RADICL-seq identifies general and cell type–specific principles of genome-wide RNA-chromatin interactions von Bonetti, Alessandro, Agostini, Federico, Suzuki, Ana Maria, Hashimoto, Kosuke, Pascarella, Giovanni, Gimenez, Juliette, Roos, Leonie, Nash, Alex J., Ghilotti, Marco, Cameron, Christopher J.  F., Valentine, Matthew, Medvedeva, Yulia A., Noguchi, Shuhei, Agirre, Eneritz, Kashi, Kaori, Samudyata, Luginbühl, Joachim, Cazzoli, Riccardo, Agrawal, Saumya, Luscombe, Nicholas M., Blanchette, Mathieu, Kasukawa, Takeya, Hoon, Michiel de, Arner, Erik, Lenhard, Boris, Plessy, Charles, Castelo-Branco, Gonçalo, Orlando, Valerio, Carninci, Piero

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Dual-initiation promoters with intertwined canonical and TCT/TOP transcription start sites diversify transcript processing von Nepal, Chirag, Hadzhiev, Yavor, Balwierz, Piotr, Tarifeño-Saldivia, Estefanía, Cardenas, Ryan, Wragg, Joseph W., Suzuki, Ana-Maria, Carninci, Piero, Peers, Bernard, Lenhard, Boris, Andersen, Jesper B., Müller, Ferenc

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Spatial diversity of ichthyoplankton in the lower stretch of the Amazon River, Pará, Brazil von Cajado, Ruineris, Oliveira, Lucas, Suzuki, Maria Aparecida, Zacardi, Diego

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Noninvasive Diagnosis of Seedless Fruit Using Deep Learning in Persimmon von Masuda, Kanae, Suzuki, Maria, Baba, Kohei, Takeshita, Kouki, Suzuki, Tetsuya, Sugiura, Mayu, Niikawa, Takeshi, Uchida, Seiichi, Akagi, Takashi

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Dynamic regulation of the transcription initiation landscape at single nucleotide resolution during vertebrate embryogenesis von Nepal, Chirag, Hadzhiev, Yavor, Previti, Christopher, Haberle, Vanja, Li, Nan, Takahashi, Hazuki, Suzuki, Ana Maria M, Sheng, Ying, Abdelhamid, Rehab F, Anand, Santosh, Gehrig, Jochen, Akalin, Altuna, Kockx, Christel E M, van der Sloot, Antoine A J, van Ijcken, Wilfred F J, Armant, Olivier, Rastegar, Sepand, Watson, Craig, Strähle, Uwe, Stupka, Elia, Carninci, Piero, Lenhard, Boris, Müller, Ferenc

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Diversity and dynamics of the Drosophila transcriptome von Brown, James B., Boley, Nathan, Eisman, Robert, May, Gemma E., Stoiber, Marcus H., Duff, Michael O., Booth, Ben W., Wen, Jiayu, Park, Soo, Suzuki, Ana Maria, Wan, Kenneth H., Yu, Charles, Zhang, Dayu, Carlson, Joseph W., Cherbas, Lucy, Eads, Brian D., Miller, David, Mockaitis, Keithanne, Roberts, Johnny, Davis, Carrie A., Frise, Erwin, Hammonds, Ann S., Olson, Sara, Shenker, Sol, Sturgill, David, Samsonova, Anastasia A., Weiszmann, Richard, Robinson, Garret, Hernandez, Juan, Andrews, Justen, Bickel, Peter J., Carninci, Piero, Cherbas, Peter, Gingeras, Thomas R., Hoskins, Roger A., Kaufman, Thomas C., Lai, Eric C., Oliver, Brian, Perrimon, Norbert, Graveley, Brenton R., Celniker, Susan E.

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Two independent transcription initiation codes overlap on vertebrate core promoters von Haberle, Vanja, Li, Nan, Hadzhiev, Yavor, Plessy, Charles, Previti, Christopher, Nepal, Chirag, Gehrig, Jochen, Dong, Xianjun, Akalin, Altuna, Suzuki, Ana Maria, van IJcken, Wilfred F. J., Armant, Olivier, Ferg, Marco, Strähle, Uwe, Carninci, Piero, Müller, Ferenc, Lenhard, Boris

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Broad Heterochromatic Domains Open in Gonocyte Development Prior to De Novo DNA Methylation von Yamanaka, Soichiro, Nishihara, Hidenori, Toh, Hidehiro, Eijy Nagai, Luis Augusto, Hashimoto, Kosuke, Park, Sung-Joon, Shibuya, Aoi, Suzuki, Ana Maria, Tanaka, Yujiro, Nakai, Kenta, Carninci, Piero, Sasaki, Hiroyuki, Siomi, Haruhiko

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Single-Nucleotide Resolution Mapping of Hepatitis B Virus Promoters in Infected Human Livers and Hepatocellular Carcinoma von Altinel, Kübra, Hashimoto, Kosuke, Wei, Yu, Neuveut, Christine, Gupta, Ishita, Suzuki, Ana Maria, Dos Santos, Alexandre, Moreau, Pierrick, Xia, Tian, Kojima, Soichi, Kato, Sachi, Takikawa, Yasuhiro, Hidaka, Isao, Shimizu, Masahito, Matsuura, Tomokazu, Tsubota, Akihito, Ikeda, Hitoshi, Nagoshi, Sumiko, Suzuki, Harukazu, Michel, Marie-Louise, Samuel, Didier, Buendia, Marie Annick, Faivre, Jamila, Carninci, Piero

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CAGE profiling of ncRNAs in hepatocellular carcinoma reveals widespread activation of retroviral LTR promoters in virus-induced tumors von Hashimoto, Kosuke, Suzuki, Ana Maria, Dos Santos, Alexandre, Desterke, Christophe, Collino, Agnese, Ghisletti, Serena, Braun, Emilie, Bonetti, Alessandro, Fort, Alexandre, Qin, Xian-Yang, Radaelli, Enrico, Kaczkowski, Bogumil, Forrest, Alistair R R, Kojima, Soichi, Samuel, Didier, Natoli, Gioacchino, Buendia, Marie Annick, Faivre, Jamila, Carninci, Piero

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Deep Learning Predicts Rapid Over-softening and Shelf Life in Persimmon Fruits von Suzuki, Maria, Masuda, Kanae, Asakuma, Hideaki, Takeshita, Kouki, Baba, Kohei, Kubo, Yasutaka, Ushijima, Koichiro, Uchida, Seiichi, Akagi, Takashi

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Design and Expression of a Dimeric Form of Human Immunodeficiency Virus Type 1 Antibody 2G12 with Increased Neutralization Potency von WEST, Anthony P, GALIMIDI, Rachel P, FOGLESONG, Christopher P, GNANAPRAGASAM, Priyanthi N. P, HUEY-TUBMAN, Kathryn E, KLEIN, Joshua S, SUZUKI, Maria D, TIANGCO, Noreen E, VIELMETTER, Jost, BJORKMAN, Pamela J

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Digital expression profiling of the compartmentalized translatome of Purkinje neurons von Kratz, Anton, Beguin, Pascal, Kaneko, Megumi, Chimura, Takahiko, Suzuki, Ana Maria, Matsunaga, Atsuko, Kato, Sachi, Bertin, Nicolas, Lassmann, Timo, Vigot, Réjan, Carninci, Piero, Plessy, Charles, Launey, Thomas

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Author Correction: RADICL-seq identifies general and cell type–specific principles of genome-wide RNA-chromatin interactions von Bonetti, Alessandro, Agostini, Federico, Suzuki, Ana Maria, Hashimoto, Kosuke, Pascarella, Giovanni, Gimenez, Juliette, Roos, Leonie, Nash, Alex J., Ghilotti, Marco, Cameron, Christopher J. F., Valentine, Matthew, Medvedeva, Yulia A., Noguchi, Shuhei, Agirre, Eneritz, Kashi, Kaori, Samudyata, Luginbühl, Joachim, Cazzoli, Riccardo, Agrawal, Saumya, Luscombe, Nicholas M., Blanchette, Mathieu, Kasukawa, Takeya, de Hoon, Michiel, Arner, Erik, Lenhard, Boris, Plessy, Charles, Castelo-Branco, Gonçalo, Orlando, Valerio, Carninci, Piero

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Transcriptomic Interpretation on Explainable AI-Guided Intuition Uncovers Premonitory Reactions of Disordering Fate in Persimmon Fruit von Masuda, Kanae, Kuwada, Eriko, Suzuki, Maria, Suzuki, Tetsuya, Niikawa, Takeshi, Uchida, Seiichi, Akagi, Takashi

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OR-29 - UTILIZAÇÃO DO FILMARRAY® NO DIAGNÓSTICO DE INFECÇÕES DO SISTEMA NERVOSO CENTRAL: EXPERIÊNCIA EM 2.502 CASOS von Massaia, Irineu, Salomão, Daiane, Veja, Márcio, Martins, Alvaro, Monteiro, Myrna, Santos, Maria Ivonete, Suzuki, Maria Walter, Pereira, Marcia, Senne, Carlos, Domingues, Renan

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OR-29 - UTILIZAÇÃO DO FILMARRAY® NO DIAGNÓSTICO DE INFECÇÕES DO SISTEMA NERVOSO CENTRAL: EXPERIÊNCIA EM 2.502 CASOS von Massaia, Irineu, Salomão, Daiane, Veja, Márcio, Martins, Alvaro, Monteiro, Myrna, Santos, Maria Ivonete, Suzuki, Maria Walter, Pereira, Marcia, Senne, Carlos, Domingues, Renan

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Noninvasive Diagnosis of Seedless Fruit Using Deep Learning in Persimmon von Masuda, Kanae, Suzuki, Maria, Baba, Kohei, Takeshita, Kouki, Suzuki, Tetsuya, Sugiura, Mayu, Niikawa, Takeshi, Uchida, Seiichi, Akagi, Takashi

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Comparative validation of the D. melanogaster modENCODE transcriptome annotation von Chen, Zhen-Xia, Sturgill, David, Qu, Jiaxin, Jiang, Huaiyang, Park, Soo, Boley, Nathan, Suzuki, Ana Maria, Fletcher, Anthony R, Plachetzki, David C, FitzGerald, Peter C, Artieri, Carlo G, Atallah, Joel, Barmina, Olga, Brown, James B, Blankenburg, Kerstin P, Clough, Emily, Dasgupta, Abhijit, Gubbala, Sai, Han, Yi, Jayaseelan, Joy C, Kalra, Divya, Kim, Yoo-Ah, Kovar, Christie L, Lee, Sandra L, Li, Mingmei, Malley, James D, Malone, John H, Mathew, Tittu, Mattiuzzo, Nicolas R, Munidasa, Mala, Muzny, Donna M, Ongeri, Fiona, Perales, Lora, Przytycka, Teresa M, Pu, Ling-Ling, Robinson, Garrett, Thornton, Rebecca L, Saada, Nehad, Scherer, Steven E, Smith, Harold E, Vinson, Charles, Warner, Crystal B, Worley, Kim C, Wu, Yuan-Qing, Zou, Xiaoyan, Cherbas, Peter, Kellis, Manolis, Eisen, Michael B, Piano, Fabio, Kionte, Karin, Fitch, David H, Sternberg, Paul W, Cutter, Asher D, Duff, Michael O, Hoskins, Roger A, Graveley, Brenton R, Gibbs, Richard A, Bickel, Peter J, Kopp, Artyom, Carninci, Piero, Celniker, Susan E, Oliver, Brian, Richards, Stephen

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Deep Learning Predicts Rapid Over-softening and Shelf Life in Persimmon Fruits von Suzuki, Maria, Masuda, Kanae, Asakuma, Hideaki, Takeshita, Kouki, Baba, Kohei, Kubo, Yasutaka, Ushijima, Koichiro, Uchida, Seiichi, Akagi, Takashi

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