Genome-culture coevolution promotes rapid divergence of killer whale ecotypes von Foote, Andrew D., Vijay, Nagarjun, Ávila-Arcos, María C., Baird, Robin W., Durban, John W., Fumagalli, Matteo, Gibbs, Richard A., Hanson, M. Bradley, Korneliussen, Thorfinn S., Martin, Michael D., Robertson, Kelly M., Sousa, Vitor C., Vieira, Filipe G., Vinař, Tomáš, Wade, Paul, Worley, Kim C., Excoffier, Laurent, Morin, Phillip A., Gilbert, M. Thomas P., Wolf, Jochen B.W.

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Evolutionary genetics and implications of small size and twinning in callitrichine primates von Harris, R. Alan, Tardif, Suzette D., Vinar, Tomas, Wildman, Derek E., Rutherford, Julienne N., Rogers, Jeffrey, Worley, Kim C., Aagaard, Kjersti M.

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Massive programmed translational jumping in mitochondria von Lang, B. Franz, Jakubkova, Michaela, Hagedusova, Eva, Daoud, Rachid, Forget, Lise, Brejova, Brona, Vinar, Tomas, Kosa, Peter, Fricova, Dominika, Nebohacova, Martina, Griac, Peter, Tomaska, Lubomir, Burger, Gertraud, Nosek, Jozef

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Evolution of linear chromosomes and multipartite genomes in yeast mitochondria von Valach, Matus, Farkas, Zoltan, Fricova, Dominika, Kovac, Jakub, Brejova, Brona, Vinar, Tomas, Pfeiffer, Ilona, Kucsera, Judit, Tomaska, Lubomir, Lang, B Franz, Nosek, Jozef

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A draft genome sequence of the elusive giant squid, Architeuthis dux von da Fonseca, Rute R, Couto, Alvarina, Machado, Andre M, Brejova, Brona, Albertin, Carolin B, Silva, Filipe, Gardner, Paul, Baril, Tobias, Hayward, Alex, Campos, Alexandre, Ribeiro, Ângela M, Barrio-Hernandez, Inigo, Hoving, Henk-Jan, Tafur-Jimenez, Ricardo, Chu, Chong, Frazão, Barbara, Petersen, Bent, Peñaloza, Fernando, Musacchia, Francesco, Alexander, Graham C, Osório, Hugo, Winkelmann, Inger, Simakov, Oleg, Rasmussen, Simon, Rahman, M Ziaur, Pisani, Davide, Vinther, Jakob, Jarvis, Erich, Zhang, Guojie, Strugnell, Jan M, Castro, L Filipe C, Fedrigo, Olivier, Patricio, Mateus, Li, Qiye, Rocha, Sara, Antunes, Agostinho, Wu, Yufeng, Ma, Bin, Sanges, Remo, Vinar, Tomas, Blagoev, Blagoy, Sicheritz-Ponten, Thomas, Nielsen, Rasmus, Gilbert, M Thomas P

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Sequencing the genome of Marssonina brunnea reveals fungus-poplar co-evolution von Zhu, Sheng, Cao, You-Zhi, Jiang, Cong, Tan, Bi-Yue, Wang, Zhong, Feng, Sisi, Zhang, Liang, Su, Xiao-Hua, Brejova, Brona, Vinar, Tomas, Xu, Meng, Wang, Ming-Xiu, Zhang, Shou-Gong, Huang, Min-Ren, Wu, Rongling, Zhou, Yan

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Monoclonal antibodies targeting two immunodominant epitopes on the Spike protein neutralize emerging SARS-CoV-2 variants of concern von Kovacech, Branislav, Fialova, Lubica, Filipcik, Peter, Skrabana, Rostislav, Zilkova, Monika, Paulenka-Ivanovova, Natalia, Kovac, Andrej, Palova, Denisa, Rolkova, Gabriela Paulikova, Tomkova, Katarina, Csokova, Natalia Turic, Markova, Karina, Skrabanova, Michaela, Sinska, Kristina, Basheer, Neha, Majerova, Petra, Hanes, Jozef, Parrak, Vojtech, Prcina, Michal, Cehlar, Ondrej, Cente, Martin, Piestansky, Juraj, Fresser, Michal, Novak, Michal, Slavikova, Monika, Borsova, Kristina, Cabanova, Viktoria, Brejova, Bronislava, Vinař, Tomas, Nosek, Jozef, Klempa, Boris, Eyer, Ludek, Hönig, Vaclav, Palus, Martin, Ruzek, Daniel, Vyhlidalova, Tereza, Strakova, Petra, Mrazkova, Blanka, Zudova, Dagmar, Koubkova, Gizela, Novosadova, Vendula, Prochazka, Jan, Sedlacek, Radislav, Zilka, Norbert, Kontsekova, Eva

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Population genomic analysis reveals a rich speciation and demographic history of orang-utans (Pongo pygmaeus and Pongo abelii) von Ma, Xin, Kelley, Joanna L, Eilertson, Kirsten, Musharoff, Shaila, Degenhardt, Jeremiah D, Martins, André L, Vinar, Tomas, Kosiol, Carolin, Siepel, Adam, Gutenkunst, Ryan N, Bustamante, Carlos D

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DeepNano: Deep recurrent neural networks for base calling in MinION nanopore reads von Boza, Vladimír, Vinar, Tomás, Brejová, Brona

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Comparative Genomics: 20th International Conference, RECOMB-CG 2023, Istanbul, Turkey, April 14-15, 2023, Proceedings von Jahn, Katharina, Vinař, Tomás

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Patterns of positive selection in six Mammalian genomes von Kosiol, Carolin, Vinar, Tomás, da Fonseca, Rute R, Hubisz, Melissa J, Bustamante, Carlos D, Nielsen, Rasmus, Siepel, Adam

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The genome of the hydatid tapeworm Echinococcus granulosus von Zheng, Huajun, Zhang, Wenbao, Zhang, Liang, Zhang, Zhuangzhi, Li, Jun, Lu, Gang, Zhu, Yongqiang, Wang, Yuezhu, Huang, Yin, Liu, Jing, Kang, Hui, Chen, Jie, Wang, Lijun, Chen, Aojun, Yu, Shuting, Gao, Zhengchao, Jin, Lei, Gu, Wenyi, Wang, Zhiqin, Zhao, Li, Shi, Baoxin, Wen, Hao, Lin, Renyong, Jones, Malcolm K, Brejova, Brona, Vinar, Tomas, Zhao, Guoping, McManus, Donald P, Chen, Zhu, Zhou, Yan, Wang, Shengyue

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Nanopore base calling on the edge von Perešíni, Peter, Boža, Vladimír, Brejová, Broňa, Vinař, Tomáš

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Nanopore sequencing of SARS-CoV-2: Comparison of short and long PCR-tiling amplicon protocols von Brejová, Brona, Borsová, Kristína, Hodorová, Viktória, Cabanová, Viktória, Gafurov, Askar, Fricová, Dominika, Nebohácová, Martina, Vinar, Tomás, Klempa, Boris, Nosek, Jozef

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The common marmoset genome provides insight into primate biology and evolution von Worley, Kim C, Warren, Wesley C, Rogers, Jeffrey, Locke, Devin, Muzny, Donna M, Mardis, Elaine R, Weinstock, George M, Tardif, Suzette D, Aagaard, Kjersti M, Archidiacono, Nicoletta, Wang, Qing, Warner, Crystal M, Wildman, Derek E, Witherspoon, David J, Wright, Rita A, Wu, Yuanqing, Xiao, Weimin, Xing, Jinchuan, Zhu, Baoli, Rayan, Nirmala Arul, Gibbs, Richard A, Wilson, Richard K, Batzer, Mark A, Beal, Kathryn, Brejova, Brona, Capozzi, Oronzo, Capuano, Saverio B, Casola, Claudio, Chandrabose, Mimi M, Dao, Marvin Diep, de Jong, Pieter J, del Rosario, Ricardo Cruz-Herrera, Delehaunty, Kkim D, Dinh, Huyen H, Eichler, Evan E, Fitzgerald, Stephen, Flicek, Paul, Fowler, R Gerald, Fronick, Catrina, Fulton, Lucinda A, Fulton, Robert S, Gabisi, Ramatu Ayiesha, Gerlach, Daniel, Graves, Tina A, Gunaratne, Preethi H, Hahn, Matthew W, Haig, David, Han, Yi, Harris, R Alan, Herrero, Javier, Hillier, LaDdeana W, Hubley, Robert, Jhangiani, Shalini N, Jorde, Lynn B, Joshi, Vandita, Karakor, Emre, Konkel, Miriam K, Kovar, Christie L, Kriventseva, Evgenia V, Lee, Sandra L, Liu, Yih-shin, Lopez, John, Lopez-Otin, Carlos, Mansfield, Keith G, Marques-Bonet, Tomas, Minx, Patrick, Misceo, Doriana, Moncrieff, J Scott, Morgan, Margaret B, Nazareth, Lynne V, Newsham, Irene, Nguyen, Ngoc Bich, Okwuonu, Geoffrey O, Prabhakar, Shyam, Pu, Ling-Ling, Quesada, Victor, Ranck, Megan C, Raney, Brian J, Deiros, David Rio, Rocchi, Mariano, Rodriguez, David, Ross, Corinna, Ruffier, Magali, Ruiz, San Juana, Sajjadian, Saba, Santibanez, Jireh, Schrider, Daniel R, Searle, Steve, Skaletsky, Helen, Soibam, Benjamin, Smit, Arian F A, Tennakoon, Jayantha B, Tomaska, Lubomir, Ullmer, Brygg, Vejnar, Charles E, Ventura, Mario, Vilella, Albert J, Vinar, Tomas, Vogel, Jan-Hinnerk, Walker, Jerilyn A

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DeepNano-blitz: a fast base caller for MinION nanopore sequencers von Boža, Vladimír, Perešíni, Peter, Brejová, Broňa, Vinař, Tomáš

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Comparative and demographic analysis of orang-utan genomes von Locke, Devin P., Hillier, LaDeana W., Warren, Wesley C., Worley, Kim C., Nazareth, Lynne V., Muzny, Donna M., Yang, Shiaw-Pyng, Wang, Zhengyuan, Chinwalla, Asif T., Minx, Pat, Mitreva, Makedonka, Cook, Lisa, Delehaunty, Kim D., Fronick, Catrina, Schmidt, Heather, Fulton, Lucinda A., Fulton, Robert S., Nelson, Joanne O., Magrini, Vincent, Pohl, Craig, Graves, Tina A., Markovic, Chris, Cree, Andy, Dinh, Huyen H., Hume, Jennifer, Kovar, Christie L., Lunter, Gerton, Meader, Stephen, Heger, Andreas, Ponting, Chris P., Marques-Bonet, Tomas, Alkan, Can, Chen, Lin, Cheng, Ze, Kidd, Jeffrey M., Eichler, Evan E., White, Simon, Searle, Stephen, Vilella, Albert J., Chen, Yuan, Flicek, Paul, Ma, Jian, Raney, Brian, Suh, Bernard, Burhans, Richard, Herrero, Javier, Haussler, David, Faria, Rui, Fernando, Olga, Darré, Fleur, Farré, Domènec, Gazave, Elodie, Oliva, Meritxell, Navarro, Arcadi, Roberto, Roberta, Capozzi, Oronzo, Archidiacono, Nicoletta, Valle, Giuliano Della, Purgato, Stefania, Rocchi, Mariano, Konkel, Miriam K., Walker, Jerilyn A., Ullmer, Brygg, Batzer, Mark A., Smit, Arian F. A., Hubley, Robert, Casola, Claudio, Schrider, Daniel R., Hahn, Matthew W., Quesada, Victor, Puente, Xose S., Ordoñez, Gonzalo R., López-Otín, Carlos, Vinar, Tomas, Brejova, Brona, Ratan, Aakrosh, Harris, Robert S., Miller, Webb, Kosiol, Carolin, Lawson, Heather A., Taliwal, Vikas, Martins, André L., Siepel, Adam, RoyChoudhury, Arindam, Ma, Xin, Degenhardt, Jeremiah, Bustamante, Carlos D., Gutenkunst, Ryan N., Mailund, Thomas, Dutheil, Julien Y., Hobolth, Asger, Schierup, Mikkel H., Ryder, Oliver A., Yoshinaga, Yuko, de Jong, Pieter J., Weinstock, George M., Rogers, Jeffrey, Mardis, Elaine R., Gibbs, Richard A., Wilson, Richard K.

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The sequence and de novo assembly of the giant panda genome von Wang, Jian, Wang, Jun, Li, Ruiqiang, Fan, Wei, Tian, Geng, He, Lin, Cai, Jing, Huang, Quanfei, Cai, Qingle, Li, Bo, Bai, Yinqi, Zhang, Zhihe, Zhang, Yaping, Wang, Wen, Wei, Fuwen, Li, Heng, Jian, Min, Li, Jianwen, Zhang, Zhaolei, Nielsen, Rasmus, Li, Dawei, Gu, Wanjun, Yang, Zhentao, Xuan, Zhaoling, Ryder, Oliver A, Leung, Frederick Chi-Ching, Cao, Jianjun, Fang, Xiaodong, Hou, Rong, Shen, Fujun, Mu, Bo, Lin, Runmao, Qian, Wubin, Wang, Guodong, Yu, Chang, Nie, Wenhui, Wu, Zhigang, Liang, Huiqing, Wu, Qi, Cheng, Shifeng, Ruan, Jue, Wang, Mingwei, Shi, Zhongbin, Ren, Xiaoli, Zheng, Huisong, Dong, Dong, Cook, Kathleen, Zhang, Hao, Kosiol, Carolin, Xie, Xueying, Lu, Zuhong, Zheng, Hancheng, Li, Yingrui, Steiner, Cynthia C, Lam, Tommy Tsan-Yuk, Lin, Siyuan, Zhang, Qinghui, Li, Guoqing, Gong, Timing, Zhang, Dejin, Fang, Lin, Ye, Chen, Zhang, Juanbin, Hu, Wenbo, Xu, Anlong, Ren, Yuanyuan, Bruford, Michael W, Li, Qibin, Ma, Lijia, Guo, Yiran, An, Na, Hu, Yujie, Zheng, Yang, Shi, Yongyong, Li, Zhiqiang, Liu, Qing, Chen, Yanling, Zhao, Jing, Qu, Ning, Zhao, Shancen, Tian, Feng, Wang, Xiaoling, Xu, Lizhi, Liu, Xiao, Vinar, Tomas, Lam, Tak-Wah, Yiu, Siu-Ming, Liu, Shiping, Li, Desheng, Huang, Yan, Wang, Xia, Yang, Guohua, Jiang, Zhi, Qin, Nan, Li, Li, Li, Jingxiang, Bolund, Lars, Olson, Maynard, Zhang, Xiuqing, Li, Songgang

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PlasBin-flow: a flow-based MILP algorithm for plasmid contigs binning von Mane, Aniket, Faizrahnemoon, Mahsa, Vinař, Tomáš, Brejová, Broňa, Chauve, Cedric

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The Schistosoma japonicum genome reveals features of host-parasite interplay von Zhou, Yan, Zheng, Huajun, Chen, Yangyi, Zhang, Lei, Wang, Kai, Guo, Jing, Huang, Zhen, Zhang, Bo, Huang, Wei, Jin, Ke, Dou, Tonghai, Hasegawa, Masami, Wang, Li, Zhang, Yuan, Zhou, Jie, Tao, Lin, Cao, Zhiwei, Li, Yixue, Vinar, Tomas, Brejova, Brona, Brown, Dan, Li, Ming, Miller, David J, Blair, David, Zhong, Yang, Chen, Zhu, Liu, Feng, Hu, Wei, Wang, Zhi-Qin, Zhang, Qin-Hua, Song, Huai-Dong, Chen, Saijuan, Xu, Xuenian, Xu, Bin, Ju, Chuan, Huang, Yucheng, Brindley, Paul J, McManus, Donald P, Feng, Zheng, Han, Ze-Guang, Lu, Gang, Ren, Shuangxi, Wang, Yuezhu, Gu, Wenyi, Kang, Hui, Chen, Jie, Chen, Xiaoyun, Chen, Shuting, Wang, Lijun, Yan, Jie, Wang, Biyun, Lv, Xinyan, Jin, Lei, Wang, Bofei, Pu, Shiyin, Zhang, Xianglin, Zhang, Wei, Hu, Qiuping, Zhu, Genfeng, Wang, Jun, Yu, Jun, Wang, Jian, Yang, Huanming, Ning, Zemin, Beriman, Matthew, Wei, Chia-Lin, Ruan, Yijun, Zhao, Guoping, Wang, Shengyue, Zhang, Qin-hua

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