ITSoneWB: profiling global taxonomic diversity of eukaryotic communities on Galaxy von Tangaro, Marco A, Defazio, Giuseppe, Fosso, Bruno, Licciulli, Vito Flavio, Grillo, Giorgio, Donvito, Giacinto, Lavezzo, Enrico, Baruzzo, Giacomo, Pesole, Graziano, Santamaria, Monica

Volltext

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update von Afgan, Enis, Nekrutenko, Anton, Grüning, Bjórn A, Blankenberg, Daniel, Goecks, Jeremy, Schatz, Michael C, Ostrovsky, Alexander E, Mahmoud, Alexandru, Lonie, Andrew J, Syme, Anna, Fouilloux, Anne, Bretaudeau, Anthony, Kumar, Anup, Eschenlauer, Arthur C, DeSanto, Assunta D, Guerler, Aysam, Serrano-Solano, Beatriz, Batut, Bérénice, Grüning, Björn A, Langhorst, Bradley W, Carr, Bridget, Raubenolt, Bryan A, Hyde, Cameron J, Bromhead, Catherine J, Barnett, Christopher B, Royaux, Coline, Gallardo, Cristóbal, Fornika, Daniel J, Baker, Dannon, Bouvier, Dave, Clements, Dave, de Lima Morais, David A, Tabernero, David Lopez, Lariviere, Delphine, Nasr, Engy, Zambelli, Federico, Heyl, Florian, Psomopoulos, Fotis, Coppens, Frederik, Price, Gareth R, Cuccuru, Gianmauro, Corguillé, Gildas Le, Von Kuster, Greg, Akbulut, Gulsum Gudukbay, Rasche, Helena, Hotz, Hans-Rudolf, Eguinoa, Ignacio, Makunin, Igor, Ranawaka, Isuru J, Taylor, James P, Joshi, Jayadev, Hillman-Jackson, Jennifer, Chilton, John M, Kamali, Kaivan, Suderman, Keith, Poterlowicz, Krzysztof, Yvan, Le Bras, Lopez-Delisle, Lucille, Sargent, Luke, Bassetti, Madeline E, Tangaro, Marco Antonio, van den Beek, Marius, Čech, Martin, Bernt, Matthias, Fahrner, Matthias, Tekman, Mehmet, Föll, Melanie C, Crusoe, Michael R, Roncoroni, Miguel, Kucher, Natalie, Coraor, Nate, Stoler, Nicholas, Rhodes, Nick, Soranzo, Nicola, Pinter, Niko, Goonasekera, Nuwan A, Moreno, Pablo A, Videm, Pavankumar, Melanie, Petera, Mandreoli, Pietro, Jagtap, Pratik D, Gu, Qiang, Weber, Ralf J M, Lazarus, Ross, Vorderman, Ruben H P, Hiltemann, Saskia, Golitsynskiy, Sergey, Garg, Shilpa, Bray, Simon A, Gladman, Simon L, Leo, Simone, Mehta, Subina P, Griffin, Timothy J, Jalili, Vahid, Yves, Vandenbrouck, Wen, Victor, Nagampalli, Vijay K, Bacon, Wendi A, de Koning, Willem, Maier, Wolfgang

Volltext

DOME: recommendations for supervised machine learning validation in biology von Walsh, Ian, Fishman, Dmytro, Garcia-Gasulla, Dario, Titma, Tiina, Pollastri, Gianluca, Harrow, Jennifer, Psomopoulos, Fotis E., Tosatto, Silvio C. E.

Volltext

Territorial bias in university rankings: a complex network approach von Bellantuono, Loredana, Monaco, Alfonso, Amoroso, Nicola, Aquaro, Vincenzo, Bardoscia, Marco, Loiotile, Annamaria Demarinis, Lombardi, Angela, Tangaro, Sabina, Bellotti, Roberto

Volltext

UTRdb 2.0: a comprehensive, expert curated catalog of eukaryotic mRNAs untranslated regions von Lo Giudice, Claudio, Zambelli, Federico, Chiara, Matteo, Pavesi, Giulio, Tangaro, Marco Antonio, Picardi, Ernesto, Pesole, Graziano

Volltext

ELIXIR-IT HPC@CINECA: high performance computing resources for the bioinformatics community von Castrignanò, Tiziana, Gioiosa, Silvia, Flati, Tiziano, Cestari, Mirko, Picardi, Ernesto, Chiara, Matteo, Fratelli, Maddalena, Amente, Stefano, Cirilli, Marco, Tangaro, Marco Antonio, Chillemi, Giovanni, Pesole, Graziano, Zambelli, Federico

Volltext

Investigating RNA editing in deep transcriptome datasets with REDItools and REDIportal von Lo Giudice, Claudio, Tangaro, Marco Antonio, Pesole, Graziano, Picardi, Ernesto

Volltext

REDIportal: millions of novel A-to-I RNA editing events from thousands of RNAseq experiments von Mansi, Luigi, Tangaro, Marco Antonio, Lo Giudice, Claudio, Flati, Tiziano, Kopel, Eli, Schaffer, Amos Avraham, Castrignanò, Tiziana, Chillemi, Giovanni, Pesole, Graziano, Picardi, Ernesto

Volltext

A machine learning approach on multiscale texture analysis for breast microcalcification diagnosis von Fanizzi, Annarita, Basile, Teresa M A, Losurdo, Liliana, Bellotti, Roberto, Bottigli, Ubaldo, Dentamaro, Rosalba, Didonna, Vittorio, Fausto, Alfonso, Massafra, Raffaella, Moschetta, Marco, Popescu, Ondina, Tamborra, Pasquale, Tangaro, Sabina, La Forgia, Daniele

Volltext

Dynamic configuration and data security for bioinformatics cloud services with the Laniakea Dashboard von Tangaro, Marco Antonio, Antonacci, Marica, Donvito, Giacinto, Foggetti, Nadina, Mandreoli, Pietro, Colombo, Daniele, Pesole, Graziano, Zambelli, Federico

Volltext

Radiomic Analysis in Contrast-Enhanced Spectral Mammography for Predicting Breast Cancer Histological Outcome von La Forgia, Daniele, Fanizzi, Annarita, Campobasso, Francesco, Bellotti, Roberto, Didonna, Vittorio, Lorusso, Vito, Moschetta, Marco, Massafra, Raffaella, Tamborra, Pasquale, Tangaro, Sabina, Telegrafo, Michele, Pastena, Maria Irene, Zito, Alfredo

Volltext

aScan: A Novel Method for the Study of Allele Specific Expression in Single Individuals von Zambelli, Federico, Chiara, Matteo, Ferrandi, Erika, Mandreoli, Pietro, Tangaro, Marco Antonio, Pavesi, Giulio, Pesole, Graziano

Volltext

A complex network approach reveals a pivotal substructure of genes linked to schizophrenia von Monaco, Alfonso, Monda, Anna, Amoroso, Nicola, Bertolino, Alessandro, Blasi, Giuseppe, Di Carlo, Pasquale, Papalino, Marco, Pergola, Giulio, Tangaro, Sabina, Bellotti, Roberto

Volltext

Validity of Machine Learning in Predicting Giant Cell Arteritis Flare After Glucocorticoids Tapering von Venerito, Vincenzo, Emmi, Giacomo, Cantarini, Luca, Leccese, Pietro, Fornaro, Marco, Fabiani, Claudia, Lascaro, Nancy, Coladonato, Laura, Mattioli, Irene, Righetti, Giulia, Malandrino, Danilo, Tangaro, Sabina, Palermo, Adalgisa, Urban, Maria Letizia, Conticini, Edoardo, Frediani, Bruno, Iannone, Florenzo, Lopalco, Giuseppe

Volltext

Laniakea@ReCaS: exploring the potential of customisable Galaxy on-demand instances as a cloud-based service von Tangaro, Marco Antonio, Mandreoli, Pietro, Chiara, Matteo, Donvito, Giacinto, Antonacci, Marica, Parisi, Antonio, Bianco, Angelica, Romano, Angelo, Bianchi, Daniela Manila, Cangelosi, Davide, Uva, Paolo, Molineris, Ivan, Nosi, Vladimir, Calogero, Raffaele A, Alessandri, Luca, Pedrini, Elena, Mordenti, Marina, Bonetti, Emanuele, Sangiorgi, Luca, Pesole, Graziano, Zambelli, Federico

Volltext

Developing an ensemble machine learning study: Insights from a multi-center proof-of-concept study von Fanizzi, Annarita, Fadda, Federico, Maddalo, Michele, Saponaro, Sara, Lorenzon, Leda, Ubaldi, Leonardo, Lambri, Nicola, Giuliano, Alessia, Loi, Emiliano, Signoriello, Michele, Branchini, Marco, Belmonte, Gina, Giannelli, Marco, Mancosu, Pietro, Talamonti, Cinzia, Iori, Mauro, Tangaro, Sabina, Avanzo, Michele, Massafra, Raffaella

Volltext

Identified charged hadron production in Pb-Pb collisions with event shape engineering von Tangaro, Marco Antonio

Volltext

CorGAT: a tool for the functional annotation of SARS-CoV-2 genomes von Chiara, Matteo, Zambelli, Federico, Tangaro, Marco Antonio, Mandreoli, Pietro, Horner, David S, Pesole, Graziano

Volltext

INDIGO-DataCloud: a Platform to Facilitate Seamless Access to E-Infrastructures von Salomoni, D., Campos, I., Gaido, L., de Lucas, J. Marco, Solagna, P., Gomes, J., Matyska, L., Fuhrman, P., Hardt, M., Donvito, G., Dutka, L., Plociennik, M., Barbera, R., Blanquer, I., Ceccanti, A., Cetinic, E., David, M., Duma, C., López-García, A., Moltó, G., Orviz, P., Sustr, Z., Viljoen, M., Aguilar, F., Alves, L., Antonacci, M., Antonelli, L. A., Bagnasco, S., Bonvin, A. M. J. J., Bruno, R., Chen, Y., Costa, A., Davidovic, D., Ertl, B., Fargetta, M., Fiore, S., Gallozzi, S., Kurkcuoglu, Z., Lloret, L., Martins, J., Nuzzo, A., Nassisi, P., Palazzo, C., Pina, J., Sciacca, E., Spiga, D., Tangaro, M., Urbaniak, M., Vallero, S., Wegh, B., Zaccolo, V., Zambelli, F., Zok, T.

Volltext

Exploring the Oral Microbiome in Rheumatic Diseases, State of Art and Future Prospective in Personalized Medicine with an AI Approach von Bellando-Randone, Silvia, Russo, Edda, Venerito, Vincenzo, Matucci-Cerinic, Marco, Iannone, Florenzo, Tangaro, Sabina, Amedei, Amedeo

Volltext