Temporal Response of the Human Virome to Immunosuppression and Antiviral Therapy von De Vlaminck, Iwijn, Khush, Kiran K., Strehl, Calvin, Kohli, Bitika, Luikart, Helen, Neff, Norma F., Okamoto, Jennifer, Snyder, Thomas M., Cornfield, David N., Nicolls, Mark R., Weill, David, Bernstein, Daniel, Valantine, Hannah A., Quake, Stephen R.

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A Public Database of Memory and Naive B-Cell Receptor Sequences von DeWitt, William S, Lindau, Paul, Snyder, Thomas M, Sherwood, Anna M, Vignali, Marissa, Carlson, Christopher S, Greenberg, Philip D, Duerkopp, Natalie, Emerson, Ryan O, Robins, Harlan S

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Universal noninvasive detection of solid organ transplant rejection von Snyder, Thomas M., Khush, Kiran K., Valantine, Hannah A., Quake, Stephen R., Herzenberg, Leonard A.

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Deep learning predicts hip fracture using confounding patient and healthcare variables von Badgeley, Marcus A., Zech, John R., Oakden-Rayner, Luke, Glicksberg, Benjamin S., Liu, Manway, Gale, William, McConnell, Michael V., Percha, Bethany, Snyder, Thomas M., Dudley, Joel T.

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DNA-Templated Organic Synthesis and Selection of a Library of Macrocycles von Gartner, Zev J., Tse, Brian N., Grubina, Rozalina, Doyon, Jeffrey B., Snyder, Thomas M., Liu, David R.

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T cell receptor sequencing identifies prior SARS-CoV-2 infection and correlates with neutralizing antibodies and disease severity von Elyanow, Rebecca, Snyder, Thomas M, Dalai, Sudeb C, Gittelman, Rachel M, Boonyaratanakornkit, Jim, Wald, Anna, Selke, Stacy, Wener, Mark H, Morishima, Chihiro, Greninger, Alexander L, Gale, Jr, Michael, Hsiang, Tien-Ying, Jing, Lichen, Holbrook, Michael R, Kaplan, Ian M, Zahid, H Jabran, May, Damon H, Carlson, Jonathan M, Baldo, Lance, Manley, Thomas, Robins, Harlan S, Koelle, David M

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Reaction discovery enabled by DNA-templated synthesis and in vitro selection von Liu, David R, Kanan, Matthew W, Rozenman, Mary M, Sakurai, Kaori, Snyder, Thomas M

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Longitudinal analysis of T cell receptor repertoires reveals shared patterns of antigen-specific response to SARS-CoV-2 infection von Gittelman, Rachel M, Lavezzo, Enrico, Snyder, Thomas M, Zahid, H Jabran, Carty, Cara L, Elyanow, Rebecca, Dalai, Sudeb, Kirsch, Ilan, Baldo, Lance, Manuto, Laura, Franchin, Elisa, Del Vecchio, Claudia, Pacenti, Monia, Boldrin, Caterina, Cattai, Margherita, Saluzzo, Francesca, Padoan, Andrea, Plebani, Mario, Simeoni, Fabio, Bordini, Jessica, Lorè, Nicola I, Lazarević, Dejan, Cirillo, Daniela M, Ghia, Paolo, Toppo, Stefano, Carlson, Jonathan M, Robins, Harlan S, Crisanti, Andrea, Tonon, Giovanni

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Distinct populations of antigen-specific tissue-resident CD8+ T cells in human cervix mucosa von Peng, Tao, Phasouk, Khamsone, Bossard, Emily, Klock, Alexis, Jin, Lei, Laing, Kerry J, Johnston, Christine, Williams, Noel A, Czartoski, Julie L, Varon, Dana, Long, Annalyssa N, Bielas, Jason H, Snyder, Thomas M, Robins, Harlan, Koelle, David M, McElrath, M Juliana, Wald, Anna, Corey, Lawrence, Zhu, Jia

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Feasibility of Computerized Adaptive Testing for Collection of Patient-Reported Outcomes After Inpatient Rehabilitation von Wong, Alex W.K., PhD, DPhil, Heinemann, Allen W., PhD, ABPP, Miskovic, Ana, BA, Semik, Patrick, BA, Snyder, Thomas M., MHA

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Dynamics of the cytotoxic T cell response to a model of acute viral infection von DeWitt, William S, Emerson, Ryan O, Lindau, Paul, Vignali, Marissa, Snyder, Thomas M, Desmarais, Cindy, Sanders, Catherine, Utsugi, Heidi, Warren, Edus H, McElrath, Juliana, Makar, Karen W, Wald, Anna, Robins, Harlan S

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Clinical Validation of a Novel T-Cell Receptor Sequencing Assay for Identification of Recent or Prior Severe Acute Respiratory Syndrome Coronavirus 2 Infection von Dalai, Sudeb C, Dines, Jennifer N, Snyder, Thomas M, Gittelman, Rachel M, Eerkes, Tera, Vaney, Pashmi, Howard, Sally, Akers, Kipp, Skewis, Lynell, Monteforte, Anthony, Witte, Pamela R, Wolf, Cristina, Nesse, Hans, Herndon, Megan, Qadeer, Jia, Duffy, Sarah, Svejnoha, Emily, Taromino, Caroline, Kaplan, Ian M, Alsobrook, John, Manley, Thomas, Baldo, Lance

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Translation of DNA into a Library of 13 000 Synthetic Small-Molecule Macrocycles Suitable for in Vitro Selection von Tse, Brian N, Snyder, Thomas M, Shen, Yinghua, Liu, David R

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microfluidic oligonucleotide synthesizer von Lee, Cheng-Chung, Snyder, Thomas M, Quake, Stephen R

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Perturbations of the T-cell receptor repertoire in response to SARS-CoV-2 in immunocompetent and immunocompromised individuals von Delmonte, Ottavia M., Oguz, Cihan, Dobbs, Kerry, Myint-Hpu, Katherine, Palterer, Boaz, Abers, Michael S., Draper, Deborah, Truong, Meng, Kaplan, Ian M., Gittelman, Rachel M., Zhang, Yu, Rosen, Lindsey B., Snow, Andrew L., Dalgard, Clifton L., Burbelo, Peter D., Imberti, Luisa, Sottini, Alessandra, Quiros-Roldan, Eugenia, Castelli, Francesco, Rossi, Camillo, Brugnoni, Duilio, Biondi, Andrea, Bettini, Laura Rachele, D’Angio, Mariella, Bonfanti, Paolo, Anderson, Megan V., Saracino, Annalisa, Chironna, Maria, Di Stefano, Mariantonietta, Fiore, Jose Ramon, Santantonio, Teresa, Castagnoli, Riccardo, Marseglia, Gian Luigi, Magliocco, Mary, Bosticardo, Marita, Pala, Francesca, Shaw, Elana, Matthews, Helen, Weber, Sarah E., Xirasagar, Sandhya, Barnett, Jason, Oler, Andrew J., Dimitrova, Dimana, Bergerson, Jenna R.E., McDermott, David H., Rao, V. Koneti, Murphy, Philip M., Holland, Steven M., Lisco, Andrea, Su, Helen C., Lionakis, Michail S., Cohen, Jeffrey I., Freeman, Alexandra F., Snyder, Thomas M., Lack, Justin, Notarangelo, Luigi D.

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Enhanced Functional Potential of Nucleic Acid Aptamer Libraries Patterned to Increase Secondary Structure von Ruff, Karen M, Snyder, Thomas M, Liu, David R

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CANDI: an R package and Shiny app for annotating radiographs and evaluating computer-aided diagnosis von Badgeley, Marcus A, Liu, Manway, Glicksberg, Benjamin S, Shervey, Mark, Zech, John, Shameer, Khader, Lehar, Joseph, Oermann, Eric K, McConnell, Michael V, Snyder, Thomas M, Dudley, Joel T

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Quantifying neurologic disease using biosensor measurements in-clinic and in free-living settings in multiple sclerosis von Chitnis, Tanuja, Glanz, Bonnie I., Gonzalez, Cindy, Healy, Brian C., Saraceno, Taylor J., Sattarnezhad, Neda, Diaz-Cruz, Camilo, Polgar-Turcsanyi, Mariann, Tummala, Subhash, Bakshi, Rohit, Bajaj, Vikram S., Ben-Shimol, David, Bikhchandani, Nikhil, Blocker, Alexander W., Burkart, Joshua, Cendrillon, Raphael, Cusack, Michael P., Demiralp, Emre, Jooste, Sarel Kobus, Kharbouch, Alaa, Lee, Amy A., Lehár, Joseph, Liu, Manway, Mahadevan, Swaminathan, Murphy, Mark, Norton, Linda C., Parlikar, Tushar A., Pathak, Anupam, Shoeb, Ali, Soderberg, Erin, Stephens, Philip, Stoertz, Aaron H., Thng, Florence, Tumkur, Kashyap, Wang, Hongsheng, Rhodes, Jane, Rudick, Richard A., Ransohoff, Richard M., Phillips, Glenn A., Bruzik, Effie, Marks, William J., Weiner, Howard L., Snyder, Thomas M.

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Ordered Multistep Synthesis in a Single Solution Directed by DNA Templates von Snyder, Thomas M., Liu, David R.

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Effects of Template Sequence and Secondary Structure on DNA-Templated Reactivity von Snyder, Thomas M, Tse, Brian N, Liu, David R

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