RosettaAntibodyDesign (RAbD): A general framework for computational antibody design von Adolf-Bryfogle, Jared, Kalyuzhniy, Oleks, Kubitz, Michael, Weitzner, Brian D, Hu, Xiaozhen, Adachi, Yumiko, Schief, William R, Dunbrack, Jr, Roland L

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Benchmarking and analysis of protein docking performance in Rosetta v3.2 von Chaudhury, Sidhartha, Berrondo, Monica, Weitzner, Brian D, Muthu, Pravin, Bergman, Hannah, Gray, Jeffrey J

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Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE) von Lyskov, Sergey, Chou, Fang-Chieh, Conchúir, Shane Ó, Der, Bryan S, Drew, Kevin, Kuroda, Daisuke, Xu, Jianqing, Weitzner, Brian D, Renfrew, P Douglas, Sripakdeevong, Parin, Borgo, Benjamin, Havranek, James J, Kuhlman, Brian, Kortemme, Tanja, Bonneau, Richard, Gray, Jeffrey J, Das, Rhiju

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Accurate Structure Prediction of CDR H3 Loops Enabled by a Novel Structure-Based C-Terminal Constraint von Weitzner, Brian D, Gray, Jeffrey J

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The Origin of CDR H3 Structural Diversity von Weitzner, Brian D., Dunbrack, Roland L., Gray, Jeffrey J.

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I am a United Academic Worker von Weitzner, Brian D

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A computational method for design of connected catalytic networks in proteins von Weitzner, Brian D., Kipnis, Yakov, Daniel, A. Gerard, Hilvert, Donald, Baker, David

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Modeling and docking of antibody structures with Rosetta von Weitzner, Brian D, Jeliazkov, Jeliazko R, Lyskov, Sergey, Marze, Nicholas, Kuroda, Daisuke, Frick, Rahel, Adolf-Bryfogle, Jared, Biswas, Naireeta, Dunbrack, Roland L, Gray, Jeffrey J

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De novo design of potent and selective mimics of IL-2 and IL-15 von Silva, Daniel-Adriano, Yu, Shawn, Ulge, Umut Y., Spangler, Jamie B., Jude, Kevin M., Labão-Almeida, Carlos, Ali, Lestat R., Quijano-Rubio, Alfredo, Ruterbusch, Mikel, Leung, Isabel, Biary, Tamara, Crowley, Stephanie J., Marcos, Enrique, Walkey, Carl D., Weitzner, Brian D., Pardo-Avila, Fátima, Castellanos, Javier, Carter, Lauren, Stewart, Lance, Riddell, Stanley R., Pepper, Marion, Bernardes, Gonçalo, Dougan, Michael, Garcia, K. Christopher, Baker, David

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Blind prediction performance of RosettaAntibody 3.0: Grafting, relaxation, kinematic loop modeling, and full CDR optimization von Weitzner, Brian D., Kuroda, Daisuke, Marze, Nicholas, Xu, Jianqing, Gray, Jeffrey J.

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Anchor extension: a structure-guided approach to design cyclic peptides targeting enzyme active sites von Hosseinzadeh, Parisa, Watson, Paris R., Craven, Timothy W., Li, Xinting, Rettie, Stephen, Pardo-Avila, Fátima, Bera, Asim K., Mulligan, Vikram Khipple, Lu, Peilong, Ford, Alexander S., Weitzner, Brian D., Stewart, Lance J., Moyer, Adam P., Di Piazza, Maddalena, Whalen, Joshua G., Greisen, Per Jr, Christianson, David W., Baker, David

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Real-time PyMOL visualization for Rosetta and PyRosetta von Baugh, Evan H, Lyskov, Sergey, Weitzner, Brian D, Gray, Jeffrey J

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The influence of proline isomerization on potency and stability of anti-HIV antibody 10E8 von Guttman, Miklos, Padte, Neal N., Huang, Yaoxing, Yu, Jian, Rocklin, Gabriel J., Weitzner, Brian D., Scian, Michele, Ho, David D., Lee, Kelly K.

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A Framework to Simplify Combined Sampling Strategies in Rosetta von Porter, Justin R, Weitzner, Brian D, Lange, Oliver F

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Better together: Elements of successful scientific software development in a distributed collaborative community von Koehler Leman, Julia, Weitzner, Brian D, Renfrew, P Douglas, Lewis, Steven M, Moretti, Rocco, Watkins, Andrew M, Mulligan, Vikram Khipple, Lyskov, Sergey, Adolf-Bryfogle, Jared, Labonte, Jason W, Krys, Justyna, Bystroff, Christopher, Schief, William, Gront, Dominik, Schueler-Furman, Ora, Baker, David, Bradley, Philip, Dunbrack, Roland, Kortemme, Tanja, Leaver-Fay, Andrew, Strauss, Charlie E M, Meiler, Jens, Kuhlman, Brian, Gray, Jeffrey J, Bonneau, Richard

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Integration of the Rosetta suite with the python software stack via reproducible packaging and core programming interfaces for distributed simulation von Ford, Alexander S., Weitzner, Brian D., Bahl, Christopher D.

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An Integrated Framework Advancing Membrane Protein Modeling and Design von Alford, Rebecca F, Koehler Leman, Julia, Weitzner, Brian D, Duran, Amanda M, Tilley, Drew C, Elazar, Assaf, Gray, Jeffrey J

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WORKING LIFE: I am a United Academic Worker von Weitzner, Brian D.

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Macromolecular modeling and design in Rosetta: recent methods and frameworks von Leman, Julia Koehler, Weitzner, Brian D., Lewis, Steven M., Adolf-Bryfogle, Jared, Alam, Nawsad, Alford, Rebecca F., Aprahamian, Melanie, Baker, David, Barlow, Kyle A., Basanta, Benjamin, Bender, Brian J., Blacklock, Kristin, Bonet, Jaume, Boyken, Scott E., Bradley, Phil, Bystroff, Chris, Conway, Patrick, Cooper, Seth, Correia, Bruno E., Coventry, Brian, Das, Rhiju, DiMaio, Frank, Dsilva, Lorna, Dunbrack, Roland, Ford, Alexander S., Fu, Darwin Y., Geniesse, Caleb, Goldschmidt, Lukasz, Gowthaman, Ragul, Gray, Jeffrey J., Gront, Dominik, Guffy, Sharon, Huang, Po-Ssu, Jacobs, Tim M., Jeliazkov, Jeliazko R., Johnson, David K., Kappel, Kalli, Karanicolas, John, Khakzad, Hamed, Khar, Karen R., Khare, Sagar D., Khatib, Firas, Khramushin, Alisa, King, Indigo C., Kleffner, Robert, Koepnick, Brian, Kortemme, Tanja, Kuenze, Georg, Kuhlman, Brian, Kuroda, Daisuke, Labonte, Jason W., Lai, Jason K., Lapidoth, Gideon, Leaver-Fay, Andrew, Lindert, Steffen, Linsky, Thomas, London, Nir, Lubin, Joseph H., Lyskov, Sergey, Maguire, Jack, Malmström, Lars, Marcos, Enrique, Marcu, Orly, Marze, Nicholas A., Meiler, Jens, Moretti, Rocco, Mulligan, Vikram Khipple, Nerli, Santrupti, Norn, Christoffer, Ollikainen, Noah, Ovchinnikov, Sergey, Pacella, Michael S., Pan, Xingjie, Park, Hahnbeom, Pavlovicz, Ryan E., Pethe, Manasi, Pilla, Kala Bharath, Raveh, Barak, Renfrew, P. Douglas, Burman, Shourya S. Roy, Rubenstein, Aliza, Sauer, Marion F., Scheck, Andreas, Schief, William, Schueler-Furman, Ora, Sedan, Yuval, Sevy, Alexander M., Sgourakis, Nikolaos G., Shi, Lei, Siegel, Justin B., Silva, Daniel-Adriano, Smith, Shannon, Song, Yifan, Stein, Amelie, Szegedy, Maria, Teets, Frank D., Thyme, Summer B., Wang, Ray Yu-Ruei, Watkins, Andrew, Zimmerman, Lior

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1047 Protein design and inducible expression allow context-dependent, localized IL-12 activity to enhance solid tumor T cell therapies von Davenport, Thaddeus M, Huang, Szu-han, Moffett, Howell, Weitzner, Brian D, Cassereau, Luke, Baker, Laura E, Hammerson, Bradley, Zhuang, Summer, Saechao, Christine, Song, Lisa, Mimms, Jade, Chian, David, Sims, Candace, Hiraragi, Hajime, Lajoie, Marc J, Boldajipour, Bijan, Boyken, Scott E

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