Identification of cancer driver genes based on nucleotide context von Dietlein, Felix, Weghorn, Donate, Taylor-Weiner, Amaro, Richters, André, Reardon, Brendan, Liu, David, Lander, Eric S., Van Allen, Eliezer M., Sunyaev, Shamil R.

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Sporadic Early-onset Diffuse Gastric Cancers Have High Frequency of Somatic CDH1 Alterations but Low Frequency of Somatic RHOA Mutations Compared with Late-onset Cancers von Cho, Soo Young, Park, Jun Won, Liu, Yang, Park, Young Soo, Kim, Ju Hee, Yang, Hanna, Um, Hyejin, Ko, Woo Ri, Lee, Byung Il, Kwon, Sun Young, Ryu, Seung Wan, Kwon, Chae Hwa, Park, Do Youn, Lee, Jae-Hyuk, Lee, Sang Il, Song, Kyu Sang, Hur, Hoon, Han, Sang-Uk, Chang, Heekyung, Kim, Su-Jin, Kim, Byung-Sik, Yook, Jeong-Hwan, Yoo, Moon-Won, Kim, Beom-Su, Lee, In-Seob, Kook, Myeong-Cherl, Thiessen, Nina, He, An, Stewart, Chip, Dunford, Andrew, Kim, Jaegil, Shih, Juliann, Saksena, Gordon, Cherniack, Andrew D, Schumacher, Steven, Weiner, Amaro-Taylor, Rosenberg, Mara, Getz, Gad, Yang, Eun Gyeong, Ryu, Min Hee, Bass, Adam J, Kim, Hark Kyun

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Traumatic Brain Injury Increases Cortical Glutamate Network Activity by Compromising GABAergic Control von Cantu, David, Walker, Kendall, Andresen, Lauren, Taylor-Weiner, Amaro, Hampton, David, Tesco, Giuseppina, Dulla, Chris G

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Scaling computational genomics to millions of individuals with GPUs von Taylor-Weiner, Amaro, Aguet, François, Haradhvala, Nicholas J, Gosai, Sager, Anand, Shankara, Kim, Jaegil, Ardlie, Kristin, Van Allen, Eliezer M, Getz, Gad

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Gabapentin attenuates hyperexcitability in the freeze-lesion model of developmental cortical malformation von Andresen, Lauren, Hampton, David, Taylor-Weiner, Amaro, Morel, Lydie, Yang, Yongjie, Maguire, Jamie, Dulla, Chris G

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Human-interpretable image features derived from densely mapped cancer pathology slides predict diverse molecular phenotypes von Diao, James A., Wang, Jason K., Chui, Wan Fung, Mountain, Victoria, Gullapally, Sai Chowdary, Srinivasan, Ramprakash, Mitchell, Richard N., Glass, Benjamin, Hoffman, Sara, Rao, Sudha K., Maheshwari, Chirag, Lahiri, Abhik, Prakash, Aaditya, McLoughlin, Ryan, Kerner, Jennifer K., Resnick, Murray B., Montalto, Michael C., Khosla, Aditya, Wapinski, Ilan N., Beck, Andrew H., Elliott, Hunter L., Taylor-Weiner, Amaro

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Clonal evolution in patients with chronic lymphocytic leukaemia developing resistance to BTK inhibition von Burger, Jan A., Landau, Dan A., Taylor-Weiner, Amaro, Bozic, Ivana, Zhang, Huidan, Sarosiek, Kristopher, Wang, Lili, Stewart, Chip, Fan, Jean, Hoellenriegel, Julia, Sivina, Mariela, Dubuc, Adrian M., Fraser, Cameron, Han, Yulong, Li, Shuqiang, Livak, Kenneth J., Zou, Lihua, Wan, Youzhong, Konoplev, Sergej, Sougnez, Carrie, Brown, Jennifer R., Abruzzo, Lynne V., Carter, Scott L., Keating, Michael J., Davids, Matthew S., Wierda, William G., Cibulskis, Kristian, Zenz, Thorsten, Werner, Lillian, Cin, Paola Dal, Kharchencko, Peter, Neuberg, Donna, Kantarjian, Hagop, Lander, Eric, Gabriel, Stacey, O’Brien, Susan, Letai, Anthony, Weitz, David A., Nowak, Martin A., Getz, Gad, Wu, Catherine J.

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Astroglial FMRP-dependent translational down-regulation of mGluR5 underlies glutamate transporter GLT1 dysregulation in the fragile X mouse von Higashimori, Haruki, Morel, Lydie, Huth, James, Lindemann, Lothar, Dulla, Chris, Taylor, Amaro, Freeman, Mike, Yang, Yongjie

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Subclonal mutations in SETBP1 confer a poor prognosis in juvenile myelomonocytic leukemia von Stieglitz, Elliot, Troup, Camille B., Gelston, Laura C., Haliburton, John, Chow, Eric D., Yu, Kristie B., Akutagawa, Jon, Taylor-Weiner, Amaro N., Liu, Y. Lucy, Wang, Yong-Dong, Beckman, Kyle, Emanuel, Peter D., Braun, Benjamin S., Abate, Adam, Gerbing, Robert B., Alonzo, Todd A., Loh, Mignon L.

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Paired exome analysis of Barrett's esophagus and adenocarcinoma von Stachler, Matthew D, Taylor-Weiner, Amaro, Peng, Shouyong, McKenna, Aaron, Agoston, Agoston T, Odze, Robert D, Davison, Jon M, Nason, Katie S, Loda, Massimo, Leshchiner, Ignaty, Stewart, Chip, Stojanov, Petar, Seepo, Sara, Lawrence, Michael S, Ferrer-Torres, Daysha, Lin, Jules, Chang, Andrew C, Gabriel, Stacey B, Lander, Eric S, Beer, David G, Getz, Gad, Carter, Scott L, Bass, Adam J

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Response and Acquired Resistance to Everolimus in Anaplastic Thyroid Cancer von Wagle, Nikhil, Grabiner, Brian C, Van Allen, Eliezer M, Amin-Mansour, Ali, Taylor-Weiner, Amaro, Rosenberg, Mara, Gray, Nathanael, Barletta, Justine A, Guo, Yanan, Swanson, Scott J, Ruan, Daniel T, Hanna, Glenn J, Haddad, Robert I, Getz, Gad, Kwiatkowski, David J, Carter, Scott L, Sabatini, David M, Jänne, Pasi A, Garraway, Levi A, Lorch, Jochen H

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Genetic and Clonal Dissection of Murine Small Cell Lung Carcinoma Progression by Genome Sequencing von McFadden, David G., Papagiannakopoulos, Thales, Taylor-Weiner, Amaro, Stewart, Chip, Carter, Scott L., Cibulskis, Kristian, Bhutkar, Arjun, McKenna, Aaron, Dooley, Alison, Vernon, Amanda, Sougnez, Carrie, Malstrom, Scott, Heimann, Megan, Park, Jennifer, Chen, Frances, Farago, Anna F., Dayton, Talya, Shefler, Erica, Gabriel, Stacey, Getz, Gad, Jacks, Tyler

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Dramatic Response of BRAF V600E Mutant Papillary Craniopharyngioma to Targeted Therapy von Brastianos, Priscilla K, Shankar, Ganesh M, Gill, Corey M, Taylor-Weiner, Amaro, Nayyar, Naema, Panka, David J, Sullivan, Ryan J, Frederick, Dennie T, Abedalthagafi, Malak, Jones, Pamela S, Dunn, Ian F, Nahed, Brian V, Romero, Javier M, Louis, David N, Getz, Gad, Cahill, Daniel P, Santagata, Sandro, Curry, Jr, William T, Barker, 2nd, Fred G

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DeTiN: overcoming tumor-in-normal contamination von Taylor-Weiner, Amaro, Stewart, Chip, Giordano, Thomas, Miller, Mendy, Rosenberg, Mara, Macbeth, Alyssa, Lennon, Niall, Rheinbay, Esther, Landau, Dan-Avi, Wu, Catherine J., Getz, Gad

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Mutational patterns in chemotherapy resistant muscle-invasive bladder cancer von Liu, David, Abbosh, Philip, Keliher, Daniel, Reardon, Brendan, Miao, Diana, Mouw, Kent, Weiner-Taylor, Amaro, Wankowicz, Stephanie, Han, Garam, Teo, Min Yuen, Cipolla, Catharine, Kim, Jaegil, Iyer, Gopa, Al-Ahmadie, Hikmat, Dulaimi, Essel, Chen, David Y. T., Alpaugh, R. Katherine, Hoffman-Censits, Jean, Garraway, Levi A., Getz, Gad, Carter, Scott L., Bellmunt, Joaquim, Plimack, Elizabeth R., Rosenberg, Jonathan E., Van Allen, Eliezer M.

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The impact of tumor profiling approaches and genomic data strategies for cancer precision medicine von Garofalo, Andrea, Sholl, Lynette, Reardon, Brendan, Taylor-Weiner, Amaro, Amin-Mansour, Ali, Miao, Diana, Liu, David, Oliver, Nelly, MacConaill, Laura, Ducar, Matthew, Rojas-Rudilla, Vanesa, Giannakis, Marios, Ghazani, Arezou, Gray, Stacy, Janne, Pasi, Garber, Judy, Joffe, Steve, Lindeman, Neal, Wagle, Nikhil, Garraway, Levi A, Van Allen, Eliezer M

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Mutations driving CLL and their evolution in progression and relapse von Landau, Dan A., Tausch, Eugen, Taylor-Weiner, Amaro N., Stewart, Chip, Reiter, Johannes G., Bahlo, Jasmin, Kluth, Sandra, Bozic, Ivana, Lawrence, Mike, Böttcher, Sebastian, Carter, Scott L., Cibulskis, Kristian, Mertens, Daniel, Sougnez, Carrie L., Rosenberg, Mara, Hess, Julian M., Edelmann, Jennifer, Kless, Sabrina, Kneba, Michael, Ritgen, Matthias, Fink, Anna, Fischer, Kirsten, Gabriel, Stacey, Lander, Eric S., Nowak, Martin A., Döhner, Hartmut, Hallek, Michael, Neuberg, Donna, Getz, Gad, Stilgenbauer, Stephan, Wu, Catherine J.

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Molecular profiling of endometrial carcinoma precursor, primary and metastatic lesions suggests different targets for treatment in obese compared to non-obese patients von Berg, Anna, Hoivik, Erling A, Mjøs, Siv, Holst, Frederik, Werner, Henrica M J, Tangen, Ingvild L, Taylor-Weiner, Amaro, Gibson, William J, Kusonmano, Kanthida, Wik, Elisabeth, Trovik, Jone, Halle, Mari K, Øyan, Anne M, Kalland, Karl-Henning, Cherniack, Andrew D, Beroukhim, Rameen, Stefansson, Ingunn, Mills, Gordon B, Krakstad, Camilla, Salvesen, Helga B

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Framing attention in Japanese and american comics: cross-cultural differences in attentional structure von Cohn, Neil, Taylor-Weiner, Amaro, Grossman, Suzanne

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AI powered quantification of nuclear morphology in cancers enables prediction of genome instability and prognosis von Abel, John, Jain, Suyog, Rajan, Deepta, Padigela, Harshith, Leidal, Kenneth, Prakash, Aaditya, Conway, Jake, Nercessian, Michael, Kirkup, Christian, Javed, Syed Ashar, Biju, Raymond, Harguindeguy, Natalia, Shenker, Daniel, Indorf, Nicholas, Sanghavi, Darpan, Egger, Robert, Trotter, Benjamin, Gerardin, Ylaine, Brosnan-Cashman, Jacqueline A., Dhoot, Aditya, Montalto, Michael C., Parmar, Chintan, Wapinski, Ilan, Khosla, Archit, Drage, Michael G., Yu, Limin, Taylor-Weiner, Amaro

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