CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment von Manavski, Svetlin A, Valle, Giorgio

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The Accumulation of miRNAs Differentially Modulated by Drought Stress Is Affected by Grafting in Grapevine von Pagliarani, Chiara, Vitali, Marco, Ferrero, Manuela, Vitulo, Nicola, Incarbone, Marco, Lovisolo, Claudio, Valle, Giorgio, Schubert, Andrea

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Light Remodels Lipid Biosynthesis in Nannochloropsis gaditana by Modulating Carbon Partitioning between Organelles von Alboresi, Alessandro, Perin, Giorgio, Vitulo, Nicola, Diretto, Gianfranco, Block, Maryse, Jouhet, Juliette, Meneghesso, Andrea, Valle, Giorgio, Giuliano, Giovanni, Maréchal, Eric, Morosinotto, Tomas

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Chromosome Scale Genome Assembly and Transcriptome Profiling of Nannochloropsis gaditana in Nitrogen Depletion von Corteggiani Carpinelli, Elisa, Telatin, Andrea, Vitulo, Nicola, Forcato, Claudio, D’Angelo, Michela, Schiavon, Riccardo, Vezzi, Alessandro, Giacometti, Giorgio Mario, Morosinotto, Tomas, Valle, Giorgio

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A deep survey of alternative splicing in grape reveals changes in the splicing machinery related to tissue, stress condition and genotype von Vitulo, Nicola, Forcato, Claudio, Carpinelli, Elisa Corteggiani, Telatin, Andrea, Campagna, Davide, D'Angelo, Michela, Zimbello, Rosanna, Corso, Massimiliano, Vannozzi, Alessandro, Bonghi, Claudio, Lucchin, Margherita, Valle, Giorgio

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Mitochondria-rough-ER contacts in the liver regulate systemic lipid homeostasis von Anastasia, Irene, Ilacqua, Nicolò, Raimondi, Andrea, Lemieux, Philippe, Ghandehari-Alavijeh, Rana, Faure, Guilhem, Mekhedov, Sergei L., Williams, Kevin J., Caicci, Federico, Valle, Giorgio, Giacomello, Marta, Quiroga, Ariel D., Lehner, Richard, Miksis, Michael J., Toth, Katalin, de Aguiar Vallim, Thomas Q., Koonin, Eugene V., Scorrano, Luca, Pellegrini, Luca

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Comprehensive transcript profiling of two grapevine rootstock genotypes contrasting in drought susceptibility links the phenylpropanoid pathway to enhanced tolerance von Corso, Massimiliano, Vannozzi, Alessandro, Maza, Elie, Vitulo, Nicola, Meggio, Franco, Pitacco, Andrea, Telatin, Andrea, D’Angelo, Michela, Feltrin, Erika, Negri, Alfredo Simone, Prinsi, Bhakti, Valle, Giorgio, Ramina, Angelo, Bouzayen, Mondher, Bonghi, Claudio, Lucchin, Margherita

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A specific microbiota signature is associated to various degrees of ulcerative colitis as assessed by a machine learning approach von Barberio, Brigida, Facchin, Sonia, Patuzzi, Ilaria, Ford, Alexander C., Massimi, Davide, Valle, Giorgio, Sattin, Eleonora, Simionati, Barbara, Bertazzo, Elena, Zingone, Fabiana, Savarino, Edoardo Vincenzo

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Biocontrol traits of Bacillus licheniformis GL174, a culturable endophyte of Vitis vinifera cv. Glera von Nigris, Sebastiano, Baldan, Enrico, Tondello, Alessandra, Zanella, Filippo, Vitulo, Nicola, Favaro, Gabriella, Guidolin, Valerio, Bordin, Nicola, Telatin, Andrea, Barizza, Elisabetta, Marcato, Stefania, Zottini, Michela, Squartini, Andrea, Valle, Giorgio, Baldan, Barbara

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SNP-Discovery by RAD-Sequencing in a Germplasm Collection of Wild and Cultivated Grapevines (V. vinifera L.) von Marrano, Annarita, Birolo, Giovanni, Prazzoli, Maria Lucia, Lorenzi, Silvia, Valle, Giorgio, Grando, Maria Stella

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Longitudinal flux balance analyses of a patient with episodic colonic inflammation reveals microbiome metabolic dynamics von Basile, Arianna, Heinken, Almut, Hertel, Johannes, Smarr, Larry, Li, Weizhong, Treu, Laura, Valle, Giorgio, Campanaro, Stefano, Thiele, Ines

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Engineering a 3D in vitro model of human skeletal muscle at the single fiber scale von Urciuolo, Anna, Serena, Elena, Ghua, Rusha, Zatti, Susi, Giomo, Monica, Mattei, Nicolò, Vetralla, Massimo, Selmin, Giulia, Luni, Camilla, Vitulo, Nicola, Valle, Giorgio, Vitiello, Libero, Elvassore, Nicola

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Large-scale detection and analysis of RNA editing in grape mtDNA by RNA deep-sequencing von Picardi, Ernesto, Horner, David S, Chiara, Matteo, Schiavon, Riccardo, Valle, Giorgio, Pesole, Graziano

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Quantitative Proteomic Comparison of Rat Mitochondria from Muscle, Heart, and Liver von Forner, Francesca, Foster, Leonard J., Campanaro, Stefano, Valle, Giorgio, Mann, Matthias

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Scuba: scalable kernel-based gene prioritization von Zampieri, Guido, Tran, Dinh Van, Donini, Michele, Navarin, Nicolò, Aiolli, Fabio, Sperduti, Alessandro, Valle, Giorgio

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Microbial activity response to hydrogen injection in thermophilic anaerobic digesters revealed by genome-centric metatranscriptomics von Fontana, Alessandra, Kougias, Panagiotis G, Treu, Laura, Kovalovszki, Adam, Valle, Giorgio, Cappa, Fabrizio, Morelli, Lorenzo, Angelidaki, Irini, Campanaro, Stefano

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MicroRNA signatures in cardiac biopsies and detection of allograft rejection von Di Francesco, Andrea, Fedrigo, Marny, Santovito, Donato, Natarelli, Lucia, Castellani, Chiara, De Pascale, Fabio, Toscano, Giuseppe, Fraiese, Angela, Feltrin, Giuseppe, Benazzi, Elena, Nocco, Angela, Thiene, Gaetano, Valente, Marialuisa, Valle, Giorgio, Schober, Andreas, Gerosa, Gino, Angelini, Annalisa

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Genetic Analyses in Dent Disease and Characterization of CLCN5 Mutations in Kidney Biopsies von Gianesello, Lisa, Ceol, Monica, Bertoldi, Loris, Terrin, Liliana, Priante, Giovanna, Murer, Luisa, Peruzzi, Licia, Giordano, Mario, Paglialonga, Fabio, Cantaluppi, Vincenzo, Musetti, Claudio, Valle, Giorgio, Del Prete, Dorella, Anglani, Franca

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Grapevine Rootstocks Differentially Affect the Rate of Ripening and Modulate Auxin-Related Genes in Cabernet Sauvignon Berries von Corso, Massimiliano, Vannozzi, Alessandro, Ziliotto, Fiorenza, Zouine, Mohamed, Maza, Elie, Nicolato, Tommaso, Vitulo, Nicola, Meggio, Franco, Valle, Giorgio, Bouzayen, Mondher, Müller, Maren, Munné-Bosch, Sergi, Lucchin, Margherita, Bonghi, Claudio

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Editorial: Identification of phenotypically important genomic variants von Heron, Elizabeth A., Valle, Giorgio, Bernasconi, Anna

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