Seq2Logo: a method for construction and visualization of amino acid binding motifs and sequence profiles including sequence weighting, pseudo counts and two-sided representation of... von Thomsen, Martin Christen Frølund, Nielsen, Morten

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A Bacterial Analysis Platform: An Integrated System for Analysing Bacterial Whole Genome Sequencing Data for Clinical Diagnostics and Surveillance von Thomsen, Martin Christen Frølund, Ahrenfeldt, Johanne, Cisneros, Jose Luis Bellod, Jurtz, Vanessa, Larsen, Mette Voldby, Hasman, Henrik, Aarestrup, Frank Møller, Lund, Ole

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WGS-based surveillance of third-generation cephalosporin-resistant Escherichia coli from bloodstream infections in Denmark von Roer, Louise, Hansen, Frank, Thomsen, Martin Christen Frølund, Knudsen, Jenny Dahl, Hansen, Dennis Schrøder, Wang, Mikala, Samulioniené, Jurgita, Justesen, Ulrik Stenz, Røder, Bent L, Schumacher, Helga, Østergaard, Claus, Andersen, Leif Percival, Dzajic, Esad, Søndergaard, Turid Snekloth, Stegger, Marc, Hammerum, Anette M, Hasman, Henrik

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MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads von Petersen, Thomas Nordahl, Lukjancenko, Oksana, Thomsen, Martin Christen Frølund, Maddalena Sperotto, Maria, Lund, Ole, Møller Aarestrup, Frank, Sicheritz-Pontén, Thomas

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snpTree--a web-server to identify and construct SNP trees from whole genome sequence data von Leekitcharoenphon, Pimlapas, Kaas, Rolf S, Thomsen, Martin Christen Frølund, Friis, Carsten, Rasmussen, Simon, Aarestrup, Frank M

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Correction: MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads von Petersen, Thomas Nordahl, Lukjancenko, Oksana, Thomsen, Martin Christen Frølund, Maddalena Sperotto, Maria, Lund, Ole, Møller Aarestrup, Frank, Sicheritz-Pontén, Thomas

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PanFunPro: PAN-genome analysis based on FUNctional PROfiles [version 1; peer review: 3 approved with reservations] von Lukjancenko, Oksana, Thomsen, Martin Christen, Voldby Larsen, Mette, Ussery, David Wayne

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The multidisciplinary approach to eosinophilia von Thomsen, Gunhild Nynke, Christoffersen, Mette Niemann, Lindegaard, Hanne Merete, Davidsen, Jesper Rømhild, Hartmeyer, Gitte Nyvang, Assing, Kristian, Mortz, Charlotte G, Martin-Iguacel, Raquel, Møller, Michael Boe, Kjeldsen, Anette Drøhse, Havelund, Troels, El Fassi, Daniel, Broesby-Olsen, Sigurd, Maiborg, Michael, Johansson, Sofie Lock, Andersen, Christen Lykkegaard, Vestergaard, Hanne, Bjerrum, Ole Weis

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A retrospective cohort study of patients with eosinophilia referred to a tertiary centre von Hougaard, Mette, Thomsen, Gundhild Nynke, Kristensen, Thomas Kielsgaard, Lindegaard, Hanne Merete, Davidsen, Jesper Rømhild, Hartmeyer, Gitte Nyvang, Kjeldsen, Anette Drøhse, Martin-Iguacel, Raquel, Maiborg, Michael, Assing, Kristian, Andersen, Christen Lykkegaard, Broesby-Olsen, Sigurd, Møller, Michael Boe, Vestergaard, Hanne, Bjerrum, Ole Weis

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