Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra von Yates, John R, Venable, John D, Dong, Meng-Qiu, Wohlschlegel, James, Dillin, Andrew

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Blockade of Tim-3 binding to phosphatidylserine and CEACAM1 is a shared feature of anti-Tim-3 antibodies that have functional efficacy von Sabatos-Peyton, Catherine A., Nevin, James, Brock, Ansgar, Venable, John D., Tan, Dewar J., Kassam, Nasim, Xu, Fangmin, Taraszka, John, Wesemann, Luke, Pertel, Thomas, Acharya, Nandini, Klapholz, Max, Etminan, Yassaman, Jiang, Xiaomo, Huang, Yu-Hwa, Blumberg, Richard S., Kuchroo, Vijay K., Anderson, Ana C.

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Automated Ultra-High-Pressure Multidimensional Protein Identification Technology (UHP-MudPIT) for Improved Peptide Identification of Proteomic Samples von Motoyama, Akira, Venable, John D, Ruse, Cristian I, Yates, John R

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Quantification of the synaptosomal proteome of the rat cerebellum during post-natal development von McClatchy, Daniel B, Liao, Lujian, Park, Sung Kyu, Venable, John D, Yates, John R

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Identification of the anti-inflammatory protein tristetraprolin as a hyperphosphorylated protein by mass spectrometry and site-directed mutagenesis von Cao, Heping, Deterding, Leesa J, Venable, John D, Kennington, Elizabeth A, Yates, 3rd, John R, Tomer, Kenneth B, Blackshear, Perry J

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Proteasome inhibition for treatment of leishmaniasis, Chagas disease and sleeping sickness von Khare, Shilpi, Nagle, Advait S., Biggart, Agnes, Lai, Yin H., Liang, Fang, Davis, Lauren C., Barnes, S. Whitney, Mathison, Casey J. N., Myburgh, Elmarie, Gao, Mu-Yun, Gillespie, J. Robert, Liu, Xianzhong, Tan, Jocelyn L., Stinson, Monique, Rivera, Ianne C., Ballard, Jaime, Yeh, Vince, Groessl, Todd, Federe, Glenn, Koh, Hazel X. Y., Venable, John D., Bursulaya, Badry, Shapiro, Michael, Mishra, Pranab K., Spraggon, Glen, Brock, Ansgar, Mottram, Jeremy C., Buckner, Frederick S., Rao, Srinivasa P. S., Wen, Ben G., Walker, John R., Tuntland, Tove, Molteni, Valentina, Glynne, Richard J., Supek, Frantisek

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A quantitative analysis software tool for mass spectrometry-based proteomics von Yates, John R, Park, Sung Kyu, Venable, John D, Xu, Tao

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Subzero Temperature Chromatography for Reduced Back-Exchange and Improved Dynamic Range in Amide Hydrogen/Deuterium Exchange Mass Spectrometry von Venable, John D, Okach, Linda, Agarwalla, Sanjay, Brock, Ansgar

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Quantitative Mass Spectrometry Identifies Insulin Signaling Targets in C. elegans von Dong, Meng-Qiu, Venable, John D, Au, Nora, Xu, Tao, Park, Sung Kyu, Cociorva, Daniel, Johnson, Jeffrey R, Dillin, Andrew, Yates, John R. III

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Feature Based Retention Time Alignment for Improved HDX MS Analysis von Venable, John D., Scuba, William, Brock, Ansgar

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Estimation of Hydrogen-Exchange Protection Factors from MD Simulation Based on Amide Hydrogen Bonding Analysis von Park, In-Hee, Venable, John D, Steckler, Caitlin, Cellitti, Susan E, Lesley, Scott A, Spraggon, Glen, Brock, Ansgar

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Isotope-Coded Labeling for Accelerated Protein Interaction Profiling Using MS von Venable, John D, Steckler, Caitlin, Ou, Weijia, Grünewald, Jan, Agarwalla, Sanjay, Brock, Ansgar

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Characterization of Global Yeast Quantitative Proteome Data Generated from the Wild-Type and Glucose Repression Saccharomyces cerevisiae Strains: The Comparison of Two Quantitative... von Usaite, Renata, Wohlschlegel, James, Venable, John D, Park, Sung K, Nielsen, Jens, Olsson, Lisbeth, Yates III, John R

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Quantitative Phosphoproteomic Analysis of the Tumor Necrosis Factor Pathway von Cantin, Greg T, Venable, John D, Cociorva, Daniel, Yates, John R

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Relative Quantification of Stable Isotope Labeled Peptides Using a Linear Ion Trap-Orbitrap Hybrid Mass Spectrometer von Venable, John D, Wohlschlegel, James, McClatchy, Daniel B, Park, Sung Kyu, Yates, John R

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Impact of Ion Trap Tandem Mass Spectra Variability on the Identification of Peptides von Venable, John D., Yates, John R.

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Comparison of Different Signal Thresholds on Data Dependent Sampling in Orbitrap and LTQ Mass Spectrometry for the Identification of Peptides and Proteins in Complex Mixtures von Wong, Catherine C.L., Cociorva, Daniel, Venable, John D., Xu, Tao, Yates, John R.

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Cross-Correlation Algorithm for Calculation of Peptide Molecular Weight from Tandem Mass Spectra von Venable, John D, Xu, Tao, Cociorva, Daniel, Yates, John R

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Optimizing the Multielement Analysis Capabilities of an ICP Quadrupole Mass Spectrometer Using Electrothermal Vaporization Sample Introduction von Venable, John D, Langer, Delony, Holcombe, James A

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15N Metabolic Labeling of Mammalian Tissue with Slow Protein Turnover von McClatchy, Daniel B, Dong, Meng-Qiu, Wu, Christine C, Venable, John D, Yates, John R

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