Fezf2 Orchestrates a Thymic Program of Self-Antigen Expression for Immune Tolerance von Takaba, Hiroyuki, Morishita, Yasuyuki, Tomofuji, Yoshihiko, Danks, Lynett, Nitta, Takeshi, Komatsu, Noriko, Kodama, Tatsuhiko, Takayanagi, Hiroshi

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Fibroblasts as a source of self-antigens for central immune tolerance von Nitta, Takeshi, Tsutsumi, Masanori, Nitta, Sachiko, Muro, Ryunosuke, Suzuki, Emma C., Nakano, Kenta, Tomofuji, Yoshihiko, Sawa, Shinichiro, Okamura, Tadashi, Penninger, Josef M., Takayanagi, Hiroshi

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Chd4 choreographs self-antigen expression for central immune tolerance von Tomofuji, Yoshihiko, Takaba, Hiroyuki, Suzuki, Hiroshi I., Benlaribi, Rayene, Martinez, Cristian David Peña, Abe, Yoshihiro, Morishita, Yasuyuki, Okamura, Tadashi, Taguchi, Akashi, Kodama, Tatsuhiko, Takayanagi, Hiroshi

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ETS1 governs pathological tissue-remodeling programs in disease-associated fibroblasts von Yan, Minglu, Komatsu, Noriko, Muro, Ryunosuke, Huynh, Nam Cong-Nhat, Tomofuji, Yoshihiko, Okada, Yukinori, Suzuki, Hiroshi I., Takaba, Hiroyuki, Kitazawa, Riko, Kitazawa, Sohei, Pluemsakunthai, Warunee, Mitsui, Yuichi, Satoh, Takashi, Okamura, Tadashi, Nitta, Takeshi, Im, Sin-Hyeog, Kim, Chan Johng, Kollias, George, Tanaka, Sakae, Okamoto, Kazuo, Tsukasaki, Masayuki, Takayanagi, Hiroshi

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SLE stratification based on BAFF and IFN-I bioactivity for biologics and implications of BAFF produced by glomeruli in lupus nephritis von Itotagawa, Eri, Tomofuji, Yoshihiko, Kato, Yasuhiro, Konaka, Hachiro, Tsujimoto, Kohei, Park, JeongHoon, Nagira, Daiki, Hirayama, Takehiro, Jo, Tatsunori, Hirano, Toru, Morita, Takayoshi, Nishide, Masayuki, Nishida, Sumiyuki, Shima, Yoshihito, Narazaki, Masashi, Okada, Yukinori, Takamatsu, Hyota, Kumanogoh, Atsushi

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Incomplete human reference genomes can drive false sex biases and expose patient-identifying information in metagenomic data von Guccione, Caitlin, Patel, Lucas, Tomofuji, Yoshihiko, McDonald, Daniel, Gonzalez, Antonio, Sepich-Poore, Gregory D., Sonehara, Kyuto, Zakeri, Mohsen, Chen, Yang, Dilmore, Amanda Hazel, Damle, Neil, Baranzini, Sergio E., Hightower, George, Nakatsuji, Teruaki, Gallo, Richard L., Langmead, Ben, Okada, Yukinori, Curtius, Kit, Knight, Rob

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OMARU: a robust and multifaceted pipeline for metagenome-wide association study von Kishikawa, Toshihiro, Tomofuji, Yoshihiko, Inohara, Hidenori, Okada, Yukinori

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Analysis of gut microbiome, host genetics, and plasma metabolites reveals gut microbiome-host interactions in the Japanese population von Tomofuji, Yoshihiko, Kishikawa, Toshihiro, Sonehara, Kyuto, Maeda, Yuichi, Ogawa, Kotaro, Kawabata, Shuhei, Oguro-Igashira, Eri, Okuno, Tatsusada, Nii, Takuro, Kinoshita, Makoto, Takagaki, Masatoshi, Yamamoto, Kenichi, Arase, Noriko, Yagita-Sakamaki, Mayu, Hosokawa, Akiko, Motooka, Daisuke, Matsumoto, Yuki, Matsuoka, Hidetoshi, Yoshimura, Maiko, Ohshima, Shiro, Nakamura, Shota, Fujimoto, Manabu, Inohara, Hidenori, Kishima, Haruhiko, Mochizuki, Hideki, Takeda, Kiyoshi, Kumanogoh, Atsushi, Okada, Yukinori

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Successful treatment of refractory acute lupus haemophagocytic syndrome using rituximab: a case report von Tomofuji, Yoshihiko, Ishikawa, Yuichi, Hattori, Koto, Fujiwara, Michio, Kita, Yasuhiko

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Identification of serum metabolome signatures associated with retinal and renal complications of type 2 diabetes von Tomofuji, Yoshihiko, Suzuki, Ken, Kishikawa, Toshihiro, Shojima, Nobuhiro, Hosoe, Jun, Inagaki, Kyoko, Matsubayashi, Sunao, Ishihara, Hisamitsu, Watada, Hirotaka, Ishigaki, Yasushi, Inohara, Hidenori, Murakami, Yoshinori, Matsuda, Koichi, Okada, Yukinori, Yamauchi, Toshimasa, Kadowaki, Takashi

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A case of complete atrioventricular block in secondary hemophagocytic syndrome/hemophagocytic lymphohistiocytosis recovered by plasma exchange and cytokine absorbing therapy with A... von Harano, Yoshihiro, Ishikawa, Yuichi, Hattori, Koto, Ichinose, Mami, Tomofuji, Yoshihiko, Okano, Hiroshi, Owada, Gen, Kimura, Yasuhiro, Nanao, Taikan, Fujimoto, Junichi, Nishizawa, Hideo, Iioka, Yuto, Osada, Jun, Fujiwara, Michio, Kita, Yasuhiko

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Single-cell RNA sequencing of peripheral blood links cell-type-specific regulation of splicing to autoimmune and inflammatory diseases von Tian, Chi, Zhang, Yuntian, Tong, Yihan, Kock, Kian Hong, Sim, Donald Yuhui, Liu, Fei, Dong, Jiaqi, Jing, Zhixuan, Wang, Wenjing, Gao, Junbin, Tan, Le Min, Han, Kyung Yeon, Tomofuji, Yoshihiko, Nakano, Masahiro, Buyamin, Eliora Violain, Sonthalia, Radhika, Ando, Yoshinari, Hatano, Hiroaki, Sonehara, Kyuto, Jin, Xin, Loh, Marie, Chambers, John, Hon, Chung-Chau, Choi, Murim, Park, Jong-Eun, Ishigaki, Kazuyoshi, Okamura, Tomohisa, Fujio, Keishi, Okada, Yukinori, Park, Woong-Yang, Shin, Jay W., Roca, Xavier, Prabhakar, Shyam, Liu, Boxiang

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Reconstruction of the personal information from human genome reads in gut metagenome sequencing data von Tomofuji, Yoshihiko, Sonehara, Kyuto, Kishikawa, Toshihiro, Maeda, Yuichi, Ogawa, Kotaro, Kawabata, Shuhei, Nii, Takuro, Okuno, Tatsusada, Oguro-Igashira, Eri, Kinoshita, Makoto, Takagaki, Masatoshi, Yamamoto, Kenichi, Kurakawa, Takashi, Yagita-Sakamaki, Mayu, Hosokawa, Akiko, Motooka, Daisuke, Matsumoto, Yuki, Matsuoka, Hidetoshi, Yoshimura, Maiko, Ohshima, Shiro, Nakamura, Shota, Inohara, Hidenori, Kishima, Haruhiko, Mochizuki, Hideki, Takeda, Kiyoshi, Kumanogoh, Atsushi, Okada, Yukinori

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Prokaryotic and viral genomes recovered from 787 Japanese gut metagenomes revealed microbial features linked to diets, populations, and diseases von Tomofuji, Yoshihiko, Kishikawa, Toshihiro, Maeda, Yuichi, Ogawa, Kotaro, Otake-Kasamoto, Yuriko, Kawabata, Shuhei, Nii, Takuro, Okuno, Tatsusada, Oguro-Igashira, Eri, Kinoshita, Makoto, Takagaki, Masatoshi, Oyama, Naoki, Todo, Kenichi, Yamamoto, Kenichi, Sonehara, Kyuto, Yagita, Mayu, Hosokawa, Akiko, Motooka, Daisuke, Matsumoto, Yuki, Matsuoka, Hidetoshi, Yoshimura, Maiko, Ohshima, Shiro, Shinzaki, Shinichiro, Nakamura, Shota, Iijima, Hideki, Inohara, Hidenori, Kishima, Haruhiko, Takehara, Tetsuo, Mochizuki, Hideki, Takeda, Kiyoshi, Kumanogoh, Atsushi, Okada, Yukinori

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Successful treatment of refractory acute lupus haemophagocytic syndrome using rituximab: a case report von Tomofuji, Yoshihiko, Ishikawa, Yuichi, Hattori, Koto, Fujiwara, Michio, Kita, Yasuhiko

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METHOD FOR EXAMINING AUTOIMMUNE DISEASE von KISHIKAWA, Toshihiro, TOMOFUJI, Yoshihiko, OKADA, Yukinori

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Fibroblasts as a source of self-antigens for central immune tolerance von Nitta, Takeshi, Tsutsumi, Masanori, Nitta, Sachiko, Muro, Ryunosuke, Suzuki, Emma C, Nakano, Kenta, Tomofuji, Yoshihiko

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Fibroblasts as a source of self-antigens for central immune tolerance von Nitta, Takeshi, Tsutsumi, Masanori, Nitta, Sachiko, Muro, Ryunosuke, Suzuki, Emma C, Nakano, Kenta, Tomofuji, Yoshihiko

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Chd4 choreographs self-antigen expression for central immune tolerance von Tomofuji, Yoshihiko, Takaba, Hiroyuki, Suzuki, Hiroshi I, Benlaribi, Rayene, Ma, Abe, Yoshihiro, Morishita, Yasuyuki

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METHOD FOR TESTING SYSTEMIC LUPUS ERYTHEMATOSUS von MAEDA YUICHI, TOMOFUJI YOSHIHIKO, ITO ERI, KISHIKAWA TOSHIHIRO, OKADA YUKINORI

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