Truvari: refined structural variant comparison preserves allelic diversity von English, Adam C, Menon, Vipin K, Gibbs, Richard A, Metcalf, Ginger A, Sedlazeck, Fritz J

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Identification of allele-specific KIV-2 repeats and impact on Lp(a) measurements for cardiovascular disease risk von Behera, Sairam, Belyeu, Jonathan R, Chen, Xiao, Paulin, Luis F, Nguyen, Ngoc Quynh H, Newman, Emma, Mahmoud, Medhat, Menon, Vipin K, Qi, Qibin, Joshi, Parag, Marcovina, Santica, Rossi, Massimiliano, Roller, Eric, Han, James, Onuchic, Vitor, Avery, Christy L, Ballantyne, Christie M, Rodriguez, Carlos J, Kaplan, Robert C, Muzny, Donna M, Metcalf, Ginger A, Gibbs, Richard A, Yu, Bing, Boerwinkle, Eric, Eberle, Michael A, Sedlazeck, Fritz J

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Modeling nonsegmented negative-strand RNA virus (NNSV) transcription with ejective polymerase collisions and biased diffusion von Piedra, Felipe-Andrés, Henke, David, Rajan, Anubama, Muzny, Donna M, Doddapaneni, Harsha, Menon, Vipin K, Hoffman, Kristi L, Ross, Matthew C, Javornik Cregeen, Sara J, Metcalf, Ginger, Gibbs, Richard A, Petrosino, Joseph F, Avadhanula, Vasanthi, Piedra, Pedro A

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Unveiling microbial diversity: harnessing long-read sequencing technology von Agustinho, Daniel P., Fu, Yilei, Menon, Vipin K., Metcalf, Ginger A., Treangen, Todd J., Sedlazeck, Fritz J.

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Rare Variants in Genes Encoding Subunits of the Epithelial Na + Channel Are Associated With Blood Pressure and Kidney Function von Blobner, Brandon M., Kirabo, Annet, Kashlan, Ossama B., Sheng, Shaohu, Arnett, Donna K., Becker, Lewis C., Boerwinkle, Eric, Carlson, Jenna C., Gao, Yan, Gibbs, Richard A., He, Jiang, Irvin, Marguerite R., Kardia, Sharon L.R., Kelly, Tanika N., Kooperberg, Charles, McGarvey, Stephen T., Menon, Vipin K., Montasser, May E., Naseri, Take, Redline, Susan, Reiner, Alexander P., Reupena, Muagututi‘a S., Smith, Jennifer A., Sun, Xiao, Vaidya, Dhananjay, Viaud-Martinez, Karine A., Weeks, Daniel E., Yanek, Lisa R., Zhu, Xiaofeng, Minster, Ryan L., Kleyman, Thomas R.

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Drivers of transcriptional variance in human intestinal epithelial organoids von Criss, 2nd, Zachary K, Bhasin, Nobel, Di Rienzi, Sara C, Rajan, Anubama, Deans-Fielder, Kali, Swaminathan, Ganesh, Kamyabi, Nabiollah, Zeng, Xi-Lei, Doddapaneni, Harsha, Menon, Vipin K, Chakravarti, Deepavali, Estrella, Clarissa, Yu, Xiaomin, Patil, Ketki, Petrosino, Joseph F, Fleet, James C, Verzi, Michael P, Christakos, Sylvia, Helmrath, Michael A, Arimura, Sumimasa, DePinho, Ronald A, Britton, Robert A, Maresso, Anthony W, Grande-Allen, K Jane, Blutt, Sarah E, Crawford, Sue E, Estes, Mary K, Ramani, Sasirekha, Shroyer, Noah F

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Fully resolved assembly of Cryptosporidium parvum von Menon, Vipin K, Okhuysen, Pablo C, Chappell, Cynthia L, Mahmoud, Medhat, Mahmoud, Medhat, Meng, Qingchang, Doddapaneni, Harsha, Vee, Vanesa, Han, Yi, Salvi, Sejal, Bhamidipati, Sravya, Kottapalli, Kavya, Weissenberger, George, Shen, Hua, Ross, Matthew C, Hoffman, Kristi L, Cregeen, Sara Javornik, Muzny, Donna M, Metcalf, Ginger A, Gibbs, Richard A, Petrosino, Joseph F, Sedlazeck, Fritz J

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Symptomatic and Asymptomatic Cryptosporidium Infections in Children in a Semi-Urban Slum Community in Southern India von AJJAMPUR, Sitara S. R, SARKAR, Rajiv, SANKARAN, Premi, KANNAN, Arun, MENON, Vipin K, MULIYIL, Jayaprakash, WARD, Honorine, KANG, Gagandeep

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Rare Genetic Variants Associated With Sudden Cardiac Arrest in the Young: A Prospective, Population-Based Study von Holmstrom, Lauri, Chaudhary, Ninad S., Nakamura, Kotoka, Chugh, Harpriya, Uy-Evanado, Audrey, Norby, Faye, Metcalf, Ginger A., Menon, Vipin K., Yu, Bing, Boerwinkle, Eric, Chugh, Sumeet S., Akdemir, Zeynep, Kransdorf, Evan P.

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Sa1914 The Genomic Landscape of Human Colon Adenomas Reveals Early Driver Mutations and a TGF-β-CEA Regulated Profile von Menon, Vipin K, Raju, Gottumukkala S, Chen, Jian, Su, Xiaoping, Majumdar, Avijit, Shin, Ji-Hyun, Li, Shulin, Shetty, Kirti, Wu, Xifeng, Weston, Brian R, Miller, Ethan, Stroehlein, John R, Davila, Marta L, Shafi, Mehnaz A, Rashid, Asif, Kallakury, Bhaskar V, Thirumurthi, Selvi, McMurray, John S, Lin, Sue-Hwa, Jogunoori, Wilma, Mishra, Lopa

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Sa1851 Prognostic Significance of TGF-β Signaling in Human Hepatocellular Carcinoma von Chen, Jian, Chen, Jiun-Sheng, Zhang, Jianping, Gi, YoungJin, Phan, Liem M, Muñoz, Nina M, Katz, Lior H, Shin, Ji-Hyun, Jeong, Yun Seong, Menon, Vipin K, Jogunoori, Wilma, Mishra, Bibhuti, Javle, Milind, Su, Xiaoping, Farci, Patrizia, Shetty, Kirti, Wu, Xifeng, Hung, Mien-Chie, Herlong, Franklin, Davila, Marta L, Stroehlein, John R, Shaw, Kenna R, Wang, Xuemei, Morris, Jeffrey S, Akbani, Rehan, Mishra, Lopa

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Methods developed during the first National Center for Biotechnology Information Structural Variation Codeathon at Baylor College of Medicine [version 1; peer review: 1 approved, 1... von Mahmoud, Medhat, Gener, Alejandro Rafael, Khayat, Michael M, English, Adam C, Balaji, Advait, Zhou, Anbo, Hehn, Andreas, Fungtammasan, Arkarachai, Chrisman, Brianna Sierra, Chin, Chen-Shan, Lin, Chiao-Feng, Lo, Chun-Hsuan, Liao, Chunxiao, Carvalho, Claudia M. B, Diesh, Colin, Symer, David E, Kalra, Divya, Albin, Dreycey, Aliyev, Elbay, Dawson, Eric T, Venner, Eric, Foertter, Fernanda, Bae, Gigon, Du, Haowei, Daw, Joyjit, Wang, Junzhou, Akagi, Keiko, Phan, Lon, Jochum, Michael, Edrisi, Mohammadamin, Shah, Nirav N, Wang, Qi, Fullem, Robert, Zheng, Rong, Kalla, Sara E, Mitra, Shakuntala, Treangen, Todd J, Mahaganapathy, Vaidhyanathan, Malladi, Venkat Sai, Menon, Vipin K, Fu, Yilei, Yin, Yongze, Feng, Yuanqing, Hefferon, Tim, Sedlazeck, Fritz J, Busby, Ben

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Rare Variants in Genes Encoding Subunits of the Epithelial Na+ Channel Are Associated With Blood Pressure and Kidney Function von Blobner, Brandon M., Kirabo, Annet, Kashlan, Ossama B., Sheng, Shaohu, Arnett, Donna K., Becker, Lewis C., Boerwinkle, Eric, Carlson, Jenna C., Gao, Yan, Gibbs, Richard A., He, Jiang, Irvin, Marguerite R., Kardia, Sharon L.R., Kelly, Tanika N., Kooperberg, Charles, McGarvey, Stephen T., Menon, Vipin K., Montasser, May E., Naseri, Take, Redline, Susan, Reiner, Alexander P., Reupena, Muagututi‘a S., Smith, Jennifer A., Sun, Xiao, Vaidya, Dhananjay, Viaud-Martinez, Karine A., Weeks, Daniel E., Yanek, Lisa R., Zhu, Xiaofeng, Minster, Ryan L., Kleyman, Thomas R.

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Identification of allele-specific KIV-2 repeats and impact on Lp von Behera, Sairam, Belyeu, Jonathan R, Chen, Xiao, Paulin, Luis F, Nguyen, Ngoc Quynh H, Newman, Emma, Mahmoud, Medhat, Menon, Vipin K, Qi, Qibin, Joshi, Parag, Marcovina, Santica, Rossi, Massimiliano, Roller, Eric, Han, James, Onuchic, Vitor, Avery, Christy L, Ballantyne, Christie M, Rodriguez, Carlos J, Kaplan, Robert C, Muzny, Donna M, Metcalf, Ginger A, Gibbs, Richard A, Yu, Bing, Boerwinkle, Eric, Eberle, Michael A, Sedlazeck, Fritz J

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Abstract 67: Genomic and mutational profiling of human colon adenomas reveals early driver mutations and a TGF-β-CEA regulated profile von Menon, Vipin K., Gottumukkala, Raju S., Chen, Jian, Su, Xiaoping, Mistry, Nipun, Majumdar, Avijit, Shin, Ji-Hyun, Li, Shulin, Shetty, Kirti, Wu, Xifeng, Weston, Brian, Miller, Ethan, Stroehlein, John R., Davila, Marta L., Shafi, Mehnaz A., Rashid, Asif, Kallakury, Bhaskar V., Thirumurthi, Selvi, McMurray, John S., Lin, Sue-Hwa, Jogunoori, Wilma, Mishra, Lopa

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Additional file 4 of Truvari: refined structural variant comparison preserves allelic diversity von English, Adam C., Menon, Vipin K., Gibbs, Richard A., Metcalf, Ginger A., Sedlazeck, Fritz J.

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Additional file 6 of Truvari: refined structural variant comparison preserves allelic diversity von English, Adam C., Menon, Vipin K., Gibbs, Richard A., Metcalf, Ginger A., Sedlazeck, Fritz J.

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Additional file 8 of Truvari: refined structural variant comparison preserves allelic diversity von English, Adam C., Menon, Vipin K., Gibbs, Richard A., Metcalf, Ginger A., Sedlazeck, Fritz J.

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Additional file 10 of Truvari: refined structural variant comparison preserves allelic diversity von English, Adam C., Menon, Vipin K., Gibbs, Richard A., Metcalf, Ginger A., Sedlazeck, Fritz J.

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Additional file 1 of Truvari: refined structural variant comparison preserves allelic diversity von English, Adam C., Menon, Vipin K., Gibbs, Richard A., Metcalf, Ginger A., Sedlazeck, Fritz J.

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