Phylogenomics of Lophotrochozoa with Consideration of Systematic Error von Kocot, Kevin M., Struck, Torsten H., Merkel, Julia, Watts, Damien S., Todt, Christiane, Brannock, Pamela M., Weese, David A., Cannon, Johanna T., Moroz, Leonid L., Lieb, Bernhard, Halanych, Kenneth M.

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SeqAn an efficient, generic C++ library for sequence analysis von Döring, Andreas, Weese, David, Rausch, Tobias, Reinert, Knut

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CIDANE: comprehensive isoform discovery and abundance estimation von Canzar, Stefan, Andreotti, Sandro, Weese, David, Reinert, Knut, Klau, Gunnar W

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Fiona: a parallel and automatic strategy for read error correction von Schulz, Marcel H, Weese, David, Holtgrewe, Manuel, Dimitrova, Viktoria, Niu, Sijia, Reinert, Knut, Richard, Hugues

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Phenotypic Comparability from Genotypic Variability among Physically Structured Microbial Consortia von Hoffman, Stephanie K, Seitz, Kiley W, Havird, Justin C, Weese, David A, Santos, Scott R

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Diversity and the environmental drivers of spatial variation in Bacteria and micro-Eukarya communities from the Hawaiian anchialine ecosystem von Hoffman, Stephanie K., Seitz, Kiley W., Havird, Justin C., Weese, David A., Santos, Scott R.

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Demographic response of cutlassfish (Trichiurus japonicus and T. nanhaiensis) to fluctuating palaeo-climate and regional oceanographic conditions in the China seas von He, Lijun, Zhang, Aibing, Weese, David, Li, Shengfa, Li, Jiansheng, Zhang, Jing

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Multiple Colonizations Lead to Cryptic Biodiversity in an Island Ecosystem: Comparative Phylogeography of Anchialine Shrimp Species in the Ryukyu Archipelago, Japan von WEESE, DAVID A., FUJIT, YOSHIHISA, SANTOS, SCOTT R.

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Rocks and clocks: linking geologic history and rates of genetic differentiation in anchialine organisms von Santos, Scott R., Weese, David A.

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Looking for needles in a haystack: molecular identification of anchialine crustacean larvae (Decapoda: Caridea) from the Shiokawa Spring, Okinawa Island, Ryukyu Islands, Japan von Weese, David A, Fujita, Yoshihisa, Santos, Scott R

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Genomic Resources Notes Accepted 1 August 2014-30 September 2014 von Arthofer, Wolfgang, Banbury, B. L., Carneiro, Miguel, Cicconardi, Francesco, Duda, Thomas F., Harris, R. B., Kang, David S., Leaché, A. D., Nolte, Viola, Nourisson, Coralie, Palmieri, Nicola, Schlick-Steiner, Birgit C., Schlötterer, Christian, Sequeira, Fernando, Sim, Cheolho, Steiner, Florian M., Vallinoto, Marcelo, Weese, David A.

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Fast and accurate read mapping with approximate seeds and multiple backtracking von Siragusa, Enrico, Weese, David, Reinert, Knut

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Biogeographic role of the Indonesian Seaway implicated by colonization history of purpleback flying squid, Sthenoteuthis oualaniensis (Lesson, 1830), in the Indo-Pacific Ocean von He, Lijun, Xu, Shasha, Weese, David A., Zhang, Jie, Ren, Huimin, Tang, Fenghua, Sha, Zhongli, Zhang, Jing

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Alignment of Next-Generation Sequencing Reads von Reinert, Knut, Langmead, Ben, Weese, David, Evers, Dirk J

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The SeqAn C++ template library for efficient sequence analysis: A resource for programmers von Reinert, Knut, Dadi, Temesgen Hailemariam, Ehrhardt, Marcel, Hauswedell, Hannes, Mehringer, Svenja, Rahn, René, Kim, Jongkyu, Pockrandt, Christopher, Winkler, Jörg, Siragusa, Enrico, Urgese, Gianvito, Weese, David

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Genetic Signature of River Capture Imprinted in Schizopygopsis Fish from the Eastern Tibetan Plateau von He, Lijun, Bi, Yonghong, Weese, David, Wu, Jie, Xu, Shasha, Ren, Huimin, Zhang, Fenfen, Liu, Xueqing, Chen, Lei, Zhang, Jing

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Francisella orientalis DNA detected in feral tilapia populations in Hawai'i von Klinger-Bowen, RuthEllen, Yamasaki, Lei S, Iwai, Jr, Thomas, Peppers, Daquille, Fowler, Caroline, Yacoub, Jordan, Weese, David, Odani, Jenee, Wong, Michael

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Detecting genomic indel variants with exact breakpoints in single- and paired-end sequencing data using SplazerS von EMDE, Anne-Katrin, SCHULZ, Marcel H, WEESE, David, RUPING SUN, VINGRON, Martin, KALSCHEUER, Vera M, HAAS, Stefan A, REINERT, Knut

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Population structure of the Atlantic sand fiddler crab Uca pugilator along the eastern coast of US revealed by molecular data von Weese, David A., Mclain, Denson K., Pratt, Ann E., Fang, Quentin Q.

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Late Pleistocene population expansion of Scylla paramamosain along the coast of China: A population dynamic response to the Last Interglacial sea level highstand von He, Lijun, Zhang, Aibing, Weese, David, Zhu, Chaodong, Jiang, Chaojun, Qiao, Zhenguo

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