Multi-parent populations in crops: a toolbox integrating genomics and genetic mapping with breeding von Scott, Michael F, Ladejobi, Olufunmilayo, Amer, Samer, Bentley, Alison R, Biernaskie, Jay, Boden, Scott A, Clark, Matt, Dell'Acqua, Matteo, Dixon, Laura E, Filippi, Carla V, Fradgley, Nick, Gardner, Keith A, Mackay, Ian J, O'Sullivan, Donal, Percival-Alwyn, Lawrence, Roorkiwal, Manish, Singh, Rakesh Kumar, Thudi, Mahendar, Varshney, Rajeev Kumar, Venturini, Luca, Whan, Alex, Cockram, James, Mott, Richard

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An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations von Clavijo, Bernardo J, Venturini, Luca, Schudoma, Christian, Accinelli, Gonzalo Garcia, Kaithakottil, Gemy, Wright, Jonathan, Borrill, Philippa, Kettleborough, George, Heavens, Darren, Chapman, Helen, Lipscombe, James, Barker, Tom, Lu, Fu-Hao, McKenzie, Neil, Raats, Dina, Ramirez-Gonzalez, Ricardo H, Coince, Aurore, Peel, Ned, Percival-Alwyn, Lawrence, Duncan, Owen, Trösch, Josua, Yu, Guotai, Bolser, Dan M, Namaati, Guy, Kerhornou, Arnaud, Spannagl, Manuel, Gundlach, Heidrun, Haberer, Georg, Davey, Robert P, Fosker, Christine, Palma, Federica Di, Phillips, Andrew L, Millar, A Harvey, Kersey, Paul J, Uauy, Cristobal, Krasileva, Ksenia V, Swarbreck, David, Bevan, Michael W, Clark, Matthew D

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A chromosome-anchored eggplant genome sequence reveals key events in Solanaceae evolution von Barchi, Lorenzo, Pietrella, Marco, Venturini, Luca, Minio, Andrea, Toppino, Laura, Acquadro, Alberto, Andolfo, Giuseppe, Aprea, Giuseppe, Avanzato, Carla, Bassolino, Laura, Comino, Cinzia, Molin, Alessandra Dal, Ferrarini, Alberto, Maor, Louise Chappell, Portis, Ezio, Reyes-Chin-Wo, Sebastian, Rinaldi, Riccardo, Sala, Tea, Scaglione, Davide, Sonawane, Prashant, Tononi, Paola, Almekias-Siegl, Efrat, Zago, Elisa, Ercolano, Maria Raffaella, Aharoni, Asaph, Delledonne, Massimo, Giuliano, Giovanni, Lanteri, Sergio, Rotino, Giuseppe Leonardo

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Genome-wide analysis of the expansin gene superfamily reveals grapevine-specific structural and functional characteristics von Dal Santo, Silvia, Vannozzi, Alessandro, Tornielli, Giovanni Battista, Fasoli, Marianna, Venturini, Luca, Pezzotti, Mario, Zenoni, Sara

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Genetic analysis of wheat sensitivity to the ToxB fungal effector from Pyrenophora tritici-repentis, the causal agent of tan spot von Corsi, Beatrice, Percival-Alwyn, Lawrence, Downie, Rowena C., Venturini, Luca, Iagallo, Elyce M., Campos Mantello, Camila, McCormick-Barnes, Charlie, See, Pao Theen, Oliver, Richard P., Moffat, Caroline S., Cockram, James

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Metabolite and transcript profiling of berry skin during fruit development elucidates differential regulation between Cabernet Sauvignon and Shiraz cultivars at branching points in... von Degu, Asfaw, Hochberg, Uri, Sikron, Noga, Venturini, Luca, Buson, Genny, Ghan, Ryan, Plaschkes, Inbar, Batushansky, Albert, Chalifa-Caspi, Vered, Mattivi, Fulvio, Delledonne, Massimo, Pezzotti, Mario, Rachmilevitch, Shimon, Cramer, Grant R, Fait, Aaron

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Decreased Nucleotide and Expression Diversity and Modified Coexpression Patterns Characterize Domestication in the Common Bean von Bellucci, Elisa, Bitocchi, Elena, Ferrarini, Alberto, Benazzo, Andrea, Biagetti, Eleonora, Klie, Sebastian, Minio, Andrea, Rau, Domenico, Rodriguez, Monica, Panziera, Alex, Venturini, Luca, Attene, Giovanna, Albertini, Emidio, Jackson, Scott A., Nanni, Laura, Fernie, Alisdair R., Nikoloski, Zoran, Bertorelle, Giorgio, Delledonne, Massimo, Papa, Roberto

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De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity von Venturini, Luca, Ferrarini, Alberto, Zenoni, Sara, Tornielli, Giovanni Battista, Fasoli, Marianna, Dal Santo, Silvia, Minio, Andrea, Buson, Genny, Tononi, Paola, Zago, Elisa Debora, Zamperin, Gianpiero, Bellin, Diana, Pezzotti, Mario, Delledonne, Massimo

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Scaling associative classification for very large datasets von Venturini, Luca, Baralis, Elena, Garza, Paolo

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Symbiotic plant-fungi interactions stripped down to the root von Venturini, Luca, Delledonne, Massimo

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Efficient and accurate detection of splice junctions from RNA-seq with Portcullis von Mapleson, Daniel, Venturini, Luca, Kaithakottil, Gemy, Swarbreck, David

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The transcriptional landscape of polyploid wheat von Ramírez-González, R H, Borrill, P, Lang, D, Harrington, S A, Brinton, J, Venturini, L, Davey, M, Jacobs, J, van Ex, F, Pasha, A, Khedikar, Y, Robinson, S J, Cory, A T, Florio, T, Concia, L, Juery, C, Schoonbeek, H, Steuernagel, B, Xiang, D, Ridout, C J, Chalhoub, B, Mayer, K F X, Benhamed, M, Latrasse, D, Bendahmane, A, Wulff, B B H, Appels, R, Tiwari, V, Datla, R, Choulet, F, Pozniak, C J, Provart, N J, Sharpe, A G, Paux, E, Spannagl, M, Bräutigam, A, Uauy, C

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Shifting the limits in wheat research and breeding using a fully annotated reference genome von Appels, Rudi, Eversole, Kellye, Stein, Nils, Feuillet, Catherine, Keller, Beat, Rogers, Jane, Pozniak, Curtis J., Choulet, Frédéric, Distelfeld, Assaf, Poland, Jesse, Ronen, Gil, Sharpe, Andrew G., Barad, Omer, Baruch, Kobi, Keeble-Gagnère, Gabriel, Mascher, Martin, Ben-Zvi, Gil, Josselin, Ambre-Aurore, Himmelbach, Axel, Balfourier, François, Gutierrez-Gonzalez, Juan, Hayden, Matthew, Koh, ChuShin, Muehlbauer, Gary, Pasam, Raj K., Paux, Etienne, Rigault, Philippe, Tibbits, Josquin, Tiwari, Vijay, Spannagl, Manuel, Lang, Daniel, Gundlach, Heidrun, Haberer, Georg, Mayer, Klaus F. X., Ormanbekova, Danara, Prade, Verena, Šimková, Hana, Wicker, Thomas, Swarbreck, David, Rimbert, Hélène, Felder, Marius, Guilhot, Nicolas, Kaithakottil, Gemy, Keilwagen, Jens, Leroy, Philippe, Lux, Thomas, Twardziok, Sven, Venturini, Luca, Juhász, Angéla, Abrouk, Michael, Fischer, Iris, Uauy, Cristobal, Borrill, Philippa, Ramirez-Gonzalez, Ricardo H., Arnaud, Dominique, Chalabi, Smahane, Chalhoub, Boulos, Cory, Aron, Datla, Raju, Davey, Mark W., Jacobs, John, Robinson, Stephen J., Steuernagel, Burkhard, van Ex, Fred, Wulff, Brande B. H., Benhamed, Moussa, Bendahmane, Abdelhafid, Concia, Lorenzo, Latrasse, David, Bartoš, Jan, Bellec, Arnaud, Berges, Hélène, Doležel, Jaroslav, Frenkel, Zeev, Gill, Bikram, Korol, Abraham, Letellier, Thomas, Olsen, Odd-Arne, Singh, Kuldeep, Valárik, Miroslav, van der Vossen, Edwin, Vautrin, Sonia, Weining, Song, Fahima, Tzion, Glikson, Vladimir, Raats, Dina, Číhalíková, Jarmila, Toegelová, Helena, Vrána, Jan, Sourdille, Pierre, Darrier, Benoit, Barabaschi, Delfina, Cattivelli, Luigi, Hernandez, Pilar, Galvez, Sergio, Budak, Hikmet, Jones, Jonathan D. G., Witek, Kamil, Yu, Guotai, Small, Ian

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Multiple wheat genomes reveal global variation in modern breeding von Walkowiak, Sean, Gao, Liangliang, Monat, Cecile, Haberer, Georg, Kassa, Mulualem T., Brinton, Jemima, Ramirez-Gonzalez, Ricardo H., Kolodziej, Markus C., Delorean, Emily, Thambugala, Dinushika, Klymiuk, Valentyna, Byrns, Brook, Gundlach, Heidrun, Bandi, Venkat, Siri, Jorge Nunez, Nilsen, Kirby, Aquino, Catharine, Himmelbach, Axel, Copetti, Dario, Ban, Tomohiro, Venturini, Luca, Bevan, Michael, Clavijo, Bernardo, Koo, Dal-Hoe, Ens, Jennifer, Wiebe, Krystalee, N’Diaye, Amidou, Fritz, Allen K., Gutwin, Carl, Fiebig, Anne, Fosker, Christine, Fu, Bin Xiao, Accinelli, Gonzalo Garcia, Gardner, Keith A., Fradgley, Nick, Gutierrez-Gonzalez, Juan, Halstead-Nussloch, Gwyneth, Hatakeyama, Masaomi, Koh, Chu Shin, Deek, Jasline, Costamagna, Alejandro C., Fobert, Pierre, Heavens, Darren, Kanamori, Hiroyuki, Kawaura, Kanako, Kobayashi, Fuminori, Krasileva, Ksenia, Kuo, Tony, McKenzie, Neil, Murata, Kazuki, Nabeka, Yusuke, Paape, Timothy, Padmarasu, Sudharsan, Percival-Alwyn, Lawrence, Kagale, Sateesh, Scholz, Uwe, Sese, Jun, Juliana, Philomin, Singh, Ravi, Shimizu-Inatsugi, Rie, Swarbreck, David, Cockram, James, Budak, Hikmet, Tameshige, Toshiaki, Tanaka, Tsuyoshi, Tsuji, Hiroyuki, Wright, Jonathan, Wu, Jianzhong, Steuernagel, Burkhard, Small, Ian, Cloutier, Sylvie, Keeble-Gagnère, Gabriel, Muehlbauer, Gary, Tibbets, Josquin, Nasuda, Shuhei, Melonek, Joanna, Hucl, Pierre J., Sharpe, Andrew G., Clark, Matthew, Legg, Erik, Bharti, Arvind, Langridge, Peter, Hall, Anthony, Uauy, Cristobal, Mascher, Martin, Krattinger, Simon G., Handa, Hirokazu, Shimizu, Kentaro K., Distelfeld, Assaf, Chalmers, Ken, Keller, Beat, Mayer, Klaus F. X., Poland, Jesse, Stein, Nils, McCartney, Curt A., Spannagl, Manuel, Wicker, Thomas, Pozniak, Curtis J.

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The Grapevine Expression Atlas Reveals a Deep Transcriptome Shift Driving the Entire Plant into a Maturation Program von Fasoli, Marianna, Dal Santo, Silvia, Zenoni, Sara, Tornielli, Giovanni Battista, Farina, Lorenzo, Zamboni, Anita, Porceddu, Andrea, Venturini, Luca, Bicego, Manuele, Murino, Vittorio, Ferrarini, Alberto, Delledonne, Massimo, Pezzotti, Mario

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Leveraging multiple transcriptome assembly methods for improved gene structure annotation von Venturini, Luca, Caim, Shabhonam, Kaithakottil, Gemy George, Mapleson, Daniel Lee, Swarbreck, David

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Expression Dynamics of the Medicago truncatula Transcriptome during the Symbiotic Interaction with Sinorhizobium meliloti: Which Role for Nitric Oxide? von Boscari, Alexandre, del Giudice, Jennifer, Ferrarini, Alberto, Venturini, Luca, Zaffini, Anne-Lise, Delledonne, Massimo, Puppo, Alain

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The High Polyphenol Content of Grapevine Cultivar Tannat Berries Is Conferred Primarily by Genes That Are Not Shared with the Reference Genome von Da Silva, Cecilia, Zamperin, Gianpiero, Ferrarini, Alberto, Minio, Andrea, Molin, Alessandra Dal, Venturini, Luca, Buson, Genny, Tononi, Paola, Avanzato, Carla, Zago, Elisa, Boido, Eduardo, Dellacassa, Eduardo, Gaggero, Carina, Pezzotti, Mario, Carrau, Francisco, Delledonne, Massimo

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Frequent Itemsets Mining for Big Data: A Comparative Analysis von Apiletti, Daniele, Baralis, Elena, Cerquitelli, Tania, Garza, Paolo, Pulvirenti, Fabio, Venturini, Luca

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Mapping and Analysis of Illumina Reads for Transcriptome of Medicago Truncatula During the Early Organogenesis of the Nodule von Boscari, Alexandre, Ferrarini, Alberto, Giudice, Jennifer, Venturini, Luca, Delledone, Massimo, Puppo, Alain

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