Protocol for mapping differential protein-protein interaction networks using affinity purification-mass spectrometry von Kaushal, Prashant, Ummadi, Manisha R., Jang, Gwendolyn M., Delgado, Yennifer, Makanani, Sara K., Alba, Kareem, Winters, Declan M., Blanc, Sophie F., Xu, Jiewei, Polacco, Benjamin, Zhou, Yuan, Stevenson, Erica, Eckhardt, Manon, Zuliani-Alvarez, Lorena, Kaake, Robyn, Swaney, Danielle L., Krogan, Nevan J., Bouhaddou, Mehdi

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Impact of SARS-CoV-2 ORF6 and its variant polymorphisms on host responses and viral pathogenesis von Kehrer, Thomas, Cupic, Anastasija, Ye, Chengjin, Yildiz, Soner, Bouhaddou, Mehdi, Crossland, Nicholas A., Barrall, Erika A., Cohen, Phillip, Tseng, Anna, Çağatay, Tolga, Rathnasinghe, Raveen, Flores, Daniel, Jangra, Sonia, Alam, Fahmida, Mena, Ignacio, Aslam, Sadaf, Saqi, Anjali, Rutkowska, Magdalena, Ummadi, Manisha R., Pisanelli, Giuseppe, Richardson, R. Blake, Veit, Ethan C., Fabius, Jacqueline M., Soucheray, Margaret, Polacco, Benjamin J., Ak, Baran, Marin, Arturo, Evans, Matthew J., Swaney, Danielle L., Gonzalez-Reiche, Ana S., Sordillo, Emilia M., van Bakel, Harm, Simon, Viviana, Zuliani-Alvarez, Lorena, Fontoura, Beatriz M.A., Rosenberg, Brad R., Krogan, Nevan J., Martinez-Sobrido, Luis, García-Sastre, Adolfo, Miorin, Lisa

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SARS-CoV-2 evolution balances conflicting roles of N protein phosphorylation von Syed, Abdullah M., Ciling, Alison, Chen, Irene P., Carlson, Christopher R., Adly, Armin N., Martin, Hannah S., Taha, Taha Y., Khalid, Mir M., Price, Nathan, Bouhaddou, Mehdi, Ummadi, Manisha R., Moen, Jack M., Krogan, Nevan J., Morgan, David O., Ott, Melanie, Doudna, Jennifer A.

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SARS-CoV-2 variants evolve convergent strategies to remodel the host response von Bouhaddou, Mehdi, Reuschl, Ann-Kathrin, Polacco, Benjamin J., Thorne, Lucy G., Ummadi, Manisha R., Ye, Chengjin, Rosales, Romel, Pelin, Adrian, Batra, Jyoti, Jang, Gwendolyn M., Xu, Jiewei, Moen, Jack M., Richards, Alicia L., Zhou, Yuan, Harjai, Bhavya, Stevenson, Erica, Rojc, Ajda, Ragazzini, Roberta, Whelan, Matthew V.X., Furnon, Wilhelm, De Lorenzo, Giuditta, Cowton, Vanessa, Syed, Abdullah M., Ciling, Alison, Deutsch, Noa, Pirak, Daniel, Dowgier, Giulia, Mesner, Dejan, Turner, Jane L., McGovern, Briana L., Rodriguez, M. Luis, Leiva-Rebollo, Rocio, Dunham, Alistair S., Zhong, Xiaofang, Eckhardt, Manon, Fossati, Andrea, Liotta, Nicholas F., Kehrer, Thomas, Cupic, Anastasija, Rutkowska, Magdalena, Mena, Ignacio, Aslam, Sadaf, Hoffert, Alyssa, Foussard, Helene, Olwal, Charles Ochieng’, Huang, Weiqing, Zwaka, Thomas, Pham, John, Lyons, Molly, Donohue, Laura, Griffin, Aliesha, Nugent, Rebecca, Holden, Kevin, Deans, Robert, Aviles, Pablo, Lopez-Martin, Jose A., Jimeno, Jose M., Obernier, Kirsten, Fabius, Jacqueline M., Soucheray, Margaret, Hüttenhain, Ruth, Jungreis, Irwin, Kellis, Manolis, Echeverria, Ignacia, Verba, Kliment, Bonfanti, Paola, Beltrao, Pedro, Sharan, Roded, Doudna, Jennifer A., Martinez-Sobrido, Luis, Patel, Arvind H., Palmarini, Massimo, Miorin, Lisa, White, Kris, Swaney, Danielle L., Garcia-Sastre, Adolfo, Jolly, Clare, Zuliani-Alvarez, Lorena, Towers, Greg J., Krogan, Nevan J.

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Mapping Differential Protein-Protein Interaction Networks using Affinity Purification Mass Spectrometry von Kaushal, Prashant, Ummadi, Manisha R, Jang, Gwendolyn M, Delgado, Yennifer, Makanani, Sara K, Blanc, Sophie F, Winters, Decan M, Xu, Jiewei, Polacco, Benjamin, Zhou, Yuan, Stevenson, Erica, Eckhardt, Manon, Zuliani-Alvarez, Lorena, Kaake, Robyn, Swaney, Danielle L, Krogan, Nevan, Bouhaddou, Mehdi

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Mapping Differential Protein-Protein Interaction Networks using Affinity Purification Mass Spectrometry von Kaushal, Prashant, Ummadi, Manisha R, Jang, Gwendolyn M, Delgado, Yennifer, Makanani, Sara K, Blanc, Sophie F, Winters, Decan M, Xu, Jiewei, Polacco, Benjamin, Zhou, Yuan, Stevenson, Erica, Eckhardt, Manon, Zuliani-Alvarez, Lorena, Kaake, Robyn, Swaney, Danielle L, Krogan, Nevan, Bouhaddou, Mehdi

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Mapping Differential Protein-Protein Interaction Networks using Affinity Purification Mass Spectrometry von Kaushal, Prashant, Ummadi, Manisha R, Jang, Gwendolyn M, Delgado, Yennifer, Makanani, Sara K, Blanc, Sophie F, Winters, Decan M, Xu, Jiewei, Polacco, Benjamin, Zhou, Yuan, Stevenson, Erica, Eckhardt, Manon, Zuliani-Alvarez, Lorena, Kaake, Robyn, Swaney, Danielle L, Krogan, Nevan, Bouhaddou, Mehdi

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