Benchmarking Sepsis Gene Expression Diagnostics Using Public Data von Sweeney, Timothy E., Khatri, Purvesh

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Genome-wide expression for diagnosis of pulmonary tuberculosis: a multicohort analysis von Sweeney, Timothy E, MD, Braviak, Lindsay, Tato, Cristina M, PhD, Khatri, Purvesh, Dr

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Integrated, Multi-cohort Analysis Identifies Conserved Transcriptional Signatures across Multiple Respiratory Viruses von Andres-Terre, Marta, McGuire, Helen M., Pouliot, Yannick, Bongen, Erika, Sweeney, Timothy E., Tato, Cristina M., Khatri, Purvesh

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The Human Gut Microbiome: A Review of the Effect of Obesity and Surgically Induced Weight Loss von Sweeney, Timothy E, Morton, John M

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Generalizable Biomarkers in Critical Care: Toward Precision Medicine von Sweeney, Timothy E., Khatri, Purvesh

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Redefining critical illness von Maslove, David M., Tang, Benjamin, Shankar-Hari, Manu, Lawler, Patrick R., Angus, Derek C., Baillie, J. Kenneth, Baron, Rebecca M., Bauer, Michael, Buchman, Timothy G., Calfee, Carolyn S., dos Santos, Claudia C., Giamarellos-Bourboulis, Evangelos J., Gordon, Anthony C., Kellum, John A., Knight, Julian C., Leligdowicz, Aleksandra, McAuley, Daniel F., McLean, Anthony S., Menon, David K., Meyer, Nuala J., Moldawer, Lyle L., Reddy, Kiran, Reilly, John P., Russell, James A., Sevransky, Jonathan E., Seymour, Christopher W., Shapiro, Nathan I., Singer, Mervyn, Summers, Charlotte, Sweeney, Timothy E., Thompson, B. Taylor, van der Poll, Tom, Venkatesh, Balasubramanian, Walley, Keith R., Walsh, Timothy S., Ware, Lorraine B., Wong, Hector R., Zador, Zsolt E., Marshall, John C.

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Metabolic surgery: Action via hormonal milieu changes, changes in bile acids or gut microbiota? A summary of the literature von Sweeney, Timothy E., MD, PhD, Morton, John M., MD, MPH

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Methods to increase reproducibility in differential gene expression via meta-analysis von Sweeney, Timothy E, Haynes, Winston A, Vallania, Francesco, Ioannidis, John P, Khatri, Purvesh

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A community approach to mortality prediction in sepsis via gene expression analysis von Sweeney, Timothy E., Perumal, Thanneer M., Henao, Ricardo, Nichols, Marshall, Howrylak, Judith A., Choi, Augustine M., Bermejo-Martin, Jesús F., Almansa, Raquel, Tamayo, Eduardo, Davenport, Emma E., Burnham, Katie L., Hinds, Charles J., Knight, Julian C., Woods, Christopher W., Kingsmore, Stephen F., Ginsburg, Geoffrey S., Wong, Hector R., Parnell, Grant P., Tang, Benjamin, Moldawer, Lyle L., Moore, Frederick E., Omberg, Larsson, Khatri, Purvesh, Tsalik, Ephraim L., Mangravite, Lara M., Langley, Raymond J.

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Diagnosing and Managing Sepsis by Probing the Host Response to Infection: Advances, Opportunities, and Challenges von Gunsolus, Ian L, Sweeney, Timothy E, Liesenfeld, Oliver, Ledeboer, Nathan A

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A generalizable 29-mRNA neural-network classifier for acute bacterial and viral infections von Mayhew, Michael B., Buturovic, Ljubomir, Luethy, Roland, Midic, Uros, Moore, Andrew R., Roque, Jonasel A., Shaller, Brian D., Asuni, Tola, Rawling, David, Remmel, Melissa, Choi, Kirindi, Wacker, James, Khatri, Purvesh, Rogers, Angela J., Sweeney, Timothy E.

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Complement pathway amplifies caspase-11-dependent cell death and endotoxin-induced sepsis severity von Napier, Brooke A, Brubaker, Sky W, Sweeney, Timothy E, Monette, Patrick, Rothmeier, Greggory H, Gertsvolf, Nina A, Puschnik, Andreas, Carette, Jan E, Khatri, Purvesh, Monack, Denise M

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Quantum control of a spin qubit coupled to a photonic crystal cavity von Carter, Samuel G., Sweeney, Timothy M., Kim, Mijin, Kim, Chul Soo, Solenov, Dmitry, Economou, Sophia E., Reinecke, Thomas L., Yang, Lily, Bracker, Allan S., Gammon, Daniel

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Learning statistical models of phenotypes using noisy labeled training data von Agarwal, Vibhu, Podchiyska, Tanya, Banda, Juan M, Goel, Veena, Leung, Tiffany I, Minty, Evan P, Sweeney, Timothy E, Gyang, Elsie, Shah, Nigam H

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Unsupervised Analysis of Transcriptomics in Bacterial Sepsis Across Multiple Datasets Reveals Three Robust Clusters von Sweeney, Timothy E., Azad, Tej D., Donato, Michele, Haynes, Winston A., Perumal, Thanneer M., Henao, Ricardo, Bermejo-Martin, Jesús F., Almansa, Raquel, Tamayo, Eduardo, Howrylak, Judith A., Choi, Augustine, Parnell, Grant P., Tang, Benjamin, Nichols, Marshall, Woods, Christopher W., Ginsburg, Geoffrey S., Kingsmore, Stephen F., Omberg, Larsson, Mangravite, Lara M., Wong, Hector R., Tsalik, Ephraim L., Langley, Raymond J., Khatri, Purvesh

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Unique transcriptomic response to sepsis is observed among patients of different age groups von Raymond, Steven L, López, María Cecilia, Baker, Henry V, Larson, Shawn D, Efron, Philip A, Sweeney, Timothy E, Khatri, Purvesh, Moldawer, Lyle L, Wynn, James L

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Encouraging Mindfulness in Medical House Staff via Smartphone App: A Pilot Study von Wen, Louise, Sweeney, Timothy E., Welton, Lindsay, Trockel, Mickey, Katznelson, Laurence

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A robust gene expression signature for NASH in liver expression data von Hasin-Brumshtein, Yehudit, Sakaram, Suraj, Khatri, Purvesh, He, Yudong D., Sweeney, Timothy E.

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Transcriptional markers in response to hydrocortisone in sepsis in ADRENAL: a step toward precision medicine von Sweeney, Timothy E., Wong, Hector R.

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Comprehensive Validation of the FAIM3:PLAC8 Ratio in Time-matched Public Gene Expression Data von Sweeney, Timothy E, Khatri, Purvesh

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