Enhancing diversity analysis by repeatedly rarefying next generation sequencing data describing microbial communities von Cameron, Ellen S., Schmidt, Philip J., Tremblay, Benjamin J.-M., Emelko, Monica B., Müller, Kirsten M.

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Interplay between coding and non-coding regulation drives the Arabidopsis seed-to-seedling transition von Tremblay, Benjamin J. M., Santini, Cristina P., Cheng, Yajiao, Zhang, Xue, Rosa, Stefanie, Qüesta, Julia I.

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Gene expression and in situ protein profiling of candidate SARS-CoV-2 receptors in human airway epithelial cells and lung tissue von Aguiar, Jennifer A, Tremblay, Benjamin J-M, Mansfield, Michael J, Woody, Owen, Lobb, Briallen, Banerjee, Arinjay, Chandiramohan, Abiram, Tiessen, Nicholas, Cao, Quynh, Dvorkin-Gheva, Anna, Revill, Spencer, Miller, Matthew S, Carlsten, Christopher, Organ, Louise, Joseph, Chitra, John, Alison, Hanson, Paul, Austin, Richard C, McManus, Bruce M, Jenkins, Gisli, Mossman, Karen, Ask, Kjetil, Doxey, Andrew C, Hirota, Jeremy A

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PhyloCorrelate: inferring bacterial gene–gene functional associations through large-scale phylogenetic profiling von Tremblay, Benjamin J -M, Lobb, Briallen, Doxey, Andrew C

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Mechanisms of epigenetic regulation of transcription by lncRNAs in plants von Tremblay, Benjamin J.M., Qüesta, Julia I.

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Ancient Clostridium DNA and variants of tetanus neurotoxins associated with human archaeological remains von Hodgins, Harold P., Chen, Pengsheng, Lobb, Briallen, Wei, Xin, Tremblay, Benjamin J. M., Mansfield, Michael J., Lee, Victoria C. Y., Lee, Pyung-Gang, Coffin, Jeffrey, Duggan, Ana T., Dolphin, Alexis E., Renaud, Gabriel, Dong, Min, Doxey, Andrew C.

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quaqc: efficient and quick ATAC-seq quality control and filtering von Tremblay, Benjamin J M, Qüesta, Julia I

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Phylogenomics of 8,839 Clostridioides difficile genomes reveals recombination-driven evolution and diversification of toxin A and B von Mansfield, Michael J, Tremblay, Benjamin J-M, Zeng, Ji, Wei, Xin, Hodgins, Harold, Worley, Jay, Bry, Lynn, Dong, Min, Doxey, Andrew C

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Endogenous CRISPR-Cas Systems in Group I Clostridium botulinum and Clostridium sporogenes Do Not Directly Target the Botulinum Neurotoxin Gene Cluster von Wentz, Travis G, Tremblay, Benjamin J M, Bradshaw, Marite, Doxey, Andrew C, Sharma, Shashi K, Sauer, John-Demian, Pellett, Sabine

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Identification of TFPI as a receptor reveals recombination-driven receptor switching in Clostridioides difficile toxin B variants von Tian, Songhai, Xiong, Xiaozhe, Zeng, Ji, Wang, Siyu, Tremblay, Benjamin Jean-Marie, Chen, Peng, Chen, Baohua, Liu, Min, Chen, Pengsheng, Sheng, Kuanwei, Zeve, Daniel, Qi, Wanshu, Breault, David T., Rodríguez, César, Gerhard, Ralf, Jin, Rongsheng, Doxey, Andrew C., Dong, Min

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An assessment of genome annotation coverage across the bacterial tree of life von Lobb, Briallen, Tremblay, Benjamin Jean-Marie, Moreno-Hagelsieb, Gabriel, Doxey, Andrew C

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PathFams: statistical detection of pathogen-associated protein domains von Lobb, Briallen, Tremblay, Benjamin Jean-Marie, Moreno-Hagelsieb, Gabriel, Doxey, Andrew C

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Predicting the recombination potential of severe acute respiratory syndrome coronavirus 2 and Middle East respiratory syndrome coronavirus von Banerjee, Arinjay, Doxey, Andrew C, Tremblay, Benjamin J-M, Mansfield, Michael J, Subudhi, Sonu, Hirota, Jeremy A, Miller, Matthew S, McArthur, Andrew G, Mubareka, Samira, Mossman, Karen

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Experimental and natural evidence of SARS-CoV-2-infection-induced activation of type I interferon responses von Banerjee, Arinjay, El-Sayes, Nader, Budylowski, Patrick, Jacob, Rajesh Abraham, Richard, Daniel, Maan, Hassaan, Aguiar, Jennifer A., Demian, Wael L., Baid, Kaushal, D'Agostino, Michael R., Ang, Jann Catherine, Murdza, Tetyana, Tremblay, Benjamin J.-M., Afkhami, Sam, Karimzadeh, Mehran, Irving, Aaron T., Yip, Lily, Ostrowski, Mario, Hirota, Jeremy A., Kozak, Robert, Capellini, Terence D., Miller, Matthew S., Wang, Bo, Mubareka, Samira, McGeer, Allison J., McArthur, Andrew G., Doxey, Andrew C., Mossman, Karen

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ABCF1 Regulates dsDNA-induced Immune Responses in Human Airway Epithelial Cells von Cao, Quynh T, Aguiar, Jennifer A, Tremblay, Benjamin J-M, Abbas, Nadin, Tiessen, Nicholas, Revill, Spencer, Makhdami, Nima, Ayoub, Anmar, Cox, Gerard, Ask, Kjetil, Doxey, Andrew C, Hirota, Jeremy A

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Expression of endocannabinoid system components in human airway epithelial cells: impact of sex and chronic respiratory disease status von Fantauzzi, Matthew F, Aguiar, Jennifer A, Tremblay, Benjamin J-M, Mansfield, Michael J, Yanagihara, Toyoshi, Chandiramohan, Abiram, Revill, Spencer, Ryu, Min Hyung, Carlsten, Chris, Ask, Kjetil, Stämpfli, Martin, Doxey, Andrew C, Hirota, Jeremy A

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universalmotif: An R package for biological motif analysis von Tremblay, Benjamin Jean-Marie

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A quoi tient l’autorité d'un récit ? L’exemple du guidage historique von Tremblay, Benjamin

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Non-coding regulation of transcription during plant development von Tremblay, Benjamin Jean-Marie

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A quoi tient l’autorité d'un récit ? L’exemple du guidage historique von Tremblay, Benjamin

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