S, Collins, Christine R, Hopp, Christine S, Bright, A. Taylor, Westenberger, Scott, Winzeler, Elizabeth, Blackman, Michael J, Baker, David A, Wandless, Thomas J, Duraisingh, Manoj T

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Differential transcription profiles in Trypanosoma cruzi associated with clinical forms of Chagas disease: Maxicircle NADH dehydrogenase subunit 7 gene truncation in asymptomatic p... von Baptista, Cassio S., Vêncio, Ricardo Z.N., Abdala, Sarah, Carranza, Julio César, Westenberger, Scott J., Silva, Marcelo N., Pereira, Carlos A. de B., Galvão, Lúcia M.C., Gontijo, Eliane D., Chiari, Egler, Sturm, Nancy R., Zingales, Bianca

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Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas Disease von El-Sayed, Najib M, Myler, Peter J, Bartholomeu, Daniella C, Nilsson, Daniel, Aggarwal, Gautam, Tran, Anh-Nhi, Ghedin, Elodie, Worthey, Elizabeth A, Delcher, Arthur L, Blandin, Gae̊lle, Westenberger, Scott J, Caler, Elisabet, Cerqueira, Gustavo C, Branche, Carole, Haas, Brian, Anupama, Atashi, Arner, Erik, Åslund, Lena, Attipoe, Philip, Bontempi, Esteban, Bringaud, Frédéric, Burton, Peter, Cadag, Eithon, Campbell, David A, Carrington, Mark, Crabtree, Jonathan, Darban, Hamid, da Silveira, Jose Franco, de Jong, Pieter, Edwards, Kimberly, Englund, Paul T, Fazelina, Gholam, Feldblyum, Tamara, Ferella, Marcela, Frasch, Alberto Carlos, Gull, Keith, Horn, David, Hou, Lihua, Huang, Yiting, Kindlund, Ellen, Klingbeil, Michele, Kluge, Sindy, Koo, Hean, Lacerda, Daniela, Levin, Mariano J, Lorenzi, Hernan, Louie, Tin, Machado, Carlos Renato, McCulloch, Richard, McKenna, Alan, Mizuno, Yumi, Mottram, Jeremy C, Nelson, Siri, Ochaya, Stephen, Osoegawa, Kazutoyo, Pai, Grace, Parsons, Marilyn, Pentony, Martin, Pettersson, Ulf, Pop, Mihai, Ramirez, Jose Luis, Rinta, Joel, Robertson, Laura, Salzberg, Steven L, Sanchez, Daniel O, Seyler, Amber, Sharma, Reuben, Shetty, Jyoti, Simpson, Anjana J, Sisk, Ellen, Tammi, Martti T, Tarleton, Rick, Teixeira, Santuza, Van Aken, Susan, Vogt, Christy, Ward, Pauline N, Wickstead, Bill, Wortman, Jennifer, White, Owen, Fraser, Claire M, Stuart, Kenneth D, Andersson, Björn

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Comparative Genomics of Trypanosomatid Parasitic Protozoa von El-Sayed, Najib M, Myler, Peter J, Blandin, Gae̊lle, Berriman, Matthew, Crabtree, Jonathan, Aggarwal, Gautam, Caler, Elisabet, Renauld, Hubert, Worthey, Elizabeth A, Hertz-Fowler, Christiane, Ghedin, Elodie, Peacock, Christopher, Bartholomeu, Daniella C, Haas, Brian J, Tran, Anh-Nhi, Wortman, Jennifer R, Alsmark, U. Cecilia M, Angiuoli, Samuel, Anupama, Atashi, Badger, Jonathan, Bringaud, Frederic, Cadag, Eithon, Carlton, Jane M, Cerqueira, Gustavo C, Creasy, Todd, Delcher, Arthur L, Djikeng, Appolinaire, Embley, T. Martin, Hauser, Christopher, Ivens, Alasdair C, Kummerfeld, Sarah K, Pereira-Leal, Jose B, Nilsson, Daniel, Peterson, Jeremy, Salzberg, Steven L, Shallom, Joshua, Silva, Joana C, Sundaram, Jaideep, Westenberger, Scott, White, Owen, Melville, Sara E, Donelson, John E, Andersson, Björn, Stuart, Kenneth D, Hall, Neil

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Development, inheritance, and linkage-group assignment of 60 novel microsatellite markers for the gray, short-tailed opossum Monodelphis domestica von Gouin, Nicolas, Westenberger, Scott J, Mahaney, Susan M, Lindley, Peter, VandeBerg, John L, Samollow, Paul B

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Diversity of Insect Trypanosomatids Assessed from the Spliced Leader RNA and 5S rRNA Genes and Intergenic Regions1 von PODLIPAEV, SERGEI A, STURM, NANCY R, FIALA, IVAN, FERNANDES, OCTAVIO, WESTENBERGER, SCOTT J, DOLLET, MICHEL, CAMPBELL, DAVID A, LUKEŠ, JULIUS

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