How open science helps researchers succeed von McKiernan, Erin C, Bourne, Philip E, Brown, C Titus, Buck, Stuart, Kenall, Amye, Lin, Jennifer, McDougall, Damon, Nosek, Brian A, Ram, Karthik, Soderberg, Courtney K, Spies, Jeffrey R, Thaney, Kaitlin, Updegrove, Andrew, Woo, Kara H, Yarkoni, Tal

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FunGene: the functional gene pipeline and repository von Fish, Jordan A, Chai, Benli, Wang, Qiong, Sun, Yanni, Brown, C Titus, Tiedje, James M, Cole, James R

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Ribosomal Database Project: data and tools for high throughput rRNA analysis von Cole, James R, Wang, Qiong, Fish, Jordan A, Chai, Benli, McGarrell, Donna M, Sun, Yanni, Brown, C Titus, Porras-Alfaro, Andrea, Kuske, Cheryl R, Tiedje, James M

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Large-scale sequence comparisons with sourmash [version 1; peer review: 2 approved] von Pierce, N. Tessa, Irber, Luiz, Reiter, Taylor, Brooks, Phillip, Brown, C. Titus

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Evaluation of taxonomic classification and profiling methods for long-read shotgun metagenomic sequencing datasets von Portik, Daniel M, Brown, C Titus, Pierce-Ward, N Tessa

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Tackling soil diversity with the assembly of large, complex metagenomes von Howe, Adina Chuang, Jansson, Janet K., Malfatti, Stephanie A., Tringe, Susannah G., Tiedje, James M., Brown, C. Titus

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Centromere location in Arabidopsis is unaltered by extreme divergence in CENH3 protein sequence von Maheshwari, Shamoni, Ishii, Takayoshi, Brown, C Titus, Houben, Andreas, Comai, Luca

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Best practices for scientific computing von Wilson, Greg, Aruliah, D A, Brown, C Titus, Chue Hong, Neil P, Davis, Matt, Guy, Richard T, Haddock, Steven H D, Huff, Kathryn D, Mitchell, Ian M, Plumbley, Mark D, Waugh, Ben, White, Ethan P, Wilson, Paul

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A phylogenetically novel cyanobacterium most closely related to Gloeobacter von Grettenberger, Christen L., Sumner, Dawn Y., Wall, Kate, Brown, C. Titus, Eisen, Jonathan A., Mackey, Tyler J., Hawes, Ian, Jospin, Guillaume, Jungblut, Anne D.

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Microbial metabolites in the marine carbon cycle von Moran, Mary Ann, Kujawinski, Elizabeth B., Schroer, William F., Amin, Shady A., Bates, Nicholas R., Bertrand, Erin M., Braakman, Rogier, Brown, C. Titus, Covert, Markus W., Doney, Scott C., Dyhrman, Sonya T., Edison, Arthur S., Eren, A. Murat, Levine, Naomi M., Li, Liang, Ross, Avena C., Saito, Mak A., Santoro, Alyson E., Segrè, Daniel, Shade, Ashley, Sullivan, Matthew B., Vardi, Assaf

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Genomic and phenotypic analyses of six offspring of a genome-edited hornless bull von Young, Amy E., Mansour, Tamer A., McNabb, Bret R., Owen, Joseph R., Trott, Josephine F., Brown, C. Titus, Van Eenennaam, Alison L.

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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs von Pell, Jason, Hintze, Arend, Canino-Koning, Rosangela, Howe, Adina, Tiedje, James M, Brown, C. Titus

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Strain recovery from metagenomes von Brown, C Titus

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These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure von Zhang, Qingpeng, Pell, Jason, Canino-Koning, Rosangela, Howe, Adina Chuang, Brown, C Titus

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Re-assembly, quality evaluation, and annotation of 678 microbial eukaryotic reference transcriptomes von Johnson, Lisa K, Alexander, Harriet, Brown, C Titus

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Xander: employing a novel method for efficient gene-targeted metagenomic assembly von Wang, Qiong, Fish, Jordan A, Gilman, Mariah, Sun, Yanni, Brown, C Titus, Tiedje, James M, Cole, James R

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MQF and buffered MQF: quotient filters for efficient storage of k-mers with their counts and metadata von Shokrof, Moustafa, Brown, C Titus, Mansour, Tamer A

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Exploring neighborhoods in large metagenome assembly graphs using spacegraphcats reveals hidden sequence diversity von Brown, C Titus, Moritz, Dominik, O'Brien, Michael P, Reidl, Felix, Reiter, Taylor, Sullivan, Blair D

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Genomic characterization of a diazotrophic microbiota associated with maize aerial root mucilage von Higdon, Shawn M, Pozzo, Tania, Kong, Nguyet, Huang, Bihua C, Yang, Mai Lee, Jeannotte, Richard, Brown, C. Titus, Bennett, Alan B, Weimer, Bart C

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Microbial Community Analysis with Ribosomal Gene Fragments from Shotgun Metagenomes von Guo, Jiarong, Cole, James R, Zhang, Qingpeng, Brown, C Titus, Tiedje, James M

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