systemPipeR: NGS workflow and report generation environment von H Backman, Tyler W, Girke, Thomas

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ClusterCAD: a computational platform for type I modular polyketide synthase design von Eng, Clara H, Backman, Tyler W H, Bailey, Constance B, Magnan, Christophe, García Martín, Héctor, Katz, Leonard, Baldi, Pierre, Keasling, Jay D

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ChemMine tools: an online service for analyzing and clustering small molecules von Backman, Tyler W. H., Cao, Yiqun, Girke, Thomas

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BayFlux: A Bayesian method to quantify metabolic Fluxes and their uncertainty at the genome scale von Backman, Tyler W. H, Schenk, Christina, Radivojevic, Tijana, Ando, David, Singh, Jahnavi, Czajka, Jeffrey J, Costello, Zak, Keasling, Jay D, Tang, Yinjie, Akhmatskaya, Elena, Garcia Martin, Hector

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ClusterCAD 2.0: an updated computational platform for chimeric type I polyketide synthase and nonribosomal peptide synthetase design von Tao, Xavier B, LaFrance, Sarah, Xing, Yifei, Nava, Alberto A, Martin, Hector Garcia, Keasling, Jay D, Backman, Tyler W H

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Juvenile hormone and its receptor, methoprene-tolerant, control the dynamics of mosquito gene expression von Zou, Zhen, Saha, Tusar T, Roy, Sourav, Shin, Sang Woon, Backman, Tyler W H, Girke, Thomas, White, Kevin P, Raikhel, Alexander S

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fmcsR: mismatch tolerant maximum common substructure searching in R von Wang, Yan, Backman, Tyler W H, Horan, Kevin, Girke, Thomas

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The Experiment Data Depot: A Web-Based Software Tool for Biological Experimental Data Storage, Sharing, and Visualization von Morrell, William C, Birkel, Garrett W, Forrer, Mark, Lopez, Teresa, Backman, Tyler W. H, Dussault, Michael, Petzold, Christopher J, Baidoo, Edward E. K, Costello, Zak, Ando, David, Alonso-Gutierrez, Jorge, George, Kevin W, Mukhopadhyay, Aindrila, Vaino, Ian, Keasling, Jay D, Adams, Paul D, Hillson, Nathan J, Garcia Martin, Hector

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The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism von Birkel, Garrett W, Ghosh, Amit, Kumar, Vinay S, Weaver, Daniel, Ando, David, Backman, Tyler W H, Arkin, Adam P, Keasling, Jay D, Martín, Héctor García

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Erratum to: The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism von Birkel, Garrett W, Ghosh, Amit, Kumar, Vinay S, Weaver, Daniel, Ando, David, Backman, Tyler W H, Arkin, Adam P, Keasling, Jay D, Martín, Héctor García

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Update of ASRP: the Arabidopsis Small RNA Project database von Backman, Tyler W.H, Sullivan, Christopher M, Cumbie, Jason S, Miller, Zachary A, Chapman, Elisabeth J, Fahlgren, Noah, Givan, Scott A, Carrington, James C, Kasschau, Kristin D

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Synthetic biology of polyketide synthases von Yuzawa, Satoshi, Backman, Tyler W. H., Keasling, Jay D., Katz, Leonard

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Constraining Genome-Scale Models to Represent the Bow Tie Structure of Metabolism for 13C Metabolic Flux Analysis von Backman, Tyler, Ando, David, Singh, Jahnavi, Keasling, Jay, García Martín, Héctor

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Structural insights into dehydratase substrate selection for the borrelidin and fluvirucin polyketide synthases von Barajas, Jesus F., McAndrew, Ryan P., Thompson, Mitchell G., Backman, Tyler W. H., Pang, Bo, de Rond, Tristan, Pereira, Jose H., Benites, Veronica T., Martín, Héctor García, Baidoo, Edward E. K., Hillson, Nathan J., Adams, Paul D., Keasling, Jay D.

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Computational and analytical framework for small RNA profiling by high-throughput sequencing von Fahlgren, Noah, Sullivan, Christopher M, Kasschau, Kristin D, Chapman, Elisabeth J, Cumbie, Jason S, Montgomery, Taiowa A, Gilbert, Sunny D, Dasenko, Mark, Backman, Tyler W H, Givan, Scott A, Carrington, James C

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BayFlux: A Bayesian method to quantify metabolic Fluxes and their uncertainty at the genome scale von Backman, Tyler W. H., Schenk, Christina, Radivojevic, Tijana, Ando, David, Singh, Jahnavi, Czajka, Jeffrey J., Costello, Zak, Keasling, Jay D., Tang, Yinjie, Akhmatskaya, Elena, Garcia Martin, Hector, Ouzounis, ed., Christos A.

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Cheminformatic Analysis of High-Throughput Compound Screens von Backman, Tyler W. H., Girke, Thomas

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ClusterCAD: a computational platform for type I modular polyketide synthase design von Eng, Clara H., Backman, Tyler W H, Bailey, Constance B., Magnan, Christophe, Garcia Martin, Hector, Katz, Leonard, Baldi, Pierre, Keasling, Jay D.

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The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism von Birkel, Garrett W., Ghosh, Amit, Kumar, Vinay S., Weaver, Daniel, Ando, David, Backman, Tyler W. H., Arkin, Adam P., Keasling, Jay D., Martín, Héctor García

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Structural insights into dehydratase substrate selection for the borrelidin and fluvirucin polyketide synthases von Barajas, Jesus F., McAndrew, Ryan P., Thompson, Mitchell G., Backman, Tyler W. H., Pang, Bo, de Rond, Tristan, Pereira, Jose H., Benites, Veronica T., Martín, Héctor García, Baidoo, Edward E. K., Hillson, Nathan J., Adams, Paul D., Keasling, Jay D.

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