QMEANDisCo—distance constraints applied on model quality estimation von Studer, Gabriel, Rempfer, Christine, Waterhouse, Andrew M, Gumienny, Rafal, Haas, Juergen, Schwede, Torsten

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ProMod3-A versatile homology modelling toolbox von Studer, Gabriel, Tauriello, Gerardo, Bienert, Stefan, Biasini, Marco, Johner, Niklaus, Schwede, Torsten

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The SWISS-MODEL Repository-new features and functionality von Bienert, Stefan, Waterhouse, Andrew, de Beer, Tjaart A P, Tauriello, Gerardo, Studer, Gabriel, Bordoli, Lorenza, Schwede, Torsten

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Assessing the local structural quality of transmembrane protein models using statistical potentials (QMEANBrane) von Studer, Gabriel, Biasini, Marco, Schwede, Torsten

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Continuous Automated Model EvaluatiOn (CAMEO) complementing the critical assessment of structure prediction in CASP12 von Haas, Jürgen, Barbato, Alessandro, Behringer, Dario, Studer, Gabriel, Roth, Steven, Bertoni, Martino, Mostaguir, Khaled, Gumienny, Rafal, Schwede, Torsten

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Estimation of model accuracy in CASP13 von Cheng, Jianlin, Choe, Myong‐Ho, Elofsson, Arne, Han, Kun‐Sop, Hou, Jie, Maghrabi, Ali H. A., McGuffin, Liam J., Menéndez‐Hurtado, David, Olechnovič, Kliment, Schwede, Torsten, Studer, Gabriel, Uziela, Karolis, Venclovas, Česlovas, Wallner, Björn

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A Comprehensive Mapping of the Druggable Cavities within the SARS-CoV-2 Therapeutically Relevant Proteins by Combining Pocket and Docking Searches as Implemented in Pockets 2.0 von Gervasoni, Silvia, Vistoli, Giulio, Talarico, Carmine, Manelfi, Candida, Beccari, Andrea R., Studer, Gabriel, Tauriello, Gerardo, Waterhouse, Andrew Mark, Schwede, Torsten, Pedretti, Alessandro

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Assessment of the assessment—All about complexes von Studer, Gabriel, Tauriello, Gerardo, Schwede, Torsten

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Simultaneous analysis of large-scale RNAi screens for pathogen entry von Rämö, Pauli, Drewek, Anna, Arrieumerlou, Cécile, Beerenwinkel, Niko, Ben-Tekaya, Houchaima, Cardel, Bettina, Casanova, Alain, Conde-Alvarez, Raquel, Cossart, Pascale, Csúcs, Gábor, Eicher, Simone, Emmenlauer, Mario, Greber, Urs, Hardt, Wolf-Dietrich, Helenius, Ari, Kasper, Christoph, Kaufmann, Andreas, Kreibich, Saskia, Kühbacher, Andreas, Kunszt, Peter, Low, Shyan Huey, Mercer, Jason, Mudrak, Daria, Muntwiler, Simone, Pelkmans, Lucas, Pizarro-Cerdá, Javier, Podvinec, Michael, Pujadas, Eva, Rinn, Bernd, Rouilly, Vincent, Schmich, Fabian, Siebourg-Polster, Juliane, Snijder, Berend, Stebler, Michael, Studer, Gabriel, Szczurek, Ewa, Truttmann, Matthias, von Mering, Christian, Vonderheit, Andreas, Yakimovich, Artur, Bühlmann, Peter, Dehio, Christoph

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SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information von Biasini, Marco, Bienert, Stefan, Waterhouse, Andrew, Arnold, Konstantin, Studer, Gabriel, Schmidt, Tobias, Kiefer, Florian, Gallo Cassarino, Tiziano, Bertoni, Martino, Bordoli, Lorenza, Schwede, Torsten

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QMEANDisCo—distance constraints applied on model quality estimation von Studer, Gabriel, Rempfer, Christine, Waterhouse, Andrew M, Gumienny, Rafal, Haas, Juergen, Schwede, Torsten

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SWISS-MODEL: homology modelling of protein structures and complexes von Waterhouse, Andrew, Bertoni, Martino, Bienert, Stefan, Studer, Gabriel, Tauriello, Gerardo, Gumienny, Rafal, Heer, Florian T, de Beer, Tjaart A P, Rempfer, Christine, Bordoli, Lorenza, Lepore, Rosalba, Schwede, Torsten

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The structure assessment web server: for proteins, complexes and more von Waterhouse, Andrew M, Studer, Gabriel, Robin, Xavier, Bienert, Stefan, Tauriello, Gerardo, Schwede, Torsten

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Embedding-based alignment: combining protein language models with dynamic programming alignment to detect structural similarities in the twilight-zone von Pantolini, Lorenzo, Studer, Gabriel, Pereira, Joana, Durairaj, Janani, Tauriello, Gerardo, Schwede, Torsten

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Assessment of protein–ligand complexes in CASP15 von Robin, Xavier, Studer, Gabriel, Durairaj, Janani, Eberhardt, Jerome, Schwede, Torsten, Walters, W. Patrick

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Uncovering new families and folds in the natural protein universe von Durairaj, Janani, Waterhouse, Andrew M., Mets, Toomas, Brodiazhenko, Tetiana, Abdullah, Minhal, Studer, Gabriel, Tauriello, Gerardo, Akdel, Mehmet, Andreeva, Antonina, Bateman, Alex, Tenson, Tanel, Hauryliuk, Vasili, Schwede, Torsten, Pereira, Joana

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New prediction categories in CASP15 von Kryshtafovych, Andriy, Antczak, Maciej, Szachniuk, Marta, Zok, Tomasz, Kretsch, Rachael C., Rangan, Ramya, Pham, Phillip, Das, Rhiju, Robin, Xavier, Studer, Gabriel, Durairaj, Janani, Eberhardt, Jerome, Sweeney, Aaron, Topf, Maya, Schwede, Torsten, Fidelis, Krzysztof, Moult, John

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Introducing “best single template” models as reference baseline for the Continuous Automated Model Evaluation (CAMEO) von Haas, Juergen, Gumienny, Rafal, Barbato, Alessandro, Ackermann, Flavio, Tauriello, Gerardo, Bertoni, Martino, Studer, Gabriel, Smolinski, Anna, Schwede, Torsten

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Global profiling of protein complex dynamics with an experimental library of protein interaction markers von Dörig, Christian, Marulli, Cathy, Peskett, Thomas, Volkmar, Norbert, Pantolini, Lorenzo, Studer, Gabriel, Paleari, Camilla, Frommelt, Fabian, Schwede, Torsten, de Souza, Natalie, Barral, Yves, Picotti, Paola

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Modeling of Protein Tertiary and Quaternary Structures Based on Evolutionary Information von Studer, Gabriel, Tauriello, Gerardo, Bienert, Stefan, Waterhouse, Andrew Mark, Bertoni, Martino, Bordoli, Lorenza, Schwede, Torsten, Lepore, Rosalba

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