MusiteDeep: a deep-learning framework for general and kinase-specific phosphorylation site prediction von Wang, Duolin, Zeng, Shuai, Xu, Chunhui, Qiu, Wangren, Liang, Yanchun, Joshi, Trupti, Xu, Dong

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Single-cell biological network inference using a heterogeneous graph transformer von Ma, Anjun, Wang, Xiaoying, Li, Jingxian, Wang, Cankun, Xiao, Tong, Liu, Yuntao, Cheng, Hao, Wang, Juexin, Li, Yang, Chang, Yuzhou, Li, Jinpu, Wang, Duolin, Jiang, Yuexu, Su, Li, Xin, Gang, Gu, Shaopeng, Li, Zihai, Liu, Bingqiang, Xu, Dong, Ma, Qin

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MusiteDeep: a deep-learning based webserver for protein post-translational modification site prediction and visualization von Wang, Duolin, Liu, Dongpeng, Yuchi, Jiakang, He, Fei, Jiang, Yuexu, Cai, Siteng, Li, Jingyi, Xu, Dong

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Phenotype Prediction and Genome-Wide Association Study Using Deep Convolutional Neural Network of Soybean von Liu, Yang, Wang, Duolin, He, Fei, Wang, Juexin, Joshi, Trupti, Xu, Dong

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Prediction of Protein Ion-Ligand Binding Sites with ELECTRA von Essien, Clement, Jiang, Lei, Wang, Duolin, Xu, Dong

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Semi-Supervised Contrastive Learning for Few-Shot Segmentation of Remote Sensing Images von Chen, Yadang, Wei, Chenchen, Wang, Duolin, Ji, Chuanjun, Li, Baozhu

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Spatial-Aware Transformer (SAT): Enhancing Global Modeling in Transformer Segmentation for Remote Sensing Images von Wang, Duolin, Chen, Yadang, Naz, Bushra, Sun, Le, Li, Baozhu

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Computational methods for protein localization prediction von Jiang, Yuexu, Wang, Duolin, Wang, Weiwei, Xu, Dong

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MULocDeep: A deep-learning framework for protein subcellular and suborganellar localization prediction with residue-level interpretation von Jiang, Yuexu, Wang, Duolin, Yao, Yifu, Eubel, Holger, Künzler, Patrick, Møller, Ian Max, Xu, Dong

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Amniotes co-opt intrinsic genetic instability to protect germ-line genome integrity von Sun, Yu H., Cui, Hongxiao, Song, Chi, Shen, Jiafei Teng, Zhuo, Xiaoyu, Wang, Ruoqiao Huiyi, Yu, Xiaohui, Ndamba, Rudo, Mu, Qian, Gu, Hanwen, Wang, Duolin, Murthy, Gayathri Guru, Li, Pidong, Liang, Fan, Liu, Lei, Tao, Qing, Wang, Ying, Orlowski, Sara, Xu, Qi, Zhou, Huaijun, Jagne, Jarra, Gokcumen, Omer, Anthony, Nick, Zhao, Xin, Li, Xin Zhiguo

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Using Artificial Intelligence to Generate Master-Quality Architectural Designs from Text Descriptions von Chen, Junming, Wang, Duolin, Shao, Zichun, Zhang, Xu, Ruan, Mengchao, Li, Huiting, Li, Jiaqi

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A contrastive learning approach to integrate spatial transcriptomics and histological images von Lin, Yu, Liang, Yanchun, Wang, Duolin, Chang, Yuzhou, Ma, Qin, Wang, Yan, He, Fei, Xu, Dong

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Capsule network for protein post-translational modification site prediction von Wang, Duolin, Liang, Yanchun, Xu, Dong

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Global video object segmentation with spatial constraint module von Chen, Yadang, Wang, Duolin, Chen, Zhiguo, Yang, Zhi-Xin, Wu, Enhua

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MU-PseUDeep: A deep learning method for prediction of pseudouridine sites von Khan, Saad M., He, Fei, Wang, Duolin, Chen, Yongbing, Xu, Dong

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DM3Loc: multi-label mRNA subcellular localization prediction and analysis based on multi-head self-attention mechanism von Wang, Duolin, Zhang, Zhaoyue, Jiang, Yuexu, Mao, Ziting, Wang, Dong, Lin, Hao, Xu, Dong

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A Pretrained ELECTRA Model for Kinase-Specific Phosphorylation Site Prediction von Jiang, Lei, Wang, Duolin, Xu, Dong

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Eliciting knowledge from language models with automatically generated continuous prompts von Chen, Yadang, Yang, Gang, Wang, Duolin, Li, Dichao

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RNALocate v2.0: an updated resource for RNA subcellular localization with increased coverage and annotation von Cui, Tianyu, Dou, Yiying, Tan, Puwen, Ni, Zhen, Liu, Tianyuan, Wang, DuoLin, Huang, Yan, Cai, Kaican, Zhao, Xiaoyang, Xu, Dong, Lin, Hao, Wang, Dong

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A dynamic programing approach to integrate gene expression data and network information for pathway model generation von Jiang, Yuexu, Liang, Yanchun, Wang, Duolin, Xu, Dong, Joshi, Trupti

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