The context signals of mitochondrial miRNAs (mitomiRs) of mammals von Vishnevsky, O V, Vorozheykin, P S, Titov, I I

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Promoters of genes encoding β-amylase, albumin and globulin in food plants have weaker affinity for TATA-binding protein as compared to non-food plants: in silico analysis von Vishnevsky, O V, Chadaeva, I V, Sharypova, E B, Khandaev, B M, Zolotareva, K A, Kazachek, A V, Ponomarenko, P M, Podkolodny, N L, Rasskazov, D A, Bogomolov, A G, Podkolodnaya, O A, Savinkova, L K, Zemlyanskaya, E V, Ponomarenko, M P

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Russian Science Foundation grant No. 20-14-00140 supported this study. The authors are thankful to the multi-access Center “Bioinformatics” for the use of computational resources a... von Vishnevsky, O. V., Chadaeva, I. V., Sharypova, E. B., Khandaev, B. M., Zolotareva, K. A., Kazachek, A. V., Ponomarenko, P. M., Podkolodny, N. L., Rasskazov, D. A., Zemlyanskaya, E. V., Bogomolov, A. G., Podkolodnaya, O. A., Savinkova, L. K., Ponomarenko, M. P.

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The use of graphics accelerators to detect functional signals in the regulatory regions of prokaryotic genes von O. V. Vishnevsky, A. V. Bocharnikov, A. A. Romanenko

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Investigating extended regulatory regions of genomic DNA sequences von Babenko, V N, Kosarev, P S, Vishnevsky, O V, Levitsky, V G, Basin, V V, Frolov, A S

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ARGO: a web system for the detection of degenerate motifs and large-scale recognition of eukaryotic promoters von Vishnevsky, Oleg V., Kolchanov, Nikolay A.

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Analysis of degenerate motifs in the promoters of miRNA genes expressed in different mammalian tissues von Vishnevsky, O. V, Gunbin, K. V, Bocharnikov, A. V, Berezikov, E. V

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Analysis and Recognition of Erythroid-Specific Gene Promoters Basing on Degenerate Oligonucleotide Motifs von Vishnevsky, O V, Vityaev, E E

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An Integrated Computer System for Studying the Regulation of Eukaryotic Gene Expression von Kolchanov, N. A., Podkolodnaya, O. A., Ananko, E. A., Afonnikov, D. A., Vishnevsky, O. V., Vorobiev, D. G., Ignatieva, E. V., Levitskii, V. G., Likhoshvai, V. A., Omelyanchuk, N. A., Podkolodny, N. L., Ratushny, A. V., Suslov, V. V.

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Computer System "Gene Discovery" to Search for Patterns in Eukaryotic Regulatory Nucleotide Sequences von Vityaev, E E, Orlov, Yu L, Vishnevsky, O V, Belenok, A S, Kolchanov, N A

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TRRD and COMPEL databases on transcription linked to TRANSFACAS as tools for analysis and recognition of regulatory sequences von KEL, A. E, KEL, O. V, VISHNEVSKY, O. V, PONOMARENKO, M. P, ISCHENKO, I. V, KARAS, H, KOLCHANOV, N. A, SKLENAR, H, WINGENDER, E

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Computer System mRNA-FAST (mRNA Function, Activity, STructure) von Kochetov, A V, Grigorovich, D A, Titov, I I, Vorob'ev, D G, Sirnik, O A, Vishnevsky, O V, Sarai, A, Kolchanov, N A

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SNP_TATA_COMPARATOR: Web SERVICE FOR COMPARISON OF SNPs WITHIN GENE PROMOTЕRS ASSOCIATED WITH HUMAN DISEASES USING THE EQUILIBRIUM EQUATION OF THE TBP/TATA COMPLEX von D. A. Rasskazov, K. V. Gunbin, P. M. Ponomarenko, O. V. Vishnevsky, M. P. Ponomarenko, D. A. Afonnikov

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COMPUTER ANALYSIS OF DATA ON GENE EXPRESSION IN BRAIN CELLS OBTAINED BY MICROARRAY TESTS AND HIGH-THROUGHPUT SEQUENCING von I. V. Medvedeva, O. V. Vishnevsky, N. S. Safronova, O. S. Kozhevnikova, M. A. Genaev, A. V. Kochetov, D. A. Afonnikov, Y. L. Orlov

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ICGenomics: A PROGRAM COMPLEX FOR ANALYSIS OF SYMBOL SEQUENCES IN GENOMICS von Y. L. Orlov, A. O. Bragin, I. V. Medvedeva, K. V. Gunbin, P. S. Demenkov, O. V. Vishnevsky, V. G. Levitsky, D. Y. Oshchepkov, N. L. Podkolodnyy, D. A. Afonnikov, I. Grosse, N. A. Kolchanov

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New motif discovery approach von O. V. Vishnevsky, An. V. Bocharnikov

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Analysis of the nucleotide context of Arabidopsis thaliana mitochondrial mRNA editing sites von Vishnevsky, O. V., Titov, I. I., Konstantinov, Yu. M.

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Investigating extended regulatory regions of genomic DNA sequences von BABENKO, V. N, KOSAREV, P. S, VISHNEVSKY, O. V, LEVITSKY, V. G, BASIN, V. V, FROLOV, A. S

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TRRD and COMPEL databases on transcription linked to TRANSFACAS as tools for analysis and recognition of regulatory sequences von Kel, A. E., Kel, O. V., Vishnevsky, O. V., Ponomarenko, M. P., Ischenko, I. V., Karas, H., Kolchanov, N. A., Sklenar, H., Wingender, E.

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Methods of Analysis of Information-Measuring System Performance under Fault Conditions von Barabanova, E. A., Vishnevsky, V. M., Vytovtov, K. A., Semenova, O. V.

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