Ghost lineages can invalidate or even reverse findings regarding gene flow von Tricou, Théo, Tannier, Eric, de Vienne, Damien M

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Lifemap: Exploring the Entire Tree of Life von de Vienne, Damien M

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Ghost Lineages Highly Influence the Interpretation of Introgression Tests von Tricou, Théo, Tannier, Eric, de Vienne, Damien M

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tidy tree: A New Layout for Phylogenetic Trees von Penel, Simon, de Vienne, Damien M

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Fungal evolutionary genomics provides insight into the mechanisms of adaptive divergence in eukaryotes von Gladieux, Pierre, Ropars, Jeanne, Badouin, Hélène, Branca, Antoine, Aguileta, Gabriela, de Vienne, Damien M., Rodríguez de la Vega, Ricardo C., Branco, Sara, Giraud, Tatiana

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Response to "On the impact of incomplete taxon sampling on the relative timing of gene transfer events" von Tricou, Théo, Tannier, Eric, de Vienne, Damien M

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Endoparasitoid lifestyle promotes endogenization and domestication of dsDNA viruses von Guinet, Benjamin, Lepetit, David, Charlat, Sylvain, Buhl, Peter N, Notton, David G, Cruaud, Astrid, Rasplus, Jean-Yves, Stigenberg, Julia, de Vienne, Damien M, Boussau, Bastien, Varaldi, Julien

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Co‐occurrence among three divergent plant‐castrating fungi in the same Silene host species von Abbate, Jessica L., Gladieux, Pierre, Hood, Michael E., Vienne, Damien M., Antonovics, Janis, Snirc, Alodie, Giraud, Tatiana

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Global survey of mobile DNA horizontal transfer in arthropods reveals Lepidoptera as a prime hotspot von Reiss, Daphné, Mialdea, Gladys, Miele, Vincent, de Vienne, Damien M, Peccoud, Jean, Gilbert, Clément, Duret, Laurent, Charlat, Sylvain

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Speciation in fungi von Giraud, Tatiana, Refrégier, Guislaine, Le Gac, Mickaël, de Vienne, Damien M., Hood, Michael E.

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Lineage Selection and the Maintenance of Sex von de Vienne, Damien M, Giraud, Tatiana, Gouyon, Pierre-Henri

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Multiple convergent supergene evolution events in mating-type chromosomes von Branco, Sara, Carpentier, Fantin, Rodríguez de la Vega, Ricardo C., Badouin, Hélène, Snirc, Alodie, Le Prieur, Stéphanie, Coelho, Marco A., de Vienne, Damien M., Hartmann, Fanny E., Begerow, Dominik, Hood, Michael E., Giraud, Tatiana

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High variability of mitochondrial gene order among fungi von Aguileta, Gabriela, de Vienne, Damien M, Ross, Oliver N, Hood, Michael E, Giraud, Tatiana, Petit, Elsa, Gabaldón, Toni

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Degeneration of the nonrecombining regions in the mating-type chromosomes of the anther-smut fungi von Fontanillas, Eric, Hood, Michael E, Badouin, Hélène, Petit, Elsa, Barbe, Valérie, Gouzy, Jérôme, de Vienne, Damien M, Aguileta, Gabriela, Poulain, Julie, Wincker, Patrick, Chen, Zehua, Toh, Su San, Cuomo, Christina A, Perlin, Michael H, Gladieux, Pierre, Giraud, Tatiana

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Pitfalls in supermatrix phylogenomics von Philippe, Hervé, Vienne, Damien M. de, Ranwez, Vincent, Roure, Béatrice, Baurain, Denis, Delsuc, Frédéric

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Phylo-MCOA: a fast and efficient method to detect outlier genes and species in phylogenomics using multiple co-inertia analysis von de Vienne, Damien M, Ollier, Sébastien, Aguileta, Gabriela

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A congruence index for testing topological similarity between trees von de Vienne, Damien M., Giraud, Tatiana, Martin, Olivier C.

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Tanglegrams Are Misleading for Visual Evaluation of Tree Congruence von de Vienne, Damien M

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Coexistence of two sympatric cryptic bat species in French Guiana: insights from genetic, acoustic and ecological data von Filippi-Codaccioni, Ondine, Beugin, Marie-Pauline, de Vienne, Damien M, Portanier, Elodie, Fouchet, David, Kaerle, Cecile, Muselet, Lina, Queney, Guillaume, Petit, Eric J, Regis, Corinne, Pons, Jean-Baptiste, Pontier, Dominique

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PhylteR: Efficient Identification of Outlier Sequences in Phylogenomic Datasets von Comte, Aurore, Tricou, Théo, Tannier, Eric, Joseph, Julien, Siberchicot, Aurélie, Penel, Simon, Allio, Rémi, Delsuc, Frédéric, Dray, Stéphane, de Vienne, Damien M

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