Phase separation drives aberrant chromatin looping and cancer development von Ahn, Jeong Hyun, Davis, Eric S., Daugird, Timothy A., Zhao, Shuai, Quiroga, Ivana Yoseli, Uryu, Hidetaka, Li, Jie, Storey, Aaron J., Tsai, Yi-Hsuan, Keeley, Daniel P., Mackintosh, Samuel G., Edmondson, Ricky D., Byrum, Stephanie D., Cai, Ling, Tackett, Alan J., Zheng, Deyou, Legant, Wesley R., Phanstiel, Douglas H., Wang, Gang Greg

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Quantitative analysis of septin Cdc10 & Cdc3-associated proteome during stress response in the fungal pathogen Cryptococcus neoformans von Martinez Barrera, Stephani, Hatchell, Emma, Byrum, Stephanie D, Mackintosh, Samuel G, Kozubowski, Lukasz

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Anti-PD-1/L1 lead-in before MAPK inhibitor combination maximizes antitumor immunity and efficacy von Wang, Yujue, Liu, Sixue, Yang, Zhentao, Algazi, Alain P., Lomeli, Shirley H., Wang, Yan, Othus, Megan, Hong, Aayoung, Wang, Xiaoyan, Randolph, Chris E., Jones, Alexis M., Bosenberg, Marcus W., Byrum, Stephanie D., Tackett, Alan J., Lopez, Henry, Yates, Clayton, Solit, David B., Ribas, Antoni, Piva, Marco, Moriceau, Gatien, Lo, Roger S.

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ATXN7L3 and ENY2 Coordinate Activity of Multiple H2B Deubiquitinases Important for Cellular Proliferation and Tumor Growth von Atanassov, Boyko S., Mohan, Ryan D., Lan, Xianjiang, Kuang, Xianghong, Lu, Yue, Lin, Kevin, McIvor, Elizabeth, Li, Wenqian, Zhang, Ying, Florens, Laurence, Byrum, Stephanie D., Mackintosh, Samuel G., Calhoun-Davis, Tammy, Koutelou, Evangelia, Wang, Li, Tang, Dean G., Tackett, Alan J., Washburn, Michael P., Workman, Jerry L., Dent, Sharon Y.R.

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DNA methylation on N(6)-adenine in mammalian embryonic stem cells von Wu, Tao P, Wang, Tao, Seetin, Matthew G, Lai, Yongquan, Zhu, Shijia, Lin, Kaixuan, Liu, Yifei, Byrum, Stephanie D, Mackintosh, Samuel G, Zhong, Mei, Tackett, Alan, Wang, Guilin, Hon, Lawrence S, Fang, Gang, Swenberg, James A, Xiao, Andrew Z

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Trichloroethylene metabolite modulates DNA methylation-dependent gene expression in Th1-polarized CD4+ T cells from autoimmune-prone mice von Choudhury, Samrat Roy, Byrum, Stephanie D, Blossom, Sarah J

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Time- and radiation-dose dependent changes in the plasma proteome after total body irradiation of non-human primates: Implications for biomarker selection von Byrum, Stephanie D, Burdine, Marie S, Orr, Lisa, Mackintosh, Samuel G, Authier, Simon, Pouliot, Mylene, Hauer-Jensen, Martin, Tackett, Alan J

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In vivo transcriptional analysis of mice infected with Leishmania major unveils cellular heterogeneity and altered transcriptomic profiling at single-cell resolution von Venugopal, Gopinath, Bird, Jordan T, Washam, Charity L, Roys, Hayden, Bowlin, Anne, Byrum, Stephanie D, Weinkopff, Tiffany

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ChAP-MS: A Method for Identification of Proteins and Histone Posttranslational Modifications at a Single Genomic Locus von Byrum, Stephanie D., Raman, Ana, Taverna, Sean D., Tackett, Alan J.

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Neoplastic signatures: Comparative proteomics of canine hepatobiliary neuroendocrine tumors to normal niche tissue von Batts, Tifini L, Sasaki, Emi, Miller, Mayzie, Sparago, Joshua, Bauer, Rudy W, Paulsen, Daniel, Boudreaux, Bonnie, Liu, Chin-Chi, Byrum, Stephanie D, Johnston, Andrea N

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Metaproteomics reveals potential mechanisms by which dietary resistant starch supplementation attenuates chronic kidney disease progression in rats von Zybailov, Boris L, Glazko, Galina V, Rahmatallah, Yasir, Andreyev, Dmitri S, McElroy, Taylor, Karaduta, Oleg, Byrum, Stephanie D, Orr, Lisa, Tackett, Alan J, Mackintosh, Samuel G, Edmondson, Ricky D, Kieffer, Dorothy A, Martin, R J, Adams, Sean H, Vaziri, Nosratola D, Arthur, John M

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Loss of E-Cadherin Inhibits CD103 Antitumor Activity and Reduces Checkpoint Blockade Responsiveness in Melanoma von Shields, Bradley D, Koss, Brian, Taylor, Erin M, Storey, Aaron J, West, Kirk L, Byrum, Stephanie D, Mackintosh, Samuel G, Edmondson, Rick, Mahmoud, Fade, Shalin, Sara C, Tackett, Alan J

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Indicators of responsiveness to immune checkpoint inhibitors von Shields, Bradley D., Mahmoud, Fade, Taylor, Erin M., Byrum, Stephanie D., Sengupta, Deepanwita, Koss, Brian, Baldini, Giulia, Ransom, Seth, Cline, Kyle, Mackintosh, Samuel G., Edmondson, Ricky D., Shalin, Sara, Tackett, Alan J.

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Cognitive impairment resulting from treatment with docetaxel, doxorubicin, and cyclophosphamide von Brown, Taurean, McElroy, Taylor, Simmons, Pilar, Walters, Huddoy, Ntagwabira, Fabio, Wang, Jing, Byrum, Stephanie D., Allen, Antiño R.

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Purification of a specific native genomic locus for proteomic analysis von Byrum, Stephanie D, Taverna, Sean D, Tackett, Alan J

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Ionizing Radiation Activates Mitochondrial Function in Osteoclasts and Causes Bone Loss in Young Adult Male Mice von Richardson, Kimberly K, Ling, Wen, Krager, Kimberly, Fu, Qiang, Byrum, Stephanie D, Pathak, Rupak, Aykin-Burns, Nukhet, Kim, Ha-Neui

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Spaceflight induces oxidative damage to blood‐brain barrier integrity in a mouse model von Mao, Xiao W., Nishiyama, Nina C., Byrum, Stephanie D., Stanbouly, Seta, Jones, Tamako, Holley, Jacob, Sridharan, Vijayalakshmi, Boerma, Marjan, Tackett, Alan J., Willey, Jeffrey S., Pecaut, Michael J., Delp, Michael D.

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Understanding PTM Cross Talk Through a Visualization Tool, PTMViz von Chappell, Kevin, Byrum, Stephanie D.

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Understanding proteome quantification in an interactive learning module on Google Cloud Platform von O’Connell, Kyle A, Kopchick, Benjamin, Carlson, Thad, Belardo, David, Byrum, Stephanie D

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Subchronic Electronic Cigarette Exposures Have Overlapping Protein Biomarkers with Chronic Obstructive Pulmonary Disease and Idiopathic Pulmonary Fibrosis von Scieszka, David, Byrum, Stephanie D, Mackintosh, Samuel G, Madison, Matthew, Knight, John, Campen, Matthew J, Kheradmand, Farrah

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