A pangenome graph reference of 30 chicken genomes allows genotyping of large and complex structural variants von Rice, Edward S, Alberdi, Antton, Alfieri, James, Athrey, Giridhar, Balacco, Jennifer R, Bardou, Philippe, Blackmon, Heath, Charles, Mathieu, Cheng, Hans H, Fedrigo, Olivier, Fiddaman, Steven R, Formenti, Giulio, Frantz, Laurent A F, Gilbert, M Thomas P, Hearn, Cari J, Jarvis, Erich D, Klopp, Christophe, Marcos, Sofia, Mason, Andrew S, Velez-Irizarry, Deborah, Xu, Luohao, Warren, Wesley C

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Repertoire analysis of γδ T cells in the chicken enables functional annotation of the genomic region revealing highly variable pan-tissue TCR gamma V gene usage as well as identify... von Dixon, Robert, Preston, Stephen G, Dascalu, Stefan, Flammer, Patrik G, Fiddaman, Steven R, McLoughlin, Kirstie, Boyd, Amy, Volf, Jiri, Rychlik, Ivan, Bonsall, Michael B, Kaspers, Bernd, Smith, Adrian L

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Evidence of Pathogen-Induced Immunogenetic Selection across the Large Geographic Range of a Wild Seabird von Levy, Hila, Fiddaman, Steven R, Vianna, Juliana A, Noll, Daly, Clucas, Gemma V, Sidhu, Jasmine K H, Polito, Michael J, Bost, Charles A, Phillips, Richard A, Crofts, Sarah, Miller, Gary D, Pistorius, Pierre, Bonnadonna, Francesco, Le Bohec, Céline, Barbosa, Andrés, Trathan, Phil, Raya Rey, Andrea, Frantz, Laurent A F, Hart, Tom, Smith, Adrian L

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Correction to: Repertoire analysis of γδ T cells in the chicken enables functional annotation of the genomic region revealing highly variable pan-tissue TCR gamma V gene usage as w... von Dixon, Robert, Preston, Stephen G., Dascalu, Stefan, Flammer, Patrik G., Fiddaman, Steven R., McLoughlin, Kirstie, Boyd, Amy, Volf, Jiri, Rychlik, Ivan, Bonsall, Michael B., Kaspers, Bernd, Smith, Adrian L.

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Identification of Circovirus Genome in a Chinstrap Penguin ( Pygoscelis antarcticus ) and Adélie Penguin ( Pygoscelis adeliae ) on the Antarctic Peninsula von Levy, Hila, Fiddaman, Steven R, Djurhuus, Anni, Black, Caitlin E, Kraberger, Simona, Smith, Adrian L, Hart, Tom, Varsani, Arvind

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Comparison of CpG- and UpA-mediated restriction of RNA virus replication in mammalian and avian cells and investigation of potential ZAP-mediated shaping of host transcriptome comp... von Odon, Valerie, Fiddaman, Steven, Smith, Adrian, Simmonds, Peter

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Ancient chicken remains reveal the origins of virulence in Marek's disease virus von Fiddaman, Steven R, Dimopoulos, Evangelos A, Lebrasseur, Ophélie, du Plessis, Louis, Vrancken, Bram, Charlton, Sophy, Haruda, Ashleigh F, Tabbada, Kristina, Flammer, Patrik G, Dascalu, Stefan, Marković, Nemanja, Li, Hannah, Franklin, Gabrielle, Symmons, Robert, Baron, Henriette, Daróczi-Szabó, László, Shaymuratova, Dilyara N, Askeyev, Igor V, Putelat, Olivier, Sana, Maria, Davoudi, Hossein, Fathi, Homa, Mucheshi, Amir Saed, Vahdati, Ali Akbar, Zhang, Liangren, Foster, Alison, Sykes, Naomi, Baumberg, Gabrielle Cass, Bulatović, Jelena, Askeyev, Arthur O, Askeyev, Oleg V, Mashkour, Marjan, Pybus, Oliver G, Nair, Venugopal, Larson, Greger, Smith, Adrian L, Frantz, Laurent A F

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Receding ice drove parallel expansions in Southern Ocean penguins von Cole, Theresa L., Dutoit, Ludovic, Dussex, Nicolas, Hart, Tom, Alexander, Alana, Younger, Jane L., Clucas, Gemma V., Frugone, María José, Cherel, Yves, Cuthbert, Richard, Ellenberg, Ursula, Fiddaman, Steven R., Hiscock, Johanna, Houston, David, Jouventin, Pierre, Mattern, Thomas, Miller, Gary, Miskelly, Colin, Nolan, Paul, Polito, Michael J., Quillfeldt, Petra, Ryan, Peter G., Smith, Adrian, Tennyson, Alan J. D., Thompsona, David, Wieneckeb, Barbara, Viannac, Juliana A., Waters, Jonathan M.

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Adaptation and Cryptic Pseudogenization in Penguin Toll-Like Receptors von Fiddaman, Steven R, Vinkler, Michal, Spiro, Simon G, Levy, Hila, Emerling, Christopher A, Boyd, Amy C, Dimopoulos, Evangelos A, Vianna, Juliana A, Cole, Theresa L, Pan, Hailin, Fang, Miaoquan, Zhang, Guojie, Hart, Tom, Frantz, Laurent A F, Smith, Adrian L

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Genomic insights into the secondary aquatic transition of penguins von Cole, Theresa L., Zhou, Chengran, Fang, Miaoquan, Pan, Hailin, Ksepka, Daniel T., Fiddaman, Steven R., Emerling, Christopher A., Thomas, Daniel B., Bi, Xupeng, Fang, Qi, Ellegaard, Martin R., Feng, Shaohong, Smith, Adrian L., Heath, Tracy A., Tennyson, Alan J. D., Borboroglu, Pablo García, Wood, Jamie R., Hadden, Peter W., Grosser, Stefanie, Bost, Charles-André, Cherel, Yves, Mattern, Thomas, Hart, Tom, Sinding, Mikkel-Holger S., Shepherd, Lara D., Phillips, Richard A., Quillfeldt, Petra, Masello, Juan F., Bouzat, Juan L., Ryan, Peter G., Thompson, David R., Ellenberg, Ursula, Dann, Peter, Miller, Gary, Dee Boersma, P., Zhao, Ruoping, Gilbert, M. Thomas P., Yang, Huanming, Zhang, De-Xing, Zhang, Guojie

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Mitogenomes Uncover Extinct Penguin Taxa and Reveal Island Formation as a Key Driver of Speciation von Cole, Theresa L, Ksepka, Daniel T, Mitchell, Kieren J, Tennyson, Alan J D, Thomas, Daniel B, Pan, Hailin, Zhang, Guojie, Rawlence, Nicolas J, Wood, Jamie R, Bover, Pere, Bouzat, Juan L, Cooper, Alan, Fiddaman, Steven R, Hart, Tom, Miller, Gary, Ryan, Peter G, Shepherd, Lara D, Wilmshurst, Janet M, Waters, Jonathan M

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Understanding the evolution of immune genes in jawed vertebrates von Vinkler, Michal, Fiddaman, Steven R., Těšický, Martin, O'Connor, Emily A., Savage, Anna E., Lenz, Tobias L., Smith, Adrian L., Kaufman, Jim, Bolnick, Daniel I., Davies, Charli S., Dedić, Neira, Flies, Andrew S., Samblás, M. Mercedes Gómez, Henschen, Amberleigh E., Novák, Karel, Palomar, Gemma, Raven, Nynke, Samaké, Kalifa, Slade, Joel, Veetil, Nithya Kuttiyarthu, Voukali, Eleni, Höglund, Jacob, Richardson, David S., Westerdahl, Helena

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High-coverage genomes to elucidate the evolution of penguins von Pan, Hailin, Cole, Theresa L, Bi, Xupeng, Fang, Miaoquan, Zhou, Chengran, Yang, Zhengtao, Ksepka, Daniel T, Hart, Tom, Bouzat, Juan L, Argilla, Lisa S, Bertelsen, Mads F, Boersma, P Dee, Bost, Charles-André, Cherel, Yves, Dann, Peter, Fiddaman, Steven R, Howard, Pauline, Labuschagne, Kim, Mattern, Thomas, Miller, Gary, Parker, Patricia, Phillips, Richard A, Quillfeldt, Petra, Ryan, Peter G, Taylor, Helen, Thompson, David R, Young, Melanie J, Ellegaard, Martin R, Gilbert, M Thomas P, Sinding, Mikkel-Holger S, Pacheco, George, Shepherd, Lara D, Tennyson, Alan J D, Grosser, Stefanie, Kay, Emily, Nupen, Lisa J, Ellenberg, Ursula, Houston, David M, Reeve, Andrew Hart, Johnson, Kathryn, Masello, Juan F, Stracke, Thomas, McKinlay, Bruce, Borboroglu, Pablo García, Zhang, De-Xing, Zhang, Guojie

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Correction to: Repertoire analysis of [gamma][delta] T cells in the chicken enables functional annotation of the genomic region revealing highly variable pan-tissue TCR gamma V gen... von Dixon, Robert, Preston, Stephen G, Dascalu, Stefan, Flammer, Patrik G, Fiddaman, Steven R, McLoughlin, Kirstie, Boyd, Amy, Volf, Jiri, Rychlik, Ivan, Bonsall, Michael B, Kaspers, Bernd, Smith, Adrian L

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Repertoire analysis of [gamma][delta] T cells in the chicken enables functional annotation of the genomic region revealing highly variable pan-tissue TCR gamma V gene usage as well... von Dixon, Robert, Preston, Stephen G, Dascalu, Stefan, Flammer, Patrik G, Fiddaman, Steven R, McLoughlin, Kirstie, Boyd, Amy, Volf, Jiri, Rychlik, Ivan, Bonsall, Michael B, Kaspers, Bernd, Smith, Adrian L

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Receding ice drove parallel expansions in Southern Ocean penguins von Dutoit, Ludovic, Dussex, Nicolas, Hart, Tom, Alexander, Alana, Younger, Jane L., Clucas, Gemma V., Frugone, Marμa José, Cherel, Yves, Cuthbert, Richard, Ellenberg, Ursula, Fiddaman, Steven R., Hiscock, Johanna, Houston, David, Jouventin, Pierre, Mattern, Thomas, Miller, Gary, Miskelly, Colin, Nolan, Paul, Polito, Michael J., Quillfeldt, Petra, Ryan, Peter G., Smith, Adrian, Tennyson, Alan J.D., Thompson, David, Wienecke, Barbara, Vianna, Juliana A., Waters, Jonathan M.

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Correction to: High-coverage genomes to elucidate the evolution of penguins von Pan, Hailin, Cole, Theresa L, Bi, Xupeng, Fang, Miaoquan, Zhou, Chengran, Yang, Zhengtao, Ksepka, Daniel T, Hart, Tom, Bouzat, Juan L, Argilla, Lisa S, Bertelsen, Mads F, Boersma, P Dee, Bost, Charles-Andre, Cherel, Yves, Dann, Peter, Fiddaman, Steven R, Howard, Pauline, Labuschagne, Kim, Mattern, Thomas, Miller, Gary, Parker, Patricia, Phillips, Richard A, Quillfeldt, Petra, Ryan, Peter G, Taylor, Helen, Thompson, David R, Young, Melanie J, Ellegaard, Martin R, Gilbert, M Thomas P, Sinding, Mikkel-Holger S, Pacheco, George, Shepherd, Lara D, Tennyson, Alan J D, Grosser, Stefanie, Kay, Emily, Nupen, Lisa J, Ellenberg, Ursula, Houston, David M, Reeve, Andrew Hart, Johnson, Kathryn, Masello, Juan F, Stracke, Thomas, McKinlay, Bruce, Garc´ıa Borboroglu, Pablo, Zhang, De-Xing, Zhang, Guojie

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High-coverage genomes to elucidate the evolution of penguins von Pan, Hailin, Cole, Theresa L., Bi, Xupeng, Fang, Miaoquan, Zhou, Chengran, Yang, Zhengtao, Ksepka, Daniel T., Hart, Tom, Bouzat, Juan L., Argilla, Lisa S., Bertelsen, Mads F., Boersma, P. Dee, Bost, Charles-André, Cherel, Yves, Dann, Peter, Fiddaman, Steven R., Howard, Pauline, Labuschagne, Kim, Mattern, Thomas, Miller, Gary, Parker, Patricia, Phillips, Richard A., Quillfeldt, Petra, Ryan, Peter G., Taylor, Helen, Thompson, David R., Young, Melanie J., Ellegaard, Martin, Gilbert, Marcus Thomas Pius, Sinding, Mikkel Holger Strander, Pacheco, George, Shepherd, Lara D., Tennyson, Alan J.D., Grosser, Stefanie, Kay, Emily, Nupen, Lisa J., Ellenberg, Ursula, Houston, David M., Reeve, Andrew Hart, Johnson, Kathryn, Masello, Juan F., Stracke, Thomas, McKinlay, Bruce, Borboroglu, Pablo García, Zhang, De-Xing, Zhang, Guojie

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Understanding the evolution of immune genes in jawed vertebrates von Vinkler, Michal, Fiddaman, Steven R, Těšický, Martin, O'Connor, Emily A, Savage, Anna E, Lenz, Tobias L, Smith, Adrian L, Kaufman, Jim, Bolnick, Daniel I, Davies, Charli S, Dedić, Neira, Flies, Andrew S, Samblás, M Mercedes Gómez, Henschen, Amberleigh E, Novák, Karel, Palomar, Gemma, Raven, Nynke, Samaké, Kalifa, Slade, Joel, Veetil, Nithya Kuttiyarthu, Voukali, Eleni, Höglund, Jacob, Richardson, David S, Westerdahl, Helena

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Genomic insights into the secondary aquatic transition of penguins von Cole, Theresa L, Zhou, Chengran, Fang, Miaoquan, Pan, Hailin, Ksepka, Daniel T, Fiddaman, Steven R, Emerling, Christopher A, Thomas, Daniel B, Bi, Xupeng, Fang, Qi, Ellegaard, Martin Rene, Feng, Shaohong, Smith, Adrian L, Heath, Tracy A, Tennyson, Alan J. D, Borboroglu, Pablo García, Wood, Jamie R, Hadden, Peter W, Grosser, Stefanie, Bost, Charles-André, Cherel, Yves, Mattern, Thomas, Hart, Tom, Sinding, Mikkel Holger Strander, Shepherd, Lara D, Phillips, Richard A, Quillfeldt, Petra, Masello, Juan F, Bouzat, Juan L, Ryan, Peter G, Thompson, David R, Ellenberg, Ursula, Dann, Peter, Miller, Gary, Dee Boersma, Boersma, Zhao, Ruoping, Gilbert, Marcus Thomas Pius, Yang, Huanming, Zhang, De-Xing, Zhang, Guojie

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