igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV) von Robinson, James T, Thorvaldsdottir, Helga, Turner, Douglass, Mesirov, Jill P

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Variant Review with the Integrative Genomics Viewer von Robinson, James T, Thorvaldsdóttir, Helga, Wenger, Aaron M, Zehir, Ahmet, Mesirov, Jill P

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Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration von Thorvaldsdóttir, Helga, Robinson, James T, Mesirov, Jill P

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Molecular signatures database (MSigDB) 3.0 von LIBERZON, Arthur, SUBRAMANIAN, Aravind, PINCHBACK, Reid, THORVALDSDOTTIR, Helga, TAMAYO, Pablo, MESIROV, Jill P

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Integrative genomic analysis by interoperation of bioinformatics tools in GenomeSpace von Qu, Kun, Garamszegi, Sara, Wu, Felix, Thorvaldsdottir, Helga, Liefeld, Ted, Ocana, Marco, Borges-Rivera, Diego, Pochet, Nathalie, Robinson, James T, Demchak, Barry, Hull, Tim, Ben-Artzi, Gil, Blankenberg, Daniel, Barber, Galt P, Lee, Brian T, Kuhn, Robert M, Nekrutenko, Anton, Segal, Eran, Ideker, Trey, Reich, Michael, Regev, Aviv, Chang, Howard Y, Mesirov, Jill P

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Extending support for mouse data in the Molecular Signatures Database (MSigDB) von Castanza, Anthony S., Recla, Jill M., Eby, David, Thorvaldsdóttir, Helga, Bult, Carol J., Mesirov, Jill P.

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Integrative genomics viewer von Robinson, James T, Mesirov, Jill P, Thorvaldsdóttir, Helga, Winckler, Wendy, Guttman, Mitchell, Lander, Eric S, Getz, Gad

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The Molecular Signatures Database Hallmark Gene Set Collection von Liberzon, Arthur, Birger, Chet, Thorvaldsdóttir, Helga, Ghandi, Mahmoud, Mesirov, Jill P., Tamayo, Pablo

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Juicebox.js Provides a Cloud-Based Visualization System for Hi-C Data von Robinson, James T., Turner, Douglass, Durand, Neva C., Thorvaldsdóttir, Helga, Mesirov, Jill P., Aiden, Erez Lieberman

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Quantitative visualization of alternative exon expression from RNA-seq data von Katz, Yarden, Wang, Eric T, Silterra, Jacob, Schwartz, Schraga, Wong, Bang, Thorvaldsdóttir, Helga, Robinson, James T, Mesirov, Jill P, Airoldi, Edoardo M, Burge, Christopher B

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Genome-wide analysis and visualization of copy number with CNVpytor in igv.js von Panda, Arijit, Suvakov, Milovan, Thorvaldsdottir, Helga, Mesirov, Jill P, Robinson, James T, Abyzov, Alexej

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The GenePattern Notebook Environment von Reich, Michael, Tabor, Thorin, Liefeld, Ted, Thorvaldsdóttir, Helga, Hill, Barbara, Tamayo, Pablo, Mesirov, Jill P.

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Abstract 5106: The GenePattern Notebook environment for reproducible cancer research von Reich, Michael M., Tabor, Thorin T., Liefeld, Ted, Hill, Barbara, Thorvaldsdottir, Helga, Mesirov, Jill P.

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Abstract 3207: GenePattern Notebook: An integrative analytical environment for cancer research von Reich, Michael M., Tabor, Thorin, Liefeld, Ted, Juarez, Edwin, Hill, Barbara, Thorvaldsdottir, Helga, Tamayo, Pablo, Mesirov, Jill P.

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A genomic data viewer for iPad von Thorvaldsdóttir, Helga, Robinson, James T, Turner, Douglass, Mesirov, Jill P

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Abstract 2279: The GenePattern Notebook environment for reproducible cancer research von Reich, Michael M., Tabor, Thorin T., Liefeld, Ted, Hill, Barbara, Thorvaldsdottir, Helga, Mesirov, Jill P.

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Abstract 2588: GenePattern Notebook: an environment for reproducible cancer research von Reich, Michael M., Tabor, Thorin T., Liefeld, Ted, Hill, Barbara, Thorvaldsdottir, Helga, Mesirov, Jill P.

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Abstract 3968: Exploring cancer datasets in the integrative genomics viewer (IGV) von Robinson, James T., Thorvaldsdottir, Helga, Mesirov, Jill

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Abstract 2073: Genomics to Notebook (g2nb): Extending the electronic notebook to address the needs of cancer bioinformatics von Reich, Michael M., Tabor, Thorin, Liefeld, John, Joshi, Jayadev, Kim, Forrest, Thorvaldsdottir, Helga, Blankenberg, Daniel, Mesirov, Jill P.

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Abstract 6568: Extended support for model organisms: The next frontier for the molecular signatures database von Castanza, Anthony S., Recla, Jill M., Eby, David, Wenzel, Alexander T., Thorvaldsdottir, Helga, Bult, Carol J., Mesirov, Jill P.

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