Obesity induced gut dysbiosis contributes to disease severity in an animal model of multiple sclerosis von Shahi, Shailesh K, Ghimire, Sudeep, Lehman, Peter, Mangalam, Ashutosh K

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A UPLC-MS/MS Based Rapid, Sensitive, and Non-Enzymatic Methodology for Quantitation of Dietary Isoflavones in Biological Fluids von Rashid, Faraz, Ghimire, Sudeep, Mangalam, Ashutosh K, Giri, Shailendra

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Game of microbes: the battle within - gut microbiota and multiple sclerosis von Turner, Ti-Ara, Lehman, Peter, Ghimire, Sudeep, Shahi, Shailesh K, Mangalam, Ashutosh

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Dietary Isoflavones Alter Gut Microbiota and Lipopolysaccharide Biosynthesis to Reduce Inflammation von Ghimire, Sudeep, Cady, Nicole M., Lehman, Peter, Peterson, Stephanie R., Shahi, Shailesh K., Rashid, Faraz, Giri, Shailendra, Mangalam, Ashutosh K.

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Identification of Clostridioides difficile-Inhibiting Gut Commensals Using Culturomics, Phenotyping, and Combinatorial Community Assembly von Ghimire, Sudeep, Roy, Chayan, Wongkuna, Supapit, Antony, Linto, Maji, Abhijit, Keena, Mitchel Chan, Foley, Andrew, Scaria, Joy

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Whole genome sequencing-based detection of antimicrobial resistance and virulence in non-typhoidal Salmonella enterica isolated from wildlife von Thomas, Milton, Fenske, Gavin John, Antony, Linto, Ghimire, Sudeep, Welsh, Ronald, Ramachandran, Akhilesh, Scaria, Joy

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Identification of a microbial sub-community from the feral chicken gut that reduces Salmonella colonization and improves gut health in a gnotobiotic chicken model von Wongkuna, Supapit, Ambat, Achuthan, Ghimire, Sudeep, Mattiello, Samara Paula, Maji, Abhijit, Kumar, Roshan, Antony, Linto, Chankhamhaengdecha, Surang, Janvilisri, Tavan, Nelson, Eric, Doerner, Kinchel C, More, Sunil, Behr, Melissa, Scaria, Joy

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Taxono-genomics description of Olsenella lakotia SW165T sp. nov., a new anaerobic bacterium isolated from the cecum of feral chicken von Wongkuna, Supapit, Ghimire, Sudeep, Janvilisri, Tavan, Doerner, Kinchel, Chankhamhaengdecha, Surang, Scaria, Joy

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Taxono-genomics description of Olsenella lakotia SW165T sp. nov., a new anaerobic bacterium isolated from cecum of feral chicken von Wongkuna, Supapit, Ghimire, Sudeep, Janvilisri, Tavan, Doerner, Kinchel, Chankhamhaengdecha, Surang, Scaria, Joy

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Taxono-genomics description of Olsenella lakotia SW165 T sp. nov., a new anaerobic bacterium isolated from cecum of feral chicken [version 1; peer review: 2 approved] von Wongkuna, Supapit, Ghimire, Sudeep, Janvilisri, Tavan, Doerner, Kinchel, Chankhamhaengdecha, Surang, Scaria, Joy

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High-Fat Diet-Induced Gut Microbiota Alterations Worsen Experimental Autoimmune Encephalomyelitis Severity von Shahi, Shailesh, Rux, Allison, Ghimire, Sudeep, Lehman, Peter, Meyerholz, David, Mangalam, Ashutosh

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Metagenomic characterization of the effect of feed additives on the gut microbiome and antibiotic resistome of feedlot cattle von Thomas, Milton, Webb, Megan, Ghimire, Sudeep, Blair, Amanda, Olson, Kenneth, Fenske, Gavin John, Fonder, Alex Thomas, Christopher-Hennings, Jane, Brake, Derek, Scaria, Joy

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Obesity Modulated Gut Microbiota Exacerbate Disease Severity in HLA-Class II Transgenic Mouse Model of Multiple Sclerosis von Shahi, Shailesh K, Ghimire, Sudeep, Lehman, Peter, Rux, Allison G, Mangalam, Ashutosh K

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Curtobacterium allii sp. nov., the actinobacterial pathogen causing onion bulb rot von Khanal, Manzeal, Bhatta, Bed Prakash, Timilsina, Sujan, Ghimire, Sudeep, Cochran, Kimberly, Malla, Subas

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Integration of culture-dependent and independent methods provides a more coherent picture of the pig gut microbiome von Fenske, Gavin J., Ghimire, Sudeep, Antony, Linto, Christopher-Hennings, Jane, Scaria, Joy

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IoT based situational awareness framework for real-time project management von Ghimire, Sudeep, Luis-Ferreira, Fernando, Nodehi, Tahereh, Jardim-Goncalves, Ricardo

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On MDA-SOA based Intercloud Interoperability framework von Nodehi, Tahereh, Ghimire, Sudeep, Jardim-Goncalves, Ricardo, Grilo, Antonio

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Low-dose glyphosate exposure alters gut microbiota composition and modulates gut homeostasis von Lehman, Peter C., Cady, Nicole, Ghimire, Sudeep, Shahi, Shailesh K., Shrode, Rachel L., Lehmler, Hans-Joachim, Mangalam, Ashutosh K.

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Interleukin-17A deficient mice microbiota induced regulatory T cells and suppressed experimental autoimmune encephalomyelitis (EAE) in WT HLA-DR3 transgenic mice von Shahi, Shailesh K, Jensen, Samantha N., Ghimire, Sudeep, Carter, CheyAnne Q., Guseva, Natalya V., Gibson-Corley, Katherine, Bossler, Aaron D., Ganesan, Sukirth M., Karandikar, Nitin J., Mangalam, Ashutosh K.

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Identification of Clostridioides difficile -Inhibiting Gut Commensals Using Culturomics, Phenotyping, and Combinatorial Community Assembly von Sudeep Ghimire, Chayan Roy, Supapit Wongkuna, Linto Antony, Abhijit Maji, Mitchel Chan Keena, Andrew Foley, Joy Scaria

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