DEEPred: Automated Protein Function Prediction with Multi-task Feed-forward Deep Neural Networks von Sureyya Rifaioglu, Ahmet, Doğan, Tunca, Jesus Martin, Maria, Cetin-Atalay, Rengul, Atalay, Volkan

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Recent applications of deep learning and machine intelligence on in silico drug discovery: methods, tools and databases von Rifaioglu, Ahmet Sureyya, Atas, Heval, Martin, Maria Jesus, Cetin-Atalay, Rengul, Atalay, Volkan, Doğan, Tunca

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ECPred: a tool for the prediction of the enzymatic functions of protein sequences based on the EC nomenclature von Dalkiran, Alperen, Rifaioglu, Ahmet Sureyya, Martin, Maria Jesus, Cetin-Atalay, Rengul, Atalay, Volkan, Doğan, Tunca

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CROssBAR: comprehensive resource of biomedical relations with knowledge graph representations von Doğan, Tunca, Atas, Heval, Joshi, Vishal, Atakan, Ahmet, Rifaioglu, Ahmet Sureyya, Nalbat, Esra, Nightingale, Andrew, Saidi, Rabie, Volynkin, Vladimir, Zellner, Hermann, Cetin-Atalay, Rengul, Martin, Maria, Atalay, Volkan

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Predicting the Specificity- Determining Positions of Receptor Tyrosine Kinase Axl von Karakulak, Tülay, Rifaioglu, Ahmet Sureyya, Rodrigues, João P. G. L. M., Karaca, Ezgi

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DEEPScreen: high performance drug-target interaction prediction with convolutional neural networks using 2-D structural compound representations von Rifaioglu, Ahmet Sureyya, Nalbat, Esra, Atalay, Volkan, Martin, Maria Jesus, Cetin-Atalay, Rengul, Do an, Tunca

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Drug Repurposing Approach to Identify Candidate Drug Molecules for Hepatocellular Carcinoma von Baser, Tugce, Rifaioglu, Ahmet Sureyya, Atalay, Mehmet Volkan, Atalay, Rengul Cetin

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iBioProVis: interactive visualization and analysis of compound bioactivity space von Donmez, Ataberk, Rifaioglu, Ahmet Sureyya, Acar, Aybar, Doğan, Tunca, Cetin-Atalay, Rengul, Atalay, Volkan

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iBioProVis: interactive visualization and analysis of compound bioactivity space von Donmez, Ataberk, Rifaioglu, Ahmet Sureyya, Acar, Aybar, Doğan, Tunca, Cetin-Atalay, Rengul, Atalay, Volkan

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SLPred: a multi-view subcellular localization prediction tool for multi-location human proteins von Özsarı, Gökhan, Rifaioglu, Ahmet Sureyya, Atakan, Ahmet, Doğan, Tunca, Martin, Maria Jesus, Çetin Atalay, Rengül, Atalay, Volkan

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Abstract 5235: In vitro validation of drug-target interactions revealed in silico by Comprehensive Resource of Biomedical Relations with Network Representations and Deep Learning (... von Nalbat, Esra, Rifaioglu, Ahmet Sureyya, Dogan, Tunca, Martin, Maria Jesus, Cetin-Atalay, Rengul, Atalay, Volkan

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Large‐scale automated function prediction of protein sequences and an experimental case study validation on PTEN transcript variants von Rifaioglu, Ahmet Sureyya, Doğan, Tunca, Saraç, Ömer Sinan, Ersahin, Tulin, Saidi, Rabie, Atalay, Mehmet Volkan, Martin, Maria Jesus, Cetin‐Atalay, Rengul

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Data Centric Molecular Analysis and Evaluation of Hepatocellular Carcinoma Therapeutics Using Machine Intelligence-Based Tools von Cetin-Atalay, Rengul, Kahraman, Deniz Cansen, Nalbat, Esra, Rifaioglu, Ahmet Sureyya, Atakan, Ahmet, Donmez, Ataberk, Atas, Heval, Atalay, M. Volkan, Acar, Aybar C., Doğan, Tunca

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Multi-task Deep Neural Networks in Automated Protein Function Prediction von Rifaioglu, Ahmet Sureyya, Doğan, Tunca, Martin, Maria Jesus, Cetin-Atalay, Rengul, Atalay, Mehmet Volkan

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Multi-task Deep Neural Networks in Automated Protein Function Prediction von Rifaioglu, Ahmet Sureyya, Tunca Doğan, Maria Jesus Martin, Cetin-Atalay, Rengul, Atalay, Mehmet Volkan

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