The genomic landscape of malignant peripheral nerve sheath tumors: diverse drivers of Ras pathway activation von Brohl, Andrew S., Kahen, Elliot, Yoder, Sean J., Teer, Jamie K., Reed, Damon R.

Volltext

Tumor-infiltrating lymphocyte treatment for anti-PD-1-resistant metastatic lung cancer: a phase 1 trial von Creelan, Benjamin C., Wang, Chao, Teer, Jamie K., Toloza, Eric M., Yao, Jiqiang, Kim, Sungjune, Landin, Ana M., Mullinax, John E., Saller, James J., Saltos, Andreas N., Noyes, David R., Montoya, Leighann B., Curry, Wesley, Pilon-Thomas, Shari A., Chiappori, Alberto A., Tanvetyanon, Tawee, Kaye, Frederic J., Thompson, Zachary J., Yoder, Sean J., Fang, Bin, Koomen, John M., Sarnaik, Amod A., Chen, Dung-Tsa, Conejo-Garcia, Jose R., Haura, Eric B., Antonia, Scott J.

Volltext

Secondary Variants in Individuals Undergoing Exome Sequencing: Screening of 572 Individuals Identifies High-Penetrance Mutations in Cancer-Susceptibility Genes von Johnston, Jennifer J., Rubinstein, Wendy S., Facio, Flavia M., Ng, David, Singh, Larry N., Teer, Jamie K., Mullikin, James C., Biesecker, Leslie G.

Volltext

Exome sequencing: the sweet spot before whole genomes von Teer, Jamie K., Mullikin, James C.

Volltext

Co-evolution of somatic variation in primary and metastatic colorectal cancer may expand biopsy indications in the molecular era von Kim, Richard, Schell, Michael J, Teer, Jamie K, Greenawalt, Danielle M, Yang, Mingli, Yeatman, Timothy J

Volltext

An Interactive Resource to Probe Genetic Diversity and Estimated Ancestry in Cancer Cell Lines von Dutil, Julie, Chen, Zhihua, Monteiro, Alvaro N, Teer, Jamie K, Eschrich, Steven A

Volltext

Mining exomic sequencing data to identify mutated antigens recognized by adoptively transferred tumor-reactive T cells von Robbins, Paul F, Lu, Yong-Chen, El-Gamil, Mona, Li, Yong F, Gross, Colin, Gartner, Jared, Lin, Jimmy C, Teer, Jamie K, Cliften, Paul, Tycksen, Eric, Samuels, Yardena, Rosenberg, Steven A

Volltext

Fast all versus all genotype comparison using DNA/RNA sequencing data: method and workflow von Eschrich, Steven A, Yu, Xiaoqing, Teer, Jamie K

Volltext

A multigene mutation classification of 468 colorectal cancers reveals a prognostic role for APC von Schell, Michael J., Yang, Mingli, Teer, Jamie K., Lo, Fang Yin, Madan, Anup, Coppola, Domenico, Monteiro, Alvaro N. A., Nebozhyn, Michael V., Yue, Binglin, Loboda, Andrey, Bien-Willner, Gabriel A., Greenawalt, Danielle M., Yeatman, Timothy J.

Volltext

The Phenotype of a Germline Mutation in PIGA: The Gene Somatically Mutated in Paroxysmal Nocturnal Hemoglobinuria von Johnston, Jennifer J., Gropman, Andrea L., Sapp, Julie C., Teer, Jamie K., Martin, Jodie M., Liu, Cyndi F., Yuan, Xuan, Ye, Zhaohui, Cheng, Linzhao, Brodsky, Robert A., Biesecker, Leslie G.

Volltext

The genomic landscape of undifferentiated embryonal sarcoma of the liver is typified by C19MC structural rearrangement and overexpression combined with TP53 mutation or loss von Setty, Bhuvana A., Jinesh, Goodwin G., Arnold, Michael, Pettersson, Fredrik, Cheng, Chia-Ho, Cen, Ling, Yoder, Sean J., Teer, Jamie K., Flores, Elsa R., Reed, Damon R., Brohl, Andrew S.

Volltext

Whole-exome sequencing identifies homozygous AFG3L2 mutations in a spastic ataxia-neuropathy syndrome linked to mitochondrial m-AAA proteases von Pierson, Tyler Mark, Adams, David, Bonn, Florian, Martinelli, Paola, Cherukuri, Praveen F, Teer, Jamie K, Hansen, Nancy F, Cruz, Pedro, Mullikin For The Nisc Comparative Sequencing Program, James C, Blakesley, Robert W, Golas, Gretchen, Kwan, Justin, Sandler, Anthony, Fuentes Fajardo, Karin, Markello, Thomas, Tifft, Cynthia, Blackstone, Craig, Rugarli, Elena I, Langer, Thomas, Gahl, William A, Toro, Camilo

Volltext

Single-cell Characterization of the Cellular Landscape of Acral Melanoma Identifies Novel Targets for Immunotherapy von Li, Jiannong, Smalley, Inna, Chen, Zhihua, Wu, Jheng-Yu, Phadke, Manali S, Teer, Jamie K, Nguyen, Thanh, Karreth, Florian A, Koomen, John M, Sarnaik, Amod A, Zager, Jonathan S, Khushalani, Nikhil I, Tarhini, Ahmad A, Sondak, Vernon K, Rodriguez, Paulo C, Messina, Jane L, Chen, Y Ann, Smalley, Keiran S M

Volltext

Effects of Tobacco Smoking on the Tumor Immune Microenvironment in Head and Neck Squamous Cell Carcinoma von de la Iglesia, Janis V., Slebos, Robbert J. C., Martin-Gomez, Laura, Wang, Xuefeng, Teer, Jamie K., Tan, Aik Choon, Gerke, Travis A., Aden-Buie, Garrick, van Veen, Tessa, Masannat, Jude, Chaudhary, Ritu, Song, Feifei, Fournier, Michelle, Siegel, Erin M., Schabath, Matthew B., Wadsworth, J. Trad, Caudell, Jimmy, Harrison, Louis, Wenig, Bruce M., Conejo-Garcia, Jose, Hernandez-Prera, Juan C., Chung, Christine H.

Volltext

VarSifter: Visualizing and analyzing exome-scale sequence variation data on a desktop computer von Teer, Jamie K., Green, Eric D., Mullikin, James C., Biesecker, Leslie G.

Volltext

Use of HLA peptidomics and whole exome sequencing to identify human immunogenic neo-antigens von Kalaora, Shelly, Barnea, Eilon, Merhavi-Shoham, Efrat, Qutob, Nouar, Teer, Jamie K, Shimony, Nilly, Schachter, Jacob, Rosenberg, Steven A, Besser, Michal J, Admon, Arie, Samuels, Yardena

Volltext

Proteogenomic landscape of squamous cell lung cancer von Stewart, Paul A., Welsh, Eric A., Slebos, Robbert J. C., Fang, Bin, Izumi, Victoria, Chambers, Matthew, Zhang, Guolin, Cen, Ling, Pettersson, Fredrik, Zhang, Yonghong, Chen, Zhihua, Cheng, Chia-Ho, Thapa, Ram, Thompson, Zachary, Fellows, Katherine M., Francis, Jewel M., Saller, James J., Mesa, Tania, Zhang, Chaomei, Yoder, Sean, DeNicola, Gina M., Beg, Amer A., Boyle, Theresa A., Teer, Jamie K., Ann Chen, Yian, Koomen, John M., Eschrich, Steven A., Haura, Eric B.

Volltext

Exome sequencing identifies GRIN2A as frequently mutated in melanoma von Wei, Xiaomu, Walia, Vijay, Lin, Jimmy C, Teer, Jamie K, Prickett, Todd D, Gartner, Jared, Davis, Sean, Stemke-Hale, Katherine, Davies, Michael A, Gershenwald, Jeffrey E, Robinson, William, Robinson, Steven, Rosenberg, Steven A, Samuels, Yardena

Volltext

Translational pathology, genomics and the development of systemic therapies for acral melanoma von Chen, Yian Ann, Teer, Jamie K., Eroglu, Zeynep, Wu, Jheng-Yu, Koomen, John M., Karreth, Florian A., Messina, Jane L., Smalley, Keiran S.M.

Volltext

A Mosaic Activating Mutation in AKT1 Associated with the Proteus Syndrome von Lindhurst, Marjorie J, Sapp, Julie C, Teer, Jamie K, Johnston, Jennifer J, Finn, Erin M, Peters, Kathryn, Turner, Joyce, Cannons, Jennifer L, Bick, David, Blakemore, Laurel, Blumhorst, Catherine, Brockmann, Knut, Calder, Peter, Cherman, Natasha, Deardorff, Matthew A, Everman, David B, Golas, Gretchen, Greenstein, Robert M, Kato, B. Maya, Keppler-Noreuil, Kim M, Kuznetsov, Sergei A, Miyamoto, Richard T, Newman, Kurt, Ng, David, O'Brien, Kevin, Rothenberg, Steven, Schwartzentruber, Douglas J, Singhal, Virender, Tirabosco, Roberto, Upton, Joseph, Wientroub, Shlomo, Zackai, Elaine H, Hoag, Kimberly, Whitewood-Neal, Tracey, Robey, Pamela G, Schwartzberg, Pamela L, Darling, Thomas N, Tosi, Laura L, Mullikin, James C, Biesecker, Leslie G

Volltext