The Intestine Harbors Functionally Distinct Homeostatic Tissue-Resident and Inflammatory Th17 Cells von Omenetti, Sara, Bussi, Claudio, Metidji, Amina, Iseppon, Andrea, Lee, Sunjae, Tolaini, Mauro, Li, Ying, Kelly, Gavin, Chakravarty, Probir, Shoaie, Saeed, Gutierrez, Maximiliano G., Stockinger, Brigitta

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A subcellular map of the human proteome von Thul, Peter J., Åkesson, Lovisa, Wiking, Mikaela, Mahdessian, Diana, Geladaki, Aikaterini, Blal, Hammou Ait, Alm, Tove, Asplund, Anna, Björk, Lars, Breckels, Lisa M., Bäckström, Anna, Danielsson, Frida, Fagerberg, Linn, Fall, Jenny, Gatto, Laurent, Gnann, Christian, Hober, Sophia, Hjelmare, Martin, Johansson, Fredric, Lee, Sunjae, Lindskog, Cecilia, Mulder, Jan, Mulvey, Claire M., Nilsson, Peter, Oksvold, Per, Rockberg, Johan, Schutten, Rutger, Schwenk, Jochen M., Sivertsson, Åsa, Sjöstedt, Evelina, Skogs, Marie, Stadler, Charlotte, Sullivan, Devin P., Tegel, Hanna, Winsnes, Casper, Zhang, Cheng, Zwahlen, Martin, Mardinoglu, Adil, Pontén, Fredrik, von Feilitzen, Kalle, Lilley, Kathryn S., Uhlén, Mathias, Lundberg, Emma

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Systematic analysis of gut microbiome reveals the role of bacterial folate and homocysteine metabolism in Parkinson’s disease von Rosario, Dorines, Bidkhori, Gholamreza, Lee, Sunjae, Bedarf, Janis, Hildebrand, Falk, Le Chatelier, Emmanuelle, Uhlen, Mathias, Ehrlich, Stanislav Dusko, Proctor, Gordon, Wüllner, Ullrich, Mardinoglu, Adil, Shoaie, Saeed

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Compositional and functional differences of the mucosal microbiota along the intestine of healthy individuals von Vaga, Stefania, Lee, Sunjae, Ji, Boyang, Andreasson, Anna, Talley, Nicholas J., Agréus, Lars, Bidkhori, Gholamreza, Kovatcheva-Datchary, Petia, Park, Junseok, Lee, Doheon, Proctor, Gordon, Ehrlich, Stanislav Dusko, Nielsen, Jens, Engstrand, Lars, Shoaie, Saeed

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Abundance and diversity of resistomes differ between healthy human oral cavities and gut von Carr, Victoria R., Witherden, Elizabeth A., Lee, Sunjae, Shoaie, Saeed, Mullany, Peter, Proctor, Gordon B., Gomez-Cabrero, David, Moyes, David L.

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Integrated Network Analysis Reveals an Association between Plasma Mannose Levels and Insulin Resistance von Lee, Sunjae, Zhang, Cheng, Kilicarslan, Murat, Piening, Brian D., Bjornson, Elias, Hallström, Björn M., Groen, Albert K., Ferrannini, Ele, Laakso, Markku, Snyder, Michael, Blüher, Matthias, Uhlen, Mathias, Nielsen, Jens, Smith, Ulf, Serlie, Mireille J., Boren, Jan, Mardinoglu, Adil

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Simplified Intestinal Microbiota to Study Microbe-Diet-Host Interactions in a Mouse Model von Kovatcheva-Datchary, Petia, Shoaie, Saeed, Lee, Sunjae, Wahlström, Annika, Nookaew, Intawat, Hallen, Anna, Perkins, Rosie, Nielsen, Jens, Bäckhed, Fredrik

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Precise Characterization of Genetic Interactions in Cancer via Molecular Network Refining Processes von Jung, Jinmyung, Hwang, Yongdeuk, Ahn, Hongryul, Lee, Sunjae, Yoo, Sunyong

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A Systems Biology Approach to Investigating the Interaction between Serotonin Synthesis by Tryptophan Hydroxylase and the Metabolic Homeostasis von Park, Suhyeon, Kim, Yumin, Lee, Jibeom, Lee, Jeong Yun, Kim, Hail, Lee, Sunjae, Oh, Chang-Myung

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Mature Human White Adipocytes Cultured under Membranes Maintain Identity, Function, and Can Transdifferentiate into Brown-like Adipocytes von Harms, Matthew J., Li, Qian, Lee, Sunjae, Zhang, Cheng, Kull, Bengt, Hallen, Stefan, Thorell, Anders, Alexandersson, Ida, Hagberg, Carolina E., Peng, Xiao-Rong, Mardinoglu, Adil, Spalding, Kirsty L., Boucher, Jeremie

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Predicting herb-disease associations using network-based measures in human protein interactome von Wang, Seunghyun, Lee, Hyun Chang, Lee, Sunjae

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Host-mycobiome metabolic interactions in health and disease von Begum, Neelu, Harzandi, Azadeh, Lee, Sunjae, Uhlen, Mathias, Moyes, David L., Shoaie, Saeed

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Systems Biology of Human Microbiome for the Prediction of Personal Glycaemic Response von Kirtipal, Nikhil, Seo, Youngchang, Son, Jangwon, Lee, Sunjae

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A sexually transmitted sugar orchestrates reproductive responses to nutritional stress von Kim, Seong-Jin, Lee, Kang-Min, Park, Si Hyung, Yang, Taekyun, Song, Ingyu, Rai, Fumika, Hoshino, Ryo, Yun, Minsik, Zhang, Chen, Kim, Jae-Il, Lee, Sunjae, Suh, Greg S. B., Niwa, Ryusuke, Park, Zee-Yong, Kim, Young-Joon

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TCSBN: a database of tissue and cancer specific biological networks von Lee, Sunjae, Zhang, Cheng, Arif, Muhammad, Liu, Zhengtao, Benfeitas, Rui, Bidkhori, Gholamreza, Deshmukh, Sumit, Al Shobky, Mohamed, Lovric, Alen, Boren, Jan, Nielsen, Jens, Uhlen, Mathias, Mardinoglu, Adil

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Trogocytic molting of T cell microvilli upregulates T cell receptor surface expression and promotes clonal expansion von Park, Jeong-Su, Kim, Jun-Hyeong, Soh, Won-Chang, Kim, Na-Young, Lee, Kyung-Sik, Kim, Chang-Hyun, Chung, Ik-Joo, Lee, Sunjae, Kim, Hye-Ran, Jun, Chang-Duk

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Integrative Personal Omics Profiles during Periods of Weight Gain and Loss von Piening, Brian D., Zhou, Wenyu, Contrepois, Kévin, Röst, Hannes, Gu Urban, Gucci Jijuan, Mishra, Tejaswini, Hanson, Blake M., Bautista, Eddy J., Leopold, Shana, Yeh, Christine Y., Spakowicz, Daniel, Banerjee, Imon, Chen, Cynthia, Kukurba, Kimberly, Perelman, Dalia, Craig, Colleen, Colbert, Elizabeth, Salins, Denis, Rego, Shannon, Lee, Sunjae, Zhang, Cheng, Wheeler, Jessica, Sailani, M. Reza, Liang, Liang, Abbott, Charles, Gerstein, Mark, Mardinoglu, Adil, Smith, Ulf, Rubin, Daniel L., Pitteri, Sharon, Sodergren, Erica, McLaughlin, Tracey L., Weinstock, George M., Snyder, Michael P.

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Metabolic modelling of the human gut microbiome in type 2 diabetes patients in response to metformin treatment von Ezzamouri, Bouchra, Rosario, Dorines, Bidkhori, Gholamreza, Lee, Sunjae, Uhlen, Mathias, Shoaie, Saeed

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Effect of Ecklonia cava polyphenol on adiposity reduction is associated with gut microbiota composition in subjects with abdominal obesity: A secondary analysis von Lee, Yu Sim, Kang, Seunghee, Kang, Nayeon, Yu, Jaehong, Park, Taesung, Lee, Sunjae, Kwon, Oran

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Integrated analysis of the microbiota-gut-brain axis in response to sleep deprivation and diet-induced obesity von Lee, Jibeom, Kang, Jiseung, Kim, Yumin, Lee, Sunjae, Oh, Chang-Myung, Kim, Tae

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