The bacteriocin from the prophylactic candidate Streptococcus suis 90-1330 is widely distributed across S. suis isolates and appears encoded in an integrative and conjugative eleme... von Sun, Yukun, Veseli, Iva A, Vaillancourt, Katy, Frenette, Michel, Grenier, Daniel, Pombert, Jean-François

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The Diversity and Functional Capacity of Microbes Associated with Coastal Macrophytes von Miranda, Khashiff, Weigel, Brooke L, Fogarty, Emily C, Veseli, Iva A, Giblin, Anne E, Eren, A Murat, Pfister, Catherine A

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Complete Genome Sequence of Staphylococcus lutrae ATCC 700373, a Potential Pathogen Isolated from Deceased Otters von Veseli, Iva A, Tang, Chenling, Pombert, Jean-François

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Complete Genome Sequence of Vitreoscilla sp. Strain C1, Source of the First Bacterial Hemoglobin von Veseli, Iva A, Mascarenhas Dos Santos, Anne Caroline, Juárez, Oscar, Stark, Benjamin C, Pombert, Jean-François

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Palleja et al. 2018 Metagenome Assemblies for Veseli et al. 2023 von Veseli, Iva A.

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Gut Metagenome Assemblies for Veseli et al. 2023 von Veseli, Iva A., Eren, A. Murat

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Heterotrophic bacterial diazotrophs are more abundant than their cyanobacterial counterparts in metagenomes covering most of the sunlit ocean von Delmont, Tom O., Pierella Karlusich, Juan José, Veseli, Iva, Fuessel, Jessika, Eren, A. Murat, Foster, Rachel A., Bowler, Chris, Wincker, Patrick, Pelletier, Eric

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Microbial associates of an endemic Mediterranean seagrass enhance the access of the host and the surrounding seawater to inorganic nitrogen under ocean acidification von Pfister, Catherine A., Cardini, Ulisse, Mirasole, Alice, Montilla, Luis M., Veseli, Iva, Gattuso, Jean-Pierre, Teixido, Nuria

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Metabolic independence drives gut microbial colonization and resilience in health and disease von Watson, Andrea R, Füssel, Jessika, Veseli, Iva, DeLongchamp, Johanna Zaal, Silva, Marisela, Trigodet, Florian, Lolans, Karen, Shaiber, Alon, Fogarty, Emily, Runde, Joseph M, Quince, Christopher, Yu, Michael K, Söylev, Arda, Morrison, Hilary G, Lee, Sonny T M, Kao, Dina, Rubin, David T, Jabri, Bana, Louie, Thomas, Eren, A Murat

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Pharmaceuticals and endocrine disrupting compounds modulate adverse effects of climate change on resource quality in freshwater food webs von Kokotović, Iva, Veseli, Marina, Ložek, Filip, Karačić, Zrinka, Rožman, Marko, Previšić, Ana

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Correction to: Heterotrophic bacterial diazotrophs are more abundant than their cyanobacterial counterparts in metagenomes covering most of the sunlit ocean von Delmont, Tom O., Pierella Karlusich, Juan José, Veseli, Iva, Fuessel, Jessika, Eren, A. Murat, Foster, Rachel A., Bowler, Chris, Wincker, Patrick, Pelletier, Eric

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Microbial associates of an endemic Mediterranean seagrass enhance the access of the host and the surrounding seawater to inorganic nitrogen under ocean acidification von Pfister, Catherine A, Cardini, Ulisse, Mirasole, Alice, Montilla, Luis M, Veseli, Iva, Gattuso, Jean-Pierre, Teixido, Nuria

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Community-led, integrated, reproducible multi-omics with anvi’o von Eren, A. Murat, Kiefl, Evan, Shaiber, Alon, Veseli, Iva, Miller, Samuel E., Schechter, Matthew S., Fink, Isaac, Pan, Jessica N., Yousef, Mahmoud, Fogarty, Emily C., Trigodet, Florian, Watson, Andrea R., Esen, Özcan C., Moore, Ryan M., Clayssen, Quentin, Lee, Michael D., Kivenson, Veronika, Graham, Elaina D., Merrill, Bryan D., Karkman, Antti, Blankenberg, Daniel, Eppley, John M., Sjödin, Andreas, Scott, Jarrod J., Vázquez-Campos, Xabier, McKay, Luke J., McDaniel, Elizabeth A., Stevens, Sarah L. R., Anderson, Rika E., Fuessel, Jessika, Fernandez-Guerra, Antonio, Maignien, Lois, Delmont, Tom O., Willis, Amy D.

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Digital Microbe: a genome-informed data integration framework for team science on emerging model organisms von Veseli, Iva, DeMers, Michelle A., Cooper, Zachary S., Schechter, Matthew S., Miller, Samuel, Weber, Laura, Smith, Christa B., Rodriguez, Lidimarie T., Schroer, William F., McIlvin, Matthew R., Lopez, Paloma Z., Saito, Makoto, Dyhrman, Sonya, Eren, A. Murat, Moran, Mary Ann, Braakman, Rogier

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A cryptic plasmid is among the most numerous genetic elements in the human gut von Fogarty, Emily C., Schechter, Matthew S., Lolans, Karen, Sheahan, Madeline L., Veseli, Iva, Moore, Ryan M., Kiefl, Evan, Moody, Thomas, Rice, Phoebe A., Yu, Michael K., Mimee, Mark, Chang, Eugene B., Ruscheweyh, Hans-Joachim, Sunagawa, Shinichi, Mclellan, Sandra L., Willis, Amy D., Comstock, Laurie E., Eren, A. Murat

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Transient Suppression of Bacterial Populations Associated with Gut Health is Critical in Success of Exclusive Enteral Nutrition for Children with Crohn’s Disease von Runde, Joseph, Veseli, Iva, Fogarty, Emily C, Watson, Andrea R, Clayssen, Quentin, Yosef, Mahmoud, Shaiber, Alon, Verma, Ritu, Quince, Christopher, Gerasimidis, Konstantinos, Rubin, David T, Eren, A Murat

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Construction of an Openspim Light-Sheet Microscope for the Study of Neural Crest Migration in Danio Rerio von Rocha, Manuel, Reyer, Matt, Alvarado, Walter, Glauninger, Hendrik, Hoinville, Megan, Kroll, Kourtney, MacDonald, Margo, Rouviere, Eric, Schnitkey, Diane, Veseli, Iva, Wasserman, Steven, Prince, Victoria, Hammond, Adam

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Datapack for BASH Tutorial von Veseli, Iva

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Table of KEGG module reversibility for 33 IBD-enriched modules von Veseli, Iva

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Reproducible Workflow Datapack for Veseli et al. 2023 von Veseli, Iva

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