GPQuest: A Spectral Library Matching Algorithm for Site-Specific Assignment of Tandem Mass Spectra to Intact N‑glycopeptides von Toghi Eshghi, Shadi, Shah, Punit, Yang, Weiming, Li, Xingde, Zhang, Hui

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Comparison of Enrichment Methods for Intact N- and O‑Linked Glycopeptides Using Strong Anion Exchange and Hydrophilic Interaction Liquid Chromatography von Yang, Weiming, Shah, Punit, Hu, Yingwei, Toghi Eshghi, Shadi, Sun, Shisheng, Liu, Yang, Zhang, Hui

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A targeted amplicon next-generation sequencing assay for tryptase genotyping to support personalized therapy in mast cell-related disorders von Li, Olga, Hackney, Jason A, Choy, David F, Chang, Diana, Nersesian, Rhea, Staton, Tracy L, Cai, Fang, Toghi Eshghi, Shadi

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Classification of Tandem Mass Spectra for Identification of N- and O-linked Glycopeptides von Toghi Eshghi, Shadi, Yang, Weiming, Hu, Yingwei, Shah, Punit, Sun, Shisheng, Li, Xingde, Zhang, Hui

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Imaging of N‑Linked Glycans from Formalin-Fixed Paraffin-Embedded Tissue Sections Using MALDI Mass Spectrometry von Toghi Eshghi, Shadi, Yang, Shuang, Wang, Xiangchun, Shah, Punit, Li, Xingde, Zhang, Hui

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Quantitative Comparison of Conventional and t-SNE-guided Gating Analyses von Toghi Eshghi, Shadi, Au-Yeung, Amelia, Takahashi, Chikara, Bolen, Christopher R, Nyachienga, Maclean N, Lear, Sean P, Green, Cherie, Mathews, W Rodney, O'Gorman, William E

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Glycoform Analysis of Recombinant and Human Immunodeficiency Virus Envelope Protein gp120 via Higher Energy Collisional Dissociation and Spectral-Aligning Strategy von Yang, Weiming, Shah, Punit, Toghi Eshghi, Shadi, Yang, Shuang, Sun, Shisheng, Ao, Minghui, Rubin, Abigail, Jackson, J. Brooks, Zhang, Hui

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Quality assessment and interference detection in targeted mass spectrometry data using machine learning von Toghi Eshghi, Shadi, Auger, Paul, Mathews, W Rodney

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Glycomic Analysis by Glycoprotein Immobilization for Glycan Extraction and Liquid Chromatography on Microfluidic Chip von Yang, Shuang, Toghi Eshghi, Shadi, Chiu, Hanching, DeVoe, Don L, Zhang, Hui

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Targeted Analyte Detection by Standard Addition Improves Detection Limits in Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry von Toghi Eshghi, Shadi, Li, Xingde, Zhang, Hui

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Integrated Proteomic and Glycoproteomic Analyses of Prostate Cancer Cells Reveal Glycoprotein Alteration in Protein Abundance and Glycosylation von Shah, Punit, Wang, Xiangchun, Yang, Weiming, Toghi Eshghi, Shadi, Sun, Shisheng, Hoti, Naseruddin, Chen, Lijun, Yang, Shuang, Pasay, Jered, Rubin, Abby, Zhang, Hui

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Comprehensive analysis of protein glycosylation by solid-phase extraction of N-linked glycans and glycosite-containing peptides von Sun, Shisheng, Shah, Punit, Eshghi, Shadi Toghi, Yang, Weiming, Trikannad, Namita, Yang, Shuang, Chen, Lijun, Aiyetan, Paul, Höti, Naseruddin, Zhang, Zhen, Chan, Daniel W, Zhang, Hui

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Development of a therapeutic anti-HtrA1 antibody and the identification of DKK3 as a pharmacodynamic biomarker in geographic atrophy von Tom, Irene, Pham, Victoria C., Katschke, Kenneth J., Li, Wei, Liang, Wei-Ching, Gutierrez, Johnny, Young, Andrew Ah, Figueroa, Isabel, Eshghi, Shadi Toghi, Lee, ChingWei V., Kanodia, Jitendra, Snipas, Scott J., Salvesen, Guy S., Lai, Phillip, Honigberg, Lee, van Lookeren Campagne, Menno, Kirchhofer, Daniel, Baruch, Amos, Lill, Jennie R.

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Epithelium percentage estimation facilitates epithelial quantitative protein measurement in tissue specimens von Chen, Jing, Toghi Eshghi, Shadi, Bova, George Steven, Li, Qing Kay, Li, Xingde, Zhang, Hui

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Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and α‑1B-Glycoprotein von Sun, Shisheng, Hu, Yingwei, Jia, Li, Eshghi, Shadi Toghi, Liu, Yang, Shah, Punit, Zhang, Hui

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Chemoenzymatic method for glycomics: Isolation, identification, and quantitation von Yang, Shuang, Rubin, Abigail, Eshghi, Shadi Toghi, Zhang, Hui

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Su1747 REWIRING OF PATHWAY INTERACTIONS IN INFLAMED TISSUE OF ULCERATIVE COLITIS PATIENTS POINTS TO SPECIFIC LIGANDRECEPTOR ACTIVITIES ON NEUTROPHIL AND MACROPHAGE SUBSETS von Mazrooei, Parisa, Quintanilla, Luis, Gubatan, John Mark, Eshghi, Shadi Toghi, Au-Yeung, Amelia, Holman, Derek, Takahashi, Chikara, O'Gorman, William, Rogalla, Stephan, McBride, Jacqueline M., Hackney, Jason A.

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Evaluation of oligonucleotide conjugated antibodies as reporter molecules in single-cell assays von Takahashi, Chikara, Au-Yeung, Amelia, Gutierrez, Johnny, Toghi-Eshghi, Shadi, Mathews, Rod, O’Gorman, William

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Tu1746 SINGLE-CELL TRANSCRIPTOMICS REVEAL TISSUE NEUTROPHIL HETEROGENEITY AND NEUTROPHIL-INFLAMMATORY FIBROBLAST SIGNALING PATHWAYS ASSOCIATED WITH RESISTANCE TO APPROVED THERAPIES... von Gubatan, John Mark, Eshghi, Shadi Toghi, Mazrooei, Parisa, Quintanilla, Luis, Sojwal, Raoul S., Au-Yeung, Amelia, Holman, Derek, O'Gorman, William, Rosen, Michael J., Galli, Stephen, McBride, Jacqueline M., Jason, Hackney, Rogalla, Stephan

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Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and a-1B-Glycoprotein von Sun, Shisheng, Hu, Yingwei, Jia, Li, Eshghi, Shadi Toghi, Liu, Yang, Shah, Punit, Zhang, Hui

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