The code and beyond: transcription regulation by the RNA polymerase II carboxy-terminal domain von Harlen, Kevin M., Churchman, L. Stirling

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Splicing Kinetics and Coordination Revealed by Direct Nascent RNA Sequencing through Nanopores von Drexler, Heather L., Choquet, Karine, Churchman, L. Stirling

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Optimized localization analysis for single-molecule tracking and super-resolution microscopy von Flyvbjerg, Henrik, Mortensen, Kim I, Churchman, L Stirling, Spudich, James A

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Native elongating transcript sequencing reveals human transcriptional activity at nucleotide resolution von Mayer, Andreas, di Iulio, Julia, Maleri, Seth, Eser, Umut, Vierstra, Jeff, Reynolds, Alex, Sandstrom, Richard, Stamatoyannopoulos, John A, Churchman, L Stirling

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Synchronized mitochondrial and cytosolic translation programs von Couvillion, Mary T., Soto, Iliana C., Shipkovenska, Gergana, Churchman, L. Stirling

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Nascent transcript sequencing visualizes transcription at nucleotide resolution von Churchman, L. Stirling, Weissman, Jonathan S.

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Single mammalian cells compensate for differences in cellular volume and DNA copy number through independent global transcriptional mechanisms von Padovan-Merhar, Olivia, Nair, Gautham P., Biaesch, Andrew, Mayer, Andreas, Scarfone, Steven, Foley, Shawn W., Wu, Angela R., Churchman, L. Stirling, Singh, Abhyudai, Raj, Arjun

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Single-molecule regulatory architectures captured by chromatin fiber sequencing von Stergachis, Andrew B, Debo, Brian M, Haugen, Eric, Churchman, L Stirling, Stamatoyannopoulos, John A

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Pause & go: from the discovery of RNA polymerase pausing to its functional implications von Mayer, Andreas, Landry, Heather M, Churchman, L Stirling

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Central dogma rates in human mitochondria von McShane, Erik, Churchman, L Stirling

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BET Bromodomain Proteins Function as Master Transcription Elongation Factors Independent of CDK9 Recruitment von Winter, Georg E., Mayer, Andreas, Buckley, Dennis L., Erb, Michael A., Roderick, Justine E., Vittori, Sarah, Reyes, Jaime M., di Iulio, Julia, Souza, Amanda, Ott, Christopher J., Roberts, Justin M., Zeid, Rhamy, Scott, Thomas G., Paulk, Joshiawa, Lachance, Kate, Olson, Calla M., Dastjerdi, Shiva, Bauer, Sophie, Lin, Charles Y., Gray, Nathanael S., Kelliher, Michelle A., Churchman, L. Stirling, Bradner, James E.

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A Chromatin-Based Mechanism for Limiting Divergent Noncoding Transcription von Marquardt, Sebastian, Escalante-Chong, Renan, Pho, Nam, Wang, Jue, Churchman, L. Stirling, Springer, Michael, Buratowski, Stephen

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The Ground State and Evolution of Promoter Region Directionality von Jin, Yi, Eser, Umut, Struhl, Kevin, Churchman, L. Stirling

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Proteotoxicity from aberrant ribosome biogenesis compromises cell fitness von Tye, Blake W, Commins, Nicoletta, Ryazanova, Lillia V, Wühr, Martin, Springer, Michael, Pincus, David, Churchman, L Stirling

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Comprehensive RNA Polymerase II Interactomes Reveal Distinct and Varied Roles for Each Phospho-CTD Residue von Harlen, Kevin M., Trotta, Kristine L., Smith, Erin E., Mosaheb, Mohammad M., Fuchs, Stephen M., Churchman, L. Stirling

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Genome-wide profiling of RNA polymerase transcription at nucleotide resolution in human cells with native elongating transcript sequencing von Mayer, Andreas, Churchman, L Stirling

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GeneWalk identifies relevant gene functions for a biological context using network representation learning von Ietswaart, Robert, Gyori, Benjamin M, Bachman, John A, Sorger, Peter K, Churchman, L Stirling

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Balanced mitochondrial and cytosolic translatomes underlie the biogenesis of human respiratory complexes von Soto, Iliana, Couvillion, Mary, Hansen, Katja G, McShane, Erik, Moran, J Conor, Barrientos, Antoni, Churchman, L Stirling

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Essential histone chaperones collaborate to regulate transcription and chromatin integrity von Viktorovskaya, Olga, Chuang, James, Jain, Dhawal, Reim, Natalia I, López-Rivera, Francheska, Murawska, Magdalena, Spatt, Dan, Churchman, L Stirling, Park, Peter J, Winston, Fred

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The Multiple Levels of Mitonuclear Coregulation von Isaac, R. Stefan, McShane, Erik, Churchman, L. Stirling

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