Capturing the essence of folding and functions of biomolecules using coarse-grained models von Hyeon, Changbong, Thirumalai, D.

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A maximum-entropy model to predict 3D structural ensembles of chromatin from pairwise distances with applications to interphase chromosomes and structural variants von Shi, Guang, Thirumalai, D.

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Conformational heterogeneity in human interphase chromosome organization reconciles the FISH and Hi-C paradox von Shi, Guang, Thirumalai, D.

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Interphase human chromosome exhibits out of equilibrium glassy dynamics von Shi, Guang, Liu, Lei, Hyeon, Changbong, Thirumalai, D.

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Watching ion-driven kinetics of ribozyme folding and misfolding caused by energetic and topological frustration one molecule at a time von Hori, Naoto, Thirumalai, D

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From Hi-C Contact Map to Three-Dimensional Organization of Interphase Human Chromosomes von Shi, Guang, Thirumalai, D.

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Colloquium : Random first order transition theory concepts in biology and physics von Kirkpatrick, T. R., Thirumalai, D.

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Protein folding guides disulfide bond formation von Qin, Meng, Wang, Wei, Thirumalai, D.

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Theoretical perspectives on biological machines von Mugnai, Mauro L., Hyeon, Changbong, Hinczewski, Michael, Thirumalai, D.

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Urea denaturation by stronger dispersion interactions with proteins than water implies a 2-stage unfolding von Hua, Lan, Zhou, Ruhong, Thirumalai, D, Berne, B.J

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Role of Water in Protein Aggregation and Amyloid Polymorphism von Thirumalai, D, Reddy, Govardhan, Straub, John E

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A mathematical model for phenotypic heterogeneity in breast cancer with implications for therapeutic strategies von Li, Xin, Thirumalai, D

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Symmetry, Rigidity, and Allosteric Signaling: From Monomeric Proteins to Molecular Machines von Thirumalai, D, Hyeon, Changbong, Zhuravlev, Pavel I, Lorimer, George H

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Residue-Dependent Transition Temperatures and Denaturant Midpoints in the Folding of a Multidomain Protein von Liu, Zhenxing, Thirumalai, D.

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Toward a molecular theory of early and late events in monomer to amyloid fibril formation von Straub, John E, Thirumalai, D

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Asymmetry in histone rotation in forced unwrapping and force quench rewrapping in a nucleosome von Reddy, Govardhan, Thirumalai, D

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Theory and simulations for RNA folding in mixtures of monovalent and divalent cations von Nguyen, Hung T., Hori, Naoto, Thirumalai, D.

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Step-Wise Hydration of Magnesium by Four Water Molecules Precedes Phosphate Release in a Myosin Motor von Mugnai, Mauro Lorenzo, Thirumalai, D

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Chain organization of human interphase chromosome determines the spatiotemporal dynamics of chromatin loci von Liu, Lei, Shi, Guang, Thirumalai, D, Hyeon, Changbong

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Scaling regimes for wormlike chains confined to cylindrical surfaces under tension von Morrison, Greg, Thirumalai, D.

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