ECCB2024: The 23rd European Conference on Computational Biology von Kukkonen-Macchi, Anu, Hautaniemi, Sampsa, Heil, Katharina F, Heinäniemi, Merja, Jensen, Lars Juhl, Junttila, Sini, Käll, Lukas, Laiho, Asta, Maccallum, Peter, Nykter, Matti, Persson, Bengt, Suomi, Tomi, Van Den Bossche, Tim, Nyrönen, Tommi H, Elo, Laura L

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International federation of genomic medicine databases using GA4GH standards von Thorogood, Adrian, Rehm, Heidi L., Goodhand, Peter, Page, Angela J.H., Joly, Yann, Baudis, Michael, Rambla, Jordi, Navarro, Arcadi, Nyronen, Tommi H., Linden, Mikael, Dove, Edward S., Fiume, Marc, Brudno, Michael, Cline, Melissa S., Birney, Ewan

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GA4GH Passport standard for digital identity and access permissions von Voisin, Craig, Linden, Mikael, Dyke, Stephanie O.M., Bowers, Sarion R., Alper, Pinar, Barkley, Maxmillian P., Bernick, David, Chao, Jianpeng, Courtot, Mélanie, Jeanson, Francis, Konopko, Melissa A., Kuba, Martin, Lawson, Jonathan, Leinonen, Jaakko, Li, Stephanie, Ota Wang, Vivian, Philippakis, Anthony A., Reinold, Kathy, Rushton, Gregory A., Spalding, J. Dylan, Törnroos, Juha, Tulchinsky, Ilya, Guidry Auvil, Jaime M., Nyrönen, Tommi H.

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Empirical validation of an automated approach to data use oversight von Cabili, Moran N., Lawson, Jonathan, Saltzman, Andrea, Rushton, Greg, O’Rourke, Pearl, Wilbanks, John, Rodriguez, Laura Lyman, Nyronen, Tommi, Courtot, Mélanie, Donnelly, Stacey, Philippakis, Anthony A.

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Best practices in bioinformatics training for life scientists von Via, Allegra, Blicher, Thomas, Bongcam-Rudloff, Erik, Brazas, Michelle D, Brooksbank, Cath, Budd, Aidan, De Las Rivas, Javier, Dreyer, Jacqueline, Fernandes, Pedro L, van Gelder, Celia, Jacob, Joachim, Jimenez, Rafael C, Loveland, Jane, Moran, Federico, Mulder, Nicola, Nyrönen, Tommi, Rother, Kristian, Schneider, Maria Victoria, Attwood, Teresa K

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Leveraging European infrastructures to access 1 million human genomes by 2022 von Saunders, Gary, Baudis, Michael, Becker, Regina, Beltran, Sergi, Béroud, Christophe, Birney, Ewan, Brooksbank, Cath, Brunak, Søren, Van den Bulcke, Marc, Drysdale, Rachel, Capella-Gutierrez, Salvador, Flicek, Paul, Florindi, Francesco, Goodhand, Peter, Gut, Ivo, Heringa, Jaap, Holub, Petr, Hooyberghs, Jef, Juty, Nick, Keane, Thomas M., Korbel, Jan O., Lappalainen, Ilkka, Leskosek, Brane, Matthijs, Gert, Mayrhofer, Michaela Th, Metspalu, Andres, Navarro, Arcadi, Newhouse, Steven, Nyrönen, Tommi, Page, Angela, Persson, Bengt, Palotie, Aarno, Parkinson, Helen, Rambla, Jordi, Salgado, David, Steinfelder, Erik, Swertz, Morris A., Valencia, Alfonso, Varma, Susheel, Blomberg, Niklas, Scollen, Serena

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The bio.tools registry of software tools and data resources for the life sciences von Ison, Jon, Ienasescu, Hans, Chmura, Piotr, Rydza, Emil, Ménager, Hervé, Kalaš, Matúš, Schwämmle, Veit, Grüning, Björn, Beard, Niall, Lopez, Rodrigo, Duvaud, Severine, Stockinger, Heinz, Persson, Bengt, Vařeková, Radka Svobodová, Raček, Tomáš, Vondrášek, Jiří, Peterson, Hedi, Salumets, Ahto, Jonassen, Inge, Hooft, Rob, Nyrönen, Tommi, Valencia, Alfonso, Capella, Salvador, Gelpí, Josep, Zambelli, Federico, Savakis, Babis, Leskošek, Brane, Rapacki, Kristoffer, Blanchet, Christophe, Jimenez, Rafael, Oliveira, Arlindo, Vriend, Gert, Collin, Olivier, van Helden, Jacques, Løngreen, Peter, Brunak, Søren

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Value of Pharmacogenetic Testing Assessed with Real‐World Drug Utilization and Genotype Data von Litonius, Kaisa, Kulla, Noora, Falkenbach, Petra, Kristiansson, Kati, Tarkiainen, E. Katriina, Ukkola‐Vuoti, Liisa, Cajanus, Kristiina, Korhonen, Mari, Khan, Sofia, Sistonen, Johanna, Orpana, Arto, Lindstedt, Mats, Nyrönen, Tommi, Perola, Markus, Turpeinen, Miia, Kytö, Ville, Tornio, Aleksi, Niemi, Mikko

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Docking and Three-Dimensional Quantitative Structure−Activity Relationship (3D QSAR) Analyses of Nonsteroidal Progesterone Receptor Ligands von Söderholm, Annu A, Lehtovuori, Pekka T, Nyrönen, Tommi H

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Registered access: authorizing data access von Dyke, Stephanie O M, Linden, Mikael, Lappalainen, Ilkka, De Argila, Jordi Rambla, Carey, Knox, Lloyd, David, Spalding, J Dylan, Cabili, Moran N, Kerry, Giselle, Foreman, Julia, Cutts, Tim, Shabani, Mahsa, Rodriguez, Laura L, Haeussler, Maximilian, Walsh, Brian, Jiang, Xiaoqian, Wang, Shuang, Perrett, Daniel, Boughtwood, Tiffany, Matern, Andreas, Brookes, Anthony J, Cupak, Miro, Fiume, Marc, Pandya, Ravi, Tulchinsky, Ilia, Scollen, Serena, Törnroos, Juha, Das, Samir, Evans, Alan C, Malin, Bradley A, Beck, Stephan, Brenner, Steven E, Nyrönen, Tommi, Blomberg, Niklas, Firth, Helen V, Hurles, Matthew, Philippakis, Anthony A, Rätsch, Gunnar, Brudno, Michael, Boycott, Kym M, Rehm, Heidi L, Baudis, Michael, Sherry, Stephen T, Kato, Kazuto, Knoppers, Bartha M, Baker, Dixie, Flicek, Paul

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Computationally Identified Novel Diphenyl- and Phenylpyridine Androgen Receptor Antagonist Structures von Söderholm, Annu A, Viiliäinen, Johanna, Lehtovuori, Pekka T, Eskelinen, Hanna, Roell, Daniela, Baniahmad, Aria, Nyrönen, Tommi H

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International federation of genomic medicine databases using GA4GH standards von Thorogood, Adrian, Rehm, Heidi L, Goodhand, Peter, Page, Angela J H, Joly, Yann, Baudis, Michael, Rambla, Jordi, Navarro, Arcadi, Nyronen, Tommi H, Linden, Mikael, Dove, Edward S, Fiume, Marc, Brudno, Michael, Cline, Melissa S, Birney, Ewan

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An In Silico Approach to Discovering Novel Inhibitors of Human Sirtuin Type 2 von Tervo, Anu J, Kyrylenko, Sergiy, Niskanen, Päivi, Salminen, Antero, Leppänen, Jukka, Nyrönen, Tommi H, Järvinen, Tomi, Poso, Antti

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Common ELIXIR Service for Researcher Authentication and Authorisation [version 1; peer review: 3 approved, 1 approved with reservations] von Linden, Mikael, Procházka, Michal, Lappalainen, Ilkka, Bucik, Dominik, Vyskocil, Pavel, Kuba, Martin, Silén, Sami, Belmann, Peter, Sczyrba, Alexander, Newhouse, Steven, Matyska, Ludek, Nyrönen, Tommi

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Identity in research infrastructure and scientific communication: Report from the 1st IRISC workshop, Helsinki Sep 12-13, 2011 von Thorisson, Gudmundur, Linden, Mikael, Brookes, Anthony, Byrne, Myles, Muilu, Juha, Nyronen, Tommi

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Orchestrating differential data access for translational research: a pilot implementation von Brandizi, Marco, Melnichuk, Olga, Bild, Raffael, Kohlmayer, Florian, Rodriguez-Castro, Benedicto, Spengler, Helmut, Kuhn, Klaus A, Kuchinke, Wolfgang, Ohmann, Christian, Mustonen, Timo, Linden, Mikael, Nyrönen, Tommi, Lappalainen, Ilkka, Brazma, Alvis, Sarkans, Ugis

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Bioinformatics Training Network (BTN): a community resource for bioinformatics trainers von SCHNEIDER, Maria V, WALTER, Peter, FERNANDES, Pedro, NYRÖNEN, Tommi H, DE LAS RIVAS, Javier, BLICHER, Thomas, JIMENEZ, Rafael C, LOVELAND, Jane, MCDOWALL, Jennifer, JONES, Phil, VAUGHAN, Brendan W, LOPEZ, Rodrigo, BLATTER, Marie-Claude, ATTWOOD, Teresa K, BROOKSBANK, Catherine, WATSON, James, BRAZOS, Michelle D, ROTHER, Kristian, BUDD, Aidan, VIA, Allegra, VAN GELDER, Celia W. G, JACOB, Joachim

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Leveraging European infrastructures to access 1 million human genomes by 2022 von Saunders, Gary, Baudis, Michael, Becker, Regina, Beltran, Sergi, Beroud, Christophe, Birney, Ewan, Brooksbank, Cath, Brunak, Soren, Van den Bulcke, Marc, Drysdale, Rachel, Capella-Gutierrez, Salvador, Flicek, Paul, Florindi, Francesco, Goodhand, Peter, Gut, Ivo, Heringa, Jaap, Holub, Petr, Hooyberghs, Jef, Juty, Nick, Keane, Thomas M, Korbel, Jan O, Lappalainen, Ilkka, Leskosek, Brane, Matthijs, Gert, Mayrhofer, Michaela Th, Metspalu, Andres, Navarro, Arcadi, Newhouse, Steven, Nyronen, Tommi, Page, Angela, Persson, Bengt, Palotie, Aarno, Parkinson, Helen, Rambla, Jordi, Salgado, David, Steinfelder, Erik, Swertz, Morris A, Valencia, Alfonso, Varma, Susheel, Blomberg, Niklas, Scollen, Serena

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BRUTUS:  Optimization of a Grid-Based Similarity Function for Rigid-Body Molecular Superposition. 1. Alignment and Virtual Screening Applications von Tervo, Anu J, Rönkkö, Toni, Nyrönen, Tommi H, Poso, Antti

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Comparing the Quality and Predictiveness between 3D QSAR Models Obtained from Manual and Automated Alignment von Tervo, Anu J, Nyrönen, Tommi H, Rönkkö, Toni, Poso, Antti

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