Platon: identification and characterization of bacterial plasmid contigs in short-read draft assemblies exploiting protein sequence-based replicon distribution scores von Schwengers, Oliver, Barth, Patrick, Falgenhauer, Linda, Hain, Torsten, Chakraborty, Trinad, Goesmann, Alexander

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Multi-level inhibition of coronavirus replication by chemical ER stress von Shaban, Mohammed Samer, Müller, Christin, Mayr-Buro, Christin, Weiser, Hendrik, Meier-Soelch, Johanna, Albert, Benadict Vincent, Weber, Axel, Linne, Uwe, Hain, Torsten, Babayev, Ilya, Karl, Nadja, Hofmann, Nina, Becker, Stephan, Herold, Susanne, Schmitz, M. Lienhard, Ziebuhr, John, Kracht, Michael

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Respiratory and Intestinal Microbiota in Pediatric Lung Diseases—Current Evidence of the Gut–Lung Axis von Stricker, Sebastian, Hain, Torsten, Chao, Cho-Ming, Rudloff, Silvia

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Galleria mellonella as a Model System for Studying Listeria Pathogenesis von Mukherjee, Krishnendu, Altincicek, Boran, Hain, Torsten, Domann, Eugen, Vilcinskas, Andreas, Chakraborty, Trinad

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Listeria monocytogenes ActA-mediated escape from autophagic recognition von Ishii, Tetsuro, Yoshikawa, Yuko, Kim, Minsoo, Nakagawa, Ichiro, Chakraborty, Trinad, Sztul, Elizabeth, Sasakawa, Chihiro, Hain, Torsten, Yoshida, Mitsutaka, Mimuro, Hitomi, Kakizuka, Akira, Ogawa, Michinaga, Fukumatsu, Makoto, Yanagawa, Toru

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Rapid Identification and Typing of Listeria Species by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry von Barbuddhe, Sukhadeo B, Maier, Thomas, Schwarz, Gerold, Kostrzewa, Markus, Hof, Herbert, Domann, Eugen, Chakraborty, Trinad, Hain, Torsten

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Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome von Kuenne, Carsten, Billion, André, Mraheil, Mobarak Abu, Strittmatter, Axel, Daniel, Rolf, Goesmann, Alexander, Barbuddhe, Sukhadeo, Hain, Torsten, Chakraborty, Trinad

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Bisphosphonate-Related Osteonecrosis of the Jaw and Oral Microbiome: Clinical Risk Factors, Pathophysiology and Treatment Options von Jelin-Uhlig, Sapir, Weigel, Markus, Ott, Benjamin, Imirzalioglu, Can, Howaldt, Hans-Peter, Böttger, Sebastian, Hain, Torsten

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Glycerophospholipid remodeling is critical for orthoflavivirus infection von Hehner, Julia, Schneider, Laura, Woitalla, Anna, Ott, Benjamin, Vu, Kim Chi Thi, Schöbel, Anja, Hain, Torsten, Schwudke, Dominik, Herker, Eva

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Nucleocapsids of the Rift Valley fever virus ambisense S segment contain an exposed RNA element in the center that overlaps with the intergenic region von Shalamova, Lyudmila, Barth, Patrick, Pickin, Matthew J., Kouti, Kiriaki, Ott, Benjamin, Humpert, Katharina, Janssen, Stefan, Lorenzo, Gema, Brun, Alejandro, Goesmann, Alexander, Hain, Torsten, Hartmann, Roland K., Rossbach, Oliver, Weber, Friedemann

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New Lineage of Lassa Virus, Togo, 2016 von Whitmer, Shannon L M, Strecker, Thomas, Cadar, Daniel, Dienes, Hans-Peter, Faber, Kelly, Patel, Ketan, Brown, Shelley M, Davis, William G, Klena, John D, Rollin, Pierre E, Schmidt-Chanasit, Jonas, Fichet-Calvet, Elisabeth, Noack, Bernd, Emmerich, Petra, Rieger, Toni, Wolff, Svenja, Fehling, Sarah Katharina, Eickmann, Markus, Mengel, Jan Philipp, Schultze, Tilman, Hain, Torsten, Ampofo, William, Bonney, Kofi, Aryeequaye, Juliana Naa Dedei, Ribner, Bruce, Varkey, Jay B, Mehta, Aneesh K, Lyon, 3rd, G Marshall, Kann, Gerrit, De Leuw, Philipp, Schuettfort, Gundolf, Stephan, Christoph, Wieland, Ulrike, Fries, Jochen W U, Kochanek, Matthias, Kraft, Colleen S, Wolf, Timo, Nichol, Stuart T, Becker, Stephan, Ströher, Ute, Günther, Stephan

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Lipoteichoic acid deficiency permits normal growth but impairs virulence of Streptococcus pneumoniae von Heß, Nathalie, Waldow, Franziska, Kohler, Thomas P., Rohde, Manfred, Kreikemeyer, Bernd, Gómez-Mejia, Alejandro, Hain, Torsten, Schwudke, Dominik, Vollmer, Waldemar, Hammerschmidt, Sven, Gisch, Nicolas

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Identification of the general stress stimulon related to colonization in Enterococcus faecalis von Salze, Marine, Giard, Jean-Christophe, Riboulet-Bisson, Eliette, Hain, Torsten, Rincé, Alain, Muller, Cécile

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Pneumococcal hydrogen peroxide regulates host cell kinase activity von Bazant, Jasmin, Weiss, Astrid, Baldauf, Julia, Schermuly, Ralph Theo, Hain, Torsten, Lucas, Rudolf, Mraheil, Mobarak Abu

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High-resolution taxonomic examination of the oral microbiome after oil pulling with standardized sunflower seed oil and healthy participants: a pilot study von Griessl, Tim, Zechel-Gran, Silke, Olejniczak, Stefan, Weigel, Markus, Hain, Torsten, Domann, Eugen

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The intracellular sRNA transcriptome of Listeria monocytogenes during growth in macrophages von Mraheil, Mobarak A, Billion, André, Mohamed, Walid, Mukherjee, Krishnendu, Kuenne, Carsten, Pischimarov, Jordan, Krawitz, Christian, Retey, Julia, Hartsch, Thomas, Chakraborty, Trinad, Hain, Torsten

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Comparison of Widely Used Listeria monocytogenes Strains EGD, 10403S, and EGD-e Highlights Genomic Differences Underlying Variations in Pathogenicity von Bécavin, Christophe, Bouchier, Christiane, Lechat, Pierre, Archambaud, Cristel, Creno, Sophie, Gouin, Edith, Wu, Zongfu, Kühbacher, Andreas, Brisse, Sylvain, Pucciarelli, M. Graciela, García-del Portillo, Francisco, Hain, Torsten, Portnoy, Daniel A., Chakraborty, Trinad, Lecuit, Marc, Pizarro-Cerdá, Javier, Moszer, Ivan, Bierne, Hélène, Cossart, Pascale

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The microbiome landscape in pediatric Crohn's disease and therapeutic implications von Fetter, Karin, Weigel, Markus, Ott, Benjamin, Fritzenwanker, Moritz, Stricker, Sebastian, de Laffolie, Jan, Hain, Torsten

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Impact of Endogenous Pneumococcal Hydrogen Peroxide on the Activity and Release of Pneumolysin von Bazant, Jasmin, Ott, Benjamin, Hudel, Martina, Hain, Torsten, Lucas, Rudolf, Mraheil, Mobarak Abu

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ASA3P: An automatic and scalable pipeline for the assembly, annotation and higher-level analysis of closely related bacterial isolates von Schwengers, Oliver, Hoek, Andreas, Fritzenwanker, Moritz, Falgenhauer, Linda, Hain, Torsten, Chakraborty, Trinad, Goesmann, Alexander

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