Clinical correlates of circulating cell-free DNA tumor fraction von Bredno, Joerg, Lipson, Jafi, Venn, Oliver, Aravanis, Alexander M, Jamshidi, Arash

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High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants von Razavi, Pedram, Li, Bob T., Brown, David N., Jung, Byoungsok, Hubbell, Earl, Shen, Ronglai, Abida, Wassim, Juluru, Krishna, De Bruijn, Ino, Hou, Chenlu, Venn, Oliver, Lim, Raymond, Anand, Aseem, Maddala, Tara, Gnerre, Sante, Vijaya Satya, Ravi, Liu, Qinwen, Shen, Ling, Eattock, Nicholas, Yue, Jeanne, Blocker, Alexander W., Lee, Mark, Sehnert, Amy, Xu, Hui, Hall, Megan P., Santiago-Zayas, Angie, Novotny, William F., Isbell, James M., Rusch, Valerie W., Plitas, George, Heerdt, Alexandra S., Ladanyi, Marc, Hyman, David M., Jones, David R., Morrow, Monica, Riely, Gregory J., Scher, Howard I., Rudin, Charles M., Robson, Mark E., Diaz, Luis A., Solit, David B., Aravanis, Alexander M., Reis-Filho, Jorge S.

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Stable recombination hotspots in birds von Singhal, Sonal, Leffler, Ellen M., Sannareddy, Keerthi, Turner, Isaac, Venn, Oliver, Hooper, Daniel M., Strand, Alva I., Li, Qiye, Raney, Brian, Balakrishnan, Christopher N., Griffith, Simon C., McVean, Gil, Przeworski, Molly

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Strong male bias drives germline mutation in chimpanzees von Venn, Oliver, Turner, Isaac, Mathieson, Iain, de Groot, Natasja, Bontrop, Ronald, McVean, Gil

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Multiple Instances of Ancient Balancing Selection Shared Between Humans and Chimpanzees von Leffler, Ellen M., Gao, Ziyue, Pfeifer, Susanne, Ségurel, Laure, Auton, Adam, Venn, Oliver, Bowden, Rory, Bontrop, Ronald, Wall, Jeffrey D., Sella, Guy, Donnelly, Peter, McVean, Gilean, Przeworski, Molly

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A Fine-Scale Chimpanzee Genetic Map from Population Sequencing von Auton, Adam, Fledel-Alon, Adi, Pfeifer, Susanne, Venn, Oliver, Ségurel, Laure, Street, Teresa, Leffler, Ellen M., Bowden, Rory, Aneas, Ivy, Broxholme, John, Humburg, Peter, Iqbal, Zamin, Lunter, Gerton, Maller, Julian, Hernandez, Ryan D., Melton, Cord, Venkat, Aarti, Nobrega, Marcelo A., Bontrop, Ronald, Myers, Simon, Donnelly, Peter, Przeworski, Molly, McVean, Gil

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Genome-wide sequencing for early stage lung cancer detection from plasma cell-free DNA (cfDNA): The Circulating Cancer Genome Atlas (CCGA) study von Oxnard, Geoffrey R., Maddala, Tara, Hubbell, Earl, Aravanis, Alex, Zhang, Nan, Venn, Oliver, Valouev, Anton, Shen, Ling, Patel, Shilpen, Jamshidi, Arash, Jagadeesh, Karthik, Gross, Samuel, Filippova, Darya, Beausang, John F., Liu, Minetta C., Richards, Donald A., Plevritis, Sylvia, Williams, Richard Thomas, Hartman, Anne-Renee, Swanton, Charles

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Prevalence of clonal hematopoiesis of indeterminate potential (CHIP) measured by an ultra-sensitive sequencing assay: Exploratory analysis of the Circulating Cancer Genome Atlas (C... von Swanton, Charles, Venn, Oliver, Aravanis, Alex, Hubbell, Earl, Maddala, Tara, Beausang, John F., Filippova, Darya, Gross, Samuel, Jamshidi, Arash, Shen, Ling, Valouev, Anton, Zhang, Nan, Bolton, Kelly L, Yeatman, Timothy Joseph, Seiden, Michael, Oxnard, Geoffrey R., Liu, Minetta C., Williams, Richard Thomas, Hartman, Anne-Renee, Baselga, Jose

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cfDNA Methylation-Based Pan-Hematologic Prognostic Classification von Huang, Yuefan, Shi, Alvin, Shaknovich, Rita, Venn, Oliver, Liu, Qinwen

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Nonhuman genetics. Strong male bias drives germline mutation in chimpanzees von Venn, Oliver, Turner, Isaac, Mathieson, Iain, de Groot, Natasja, Bontrop, Ronald, McVean, Gil

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Circulating Tumor DNA Allele Fraction: A Candidate Biological Signal for Multicancer Early Detection Tests to Assess the Clinical Significance of Cancers von Bredno, Joerg, Venn, Oliver, Chen, Xiaoji, Freese, Peter, Ofman, Joshua J

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Methylation Biology of a Blood-Based MDS Risk Stratification Test von Shi, Alvin, Ali, Abdullah Mahmood, Cann, Gordon, Shaknovich, Rita, Venn, Oliver, Raza, Azra, Liu, Qinwen

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Modeled residual current cancer risk after clinical investigation of a positive multicancer early detection test result von Hudnut, Andrew G., Hubbell, Earl, Venn, Oliver, Church, Timothy R.

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A DNA methylation atlas of normal human cell types von Loyfer, Netanel, Magenheim, Judith, Peretz, Ayelet, Cann, Gordon, Bredno, Joerg, Klochendler, Agnes, Fox-Fisher, Ilana, Shabi-Porat, Sapir, Hecht, Merav, Pelet, Tsuria, Moss, Joshua, Drawshy, Zeina, Amini, Hamed, Moradi, Patriss, Nagaraju, Sudharani, Bauman, Dvora, Shveiky, David, Porat, Shay, Dior, Uri, Rivkin, Gurion, Or, Omer, Hirshoren, Nir, Carmon, Einat, Pikarsky, Alon, Khalaileh, Abed, Zamir, Gideon, Grinbaum, Ronit, Abu Gazala, Machmud, Mizrahi, Ido, Shussman, Noam, Korach, Amit, Wald, Ori, Izhar, Uzi, Erez, Eldad, Yutkin, Vladimir, Samet, Yaacov, Rotnemer Golinkin, Devorah, Spalding, Kirsty L., Druid, Henrik, Arner, Peter, Shapiro, A. M. James, Grompe, Markus, Aravanis, Alex, Venn, Oliver, Jamshidi, Arash, Shemer, Ruth, Dor, Yuval, Glaser, Benjamin, Kaplan, Tommy

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Methylation-based prediction of myelodysplastic syndrome survival outcomes von Shi, Alvin, Ali, Abdullah, Cann, Gordon, Shaknovich, Rita, Venn, Oliver, Raza, Azra, Liu, Qinwen

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Evaluation of cell-free DNA approaches for multi-cancer early detection von Jamshidi, Arash, Liu, Minetta C., Klein, Eric A., Venn, Oliver, Hubbell, Earl, Beausang, John F., Gross, Samuel, Melton, Collin, Fields, Alexander P., Liu, Qinwen, Zhang, Nan, Fung, Eric T., Kurtzman, Kathryn N., Amini, Hamed, Betts, Craig, Civello, Daniel, Freese, Peter, Calef, Robert, Davydov, Konstantin, Fayzullina, Saniya, Hou, Chenlu, Jiang, Roger, Jung, Byoungsok, Tang, Susan, Demas, Vasiliki, Newman, Joshua, Sakarya, Onur, Scott, Eric, Shenoy, Archana, Shojaee, Seyedmehdi, Steffen, Kristan K., Nicula, Virgil, Chien, Tom C., Bagaria, Siddhartha, Hunkapiller, Nathan, Desai, Mohini, Dong, Zhao, Richards, Donald A., Yeatman, Timothy J., Cohn, Allen L., Thiel, David D., Berry, Donald A., Tummala, Mohan K., McIntyre, Kristi, Sekeres, Mikkael A., Bryce, Alan, Aravanis, Alexander M., Seiden, Michael V., Swanton, Charles

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Prognostic Significance of Blood-Based Multi-cancer Detection in Plasma Cell-Free DNA von Chen, Xiaoji, Dong, Zhao, Hubbell, Earl, Kurtzman, Kathryn N, Oxnard, Geoffrey R, Venn, Oliver, Melton, Collin, Clarke, Christina A, Shaknovich, Rita, Ma, Ting, Meixiong, Gerry, Seiden, Michael V, Klein, Eric A, Fung, Eric T, Liu, Minetta C

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Circulating Tumor DNA Allele Fraction von Bredno, Joerg, Venn, Oliver, Chen, Xiaoji, Freese, Peter, Ofman, Joshua J.

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Arabidopsis meiotic crossover hot spots overlap with H2A.Z nucleosomes at gene promoters von Choi, Kyuha, Zhao, Xiaohui, Kelly, Krystyna A, Venn, Oliver, Higgins, James D, Yelina, Nataliya E, Hardcastle, Thomas J, Ziolkowski, Piotr A, Copenhaver, Gregory P, Franklin, F Chris H, McVean, Gil, Henderson, Ian R

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Multi-Cancer Early Detection Test Is Sensitive and Accurate in Detecting Shared DNA Methylation Signal in a Variety of Lymphoid and Plasma Cell Neoplasms von Westgate, Candace, Salles, Gilles, Shih, Stephannie, Lopatin, Margarita, Kurtzman, Kathryn N., Kappes, Katerina, Venn, Oliver, Parekh, Samir, Venstrom, Jeffrey M., Younes, Anas, Shaknovich, Rita

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