Grain versus AIN: Common rodent diets differentially affect health outcomes in adult C57BL/6j mice von Schipper, Lidewij, Tims, Sebastian, Timmer, Eva, Lohr, Julia, Rakhshandehroo, Maryam, Harvey, Louise

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Microbiota conservation and BMI signatures in adult monozygotic twins von Tims, Sebastian, Derom, Catherine, Jonkers, Daisy M, Vlietinck, Robert, Saris, Wim H, Kleerebezem, Michiel, de Vos, Willem M, Zoetendal, Erwin G

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Long-term monitoring of the human intestinal microbiota composition von Rajilić-Stojanović, Mirjana, Heilig, Hans G. H. J., Tims, Sebastian, Zoetendal, Erwin G., de Vos, Willem M.

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Faecal microbiota composition in adults is associated with the FUT2 gene determining the secretor status von Wacklin, Pirjo, Tuimala, Jarno, Nikkilä, Janne, Sebastian Tims, Mäkivuokko, Harri, Alakulppi, Noora, Laine, Pia, Rajilic-Stojanovic, Mirjana, Paulin, Lars, de Vos, Willem M, Mättö, Jaana

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Immunomodulatory and Prebiotic Effects of 2'-Fucosyllactose in Suckling Rats von Azagra-Boronat, Ignasi, Massot-Cladera, Malén, Mayneris-Perxachs, Jordi, Knipping, Karen, Van't Land, Belinda, Tims, Sebastian, Stahl, Bernd, Garssen, Johan, Franch, Àngels, Castell, Margarida, Rodríguez-Lagunas, M José, Pérez-Cano, Francisco J

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The Role of the Gut Microbiota in the Effects of Early-Life Stress and Dietary Fatty Acids on Later-Life Central and Metabolic Outcomes in Mice von Reemst, Kitty, Tims, Sebastian, Yam, Kit-Yi, Mischke, Mona, Knol, Jan, Brul, Stanley, Schipper, Lidewij, Korosi, Aniko

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Oligosaccharides Modulate Rotavirus-Associated Dysbiosis and TLR Gene Expression in Neonatal Rats von Azagra-Boronat, Ignasi, Massot-Cladera, Malén, Knipping, Karen, Van't Land, Belinda, Tims, Sebastian, Stahl, Bernd, Knol, Jan, Garssen, Johan, Franch, Àngels, Castell, Margarida, Pérez-Cano, Francisco J, Rodríguez-Lagunas, Maria J

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Global and Deep Molecular Analysis of Microbiota Signatures in Fecal Samples From Patients With Irritable Bowel Syndrome von Rajilić–Stojanović, Mirjana, Biagi, Elena, Heilig, Hans G.H.J, Kajander, Kajsa, Kekkonen, Riina A, Tims, Sebastian, de Vos, Willem M

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Human gut microbes impact host serum metabolome and insulin sensitivity von Pedersen, Helle Krogh, Gudmundsdottir, Valborg, Nielsen, Henrik Bjørn, Hyotylainen, Tuulia, Nielsen, Trine, Jensen, Benjamin A. H., Forslund, Kristoffer, Hildebrand, Falk, Prifti, Edi, Falony, Gwen, Le Chatelier, Emmanuelle, Levenez, Florence, Doré, Joel, Mattila, Ismo, Plichta, Damian R., Pöhö, Päivi, Hellgren, Lars I., Arumugam, Manimozhiyan, Sunagawa, Shinichi, Vieira-Silva, Sara, Jørgensen, Torben, Holm, Jacob Bak, Trošt, Kajetan, Consortium, MetaHIT, Kristiansen, Karsten, Brix, Susanne, Raes, Jeroen, Wang, Jun, Hansen, Torben, Bork, Peer, Brunak, Søren, Oresic, Matej, Ehrlich, S. Dusko, Pedersen, Oluf

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An integrated catalog of reference genes in the human gut microbiome von Li, Junhua, Jia, Huijue, Cai, Xianghang, Zhong, Huanzi, Feng, Qiang, Sunagawa, Shinichi, Arumugam, Manimozhiyan, Kultima, Jens Roat, Prifti, Edi, Nielsen, Trine, Juncker, Agnieszka Sierakowska, Manichanh, Chaysavanh, Chen, Bing, Zhang, Wenwei, Levenez, Florence, Wang, Juan, Xu, Xun, Xiao, Liang, Liang, Suisha, Zhang, Dongya, Zhang, Zhaoxi, Chen, Weineng, Zhao, Hailong, Al-Aama, Jumana Yousuf, Edris, Sherif, Yang, Huanming, Wang, Jian, Hansen, Torben, Nielsen, Henrik Bjørn, Brunak, Søren, Kristiansen, Karsten, Guarner, Francisco, Pedersen, Oluf, Doré, Joel, Ehrlich, S Dusko, Bork, Peer, Wang, Jun

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Fat, fibre and cancer risk in African Americans and rural Africans von O’Keefe, Stephen J. D., Li, Jia V., Lahti, Leo, Ou, Junhai, Carbonero, Franck, Mohammed, Khaled, Posma, Joram M., Kinross, James, Wahl, Elaine, Ruder, Elizabeth, Vipperla, Kishore, Naidoo, Vasudevan, Mtshali, Lungile, Tims, Sebastian, Puylaert, Philippe G. B., DeLany, James, Krasinskas, Alyssa, Benefiel, Ann C., Kaseb, Hatem O., Newton, Keith, Nicholson, Jeremy K., de Vos, Willem M., Gaskins, H. Rex, Zoetendal, Erwin G.

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Multi-part strategy for testing differential taxa abundance in sequencing data: A simulation study with an application to a microbiome study von Cianci, Daniela, Tims, Sebastian, Roeselers, Guus, El Galta, Rachid, Swinkels, Sophie

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Multi-part strategy for testing differential taxa abundance in sequencing data: A simulation study with an application to a microbiome study von Cianci, Daniela, Tims, Sebastian, Roeselers, Guus, El Galta, Rachid, Swinkels, Sophie

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A human gut microbial gene catalogue established by metagenomic sequencing von Zhu, Hongmei, Li, Shengting, Cao, Jianjun, Mende, Daniel R, Yu, Chang, Xu, Junming, Turner, Keith, Arumugam, Manimozhiyan, Nielsen, Trine, Wang, Jian, Guarner, Francisco, Bertalan, Marcelo, Sicheritz-Ponten, Thomas, Li, Shaochuan, Li, Songgang, Li, Ruiqiang, Qin, Junjie, Tap, Julien, Li, Yingrui, Pedersen, Oluf, Pons, Nicolas, Doré, Joel, Bork, Peer, Burgdorf, Kristoffer Solvsten, Renault, Pierre, Lepage, Patricia, Yamada, Takuji, Weissenbach, Jean, Xie, Yinlong, Zhou, Yan, Raes, Jeroen, Qin, Nan, Brunak, Søren, Liang, Huiqing, Levenez, Florence, Batto, Jean-Michel, Jian, Min, Li, Junhua, Parkhill, Julian, Linneberg, Allan, Nielsen, H. Bjørn, Kristiansen, Karsten, Yang, Huanming, Wang, Bo, Zheng, Huisong, Wang, Jun, Zhang, Xiuqing, Pelletier, Eric, Hansen, Torben, Le Paslier, Denis, Ehrlich, S. Dusko, Li, Dongfang, Manichanh, Chaysavanh

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Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes von Nielsen, H Bjørn, Almeida, Mathieu, Juncker, Agnieszka Sierakowska, Rasmussen, Simon, Li, Junhua, Sunagawa, Shinichi, Plichta, Damian R, Gautier, Laurent, Pedersen, Anders G, Le Chatelier, Emmanuelle, Pelletier, Eric, Bonde, Ida, Nielsen, Trine, Manichanh, Chaysavanh, Arumugam, Manimozhiyan, Batto, Jean-Michel, Quintanilha dos Santos, Marcelo B, Blom, Nikolaj, Borruel, Natalia, Burgdorf, Kristoffer S, Boumezbeur, Fouad, Casellas, Francesc, Doré, Joël, Dworzynski, Piotr, Guarner, Francisco, Hansen, Torben, Hildebrand, Falk, Kaas, Rolf S, Kennedy, Sean, Kristiansen, Karsten, Kultima, Jens Roat, Léonard, Pierre, Levenez, Florence, Lund, Ole, Moumen, Bouziane, Le Paslier, Denis, Pons, Nicolas, Pedersen, Oluf, Prifti, Edi, Qin, Junjie, Raes, Jeroen, Sørensen, Søren, Tap, Julien, Tims, Sebastian, Ussery, David W, Yamada, Takuji, Renault, Pierre, Sicheritz-Ponten, Thomas, Bork, Peer, Wang, Jun, Brunak, Søren, Ehrlich, S Dusko

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Fermented infant formula (with Bifidobacterium breve C50 and Streptococcus thermophilus O65) with prebiotic oligosaccharides is safe and modulates the gut microbiota towards a micr... von Béghin, Laurent, Tims, Sebastian, Roelofs, Mieke, Rougé, Carole, Oozeer, Raish, Rakza, Thameur, Chirico, Gaetano, Roeselers, Guus, Knol, Jan, Rozé, Jean Christophe, Turck, Dominique

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Influence of timing of maternal antibiotic administration during caesarean section on infant microbial colonisation: a randomised controlled trial von Dierikx, Thomas, Berkhout, Daniel, Eck, Anat, Tims, Sebastian, van Limbergen, Johan, Visser, Douwe, de Boer, Marjon, de Boer, Nanne, Touw, Daan, Benninga, Marc, Schierbeek, Nine, Visser, Laura, Knol, Jan, Roeselers, Guus, de Vries, Johanna, de Meij, Tim

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Reset of a critically disturbed microbial ecosystem: faecal transplant in recurrent Clostridium difficile infection von Fuentes, Susana, van Nood, Els, Tims, Sebastian, Heikamp-de Jong, Ineke, ter Braak, Cajo JF, Keller, Josbert J, Zoetendal, Erwin G, de Vos, Willem M

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Altered gut microbiome diversity and function in patients with propionic acidemia von Tims, Sebastian, Marsaux, Cyril, Pinto, Alex, Daly, Anne, Karall, Daniela, Kuhn, Mirjam, Santra, Saikat, Roeselers, Guus, Knol, Jan, MacDonald, Anita, Scholl-Bürgi, Sabine

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Prognostic Value of a Classification System for Iliofemoral Stenting in Patients with Chronic Venous Obstruction von Jalaie, Houman, Barbati, Mohammad E., Piao, Long, Doganci, Suat, Kucher, Nils, Dumantepe, Mert, Hartung, Olivier, Lichtenberg, Michael, Black, Stephen, O’Sullivan, Gerard, Avgerinos, Efthymios D., Davies, Alun H., Razavi, Mahmood K., Toonder, Irwin M., Sebastian, Tim, Erbel, Christian, Moini, Majid, de Graaf, Rick, Morris, Rachael I., O’Malley, Eoin, Chaer, Rabih A.

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