hypeR: an R package for geneset enrichment workflows von Federico, Anthony, Monti, Stefano

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On the fatigue strength enhancement of additive manufactured AlSi10Mg parts by mechanical and thermal post-processing von Bagherifard, Sara, Beretta, Niccolò, Monti, Stefano, Riccio, Martina, Bandini, Michele, Guagliano, Mario

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Cold spray deposition for additive manufacturing of freeform structural components compared to selective laser melting von Bagherifard, Sara, Monti, Stefano, Zuccoli, Maria Vittoria, Riccio, Martina, Kondás, Ján, Guagliano, Mario

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Structure learning for gene regulatory networks von Federico, Anthony, Kern, Joseph, Varelas, Xaralabos, Monti, Stefano

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Tailoring cold spray additive manufacturing of steel 316 L for static and cyclic load-bearing applications von Bagherifard, Sara, Kondas, Jan, Monti, Stefano, Cizek, Jan, Perego, Fabrizio, Kovarik, Ondrej, Lukac, Frantisek, Gaertner, Frank, Guagliano, Mario

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Yap suppresses T-cell function and infiltration in the tumor microenvironment von Stampouloglou, Eleni, Cheng, Nan, Federico, Anthony, Slaby, Emily, Monti, Stefano, Szeto, Gregory L., Varelas, Xaralabos

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yQTL Pipeline: A structured computational workflow for large scale quantitative trait loci discovery and downstream visualization von Li, Mengze, Song, Zeyuan, Gurinovich, Anastasia, Schork, Nicholas, Sebastiani, Paola, Monti, Stefano

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Consensus Clustering: A Resampling-Based Method for Class Discovery and Visualization of Gene Expression Microarray Data von Monti, Stefano, Tamayo, Pablo, Mesirov, Jill, Golub, Todd

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Integrative analysis reveals selective 9p24.1 amplification, increased PD-1 ligand expression, and further induction via JAK2 in nodular sclerosing Hodgkin lymphoma and primary med... von Green, Michael R., Monti, Stefano, Rodig, Scott J., Juszczynski, Przemyslaw, Currie, Treeve, O'Donnell, Evan, Chapuy, Bjoern, Takeyama, Kunihiko, Neuberg, Donna, Golub, Todd R., Kutok, Jeffery L., Shipp, Margaret A.

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Discovery and Characterization of Super-Enhancer-Associated Dependencies in Diffuse Large B Cell Lymphoma von Chapuy, Bjoern, McKeown, Michael R., Lin, Charles Y., Monti, Stefano, Roemer, Margaretha G.M., Qi, Jun, Rahl, Peter B., Sun, Heather H., Yeda, Kelly T., Doench, John G., Reichert, Elaine, Kung, Andrew L., Rodig, Scott J., Young, Richard A., Shipp, Margaret A., Bradner, James E.

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Targetable genetic features of primary testicular and primary central nervous system lymphomas von Chapuy, Bjoern, Roemer, Margaretha G.M., Stewart, Chip, Tan, Yuxiang, Abo, Ryan P., Zhang, Liye, Dunford, Andrew J., Meredith, David M., Thorner, Aaron R., Jordanova, Ekaterina S., Liu, Gang, Feuerhake, Friedrich, Ducar, Matthew D., Illerhaus, Gerald, Gusenleitner, Daniel, Linden, Erica A., Sun, Heather H., Homer, Heather, Aono, Miyuki, Pinkus, Geraldine S., Ligon, Azra H., Ligon, Keith L., Ferry, Judith A., Freeman, Gordon J., van Hummelen, Paul, Golub, Todd R., Getz, Gad, Rodig, Scott J., de Jong, Daphne, Monti, Stefano, Shipp, Margaret A.

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How the AHR Became Important in Cancer: The Role of Chronically Active AHR in Cancer Aggression von Wang, Zhongyan, Snyder, Megan, Kenison, Jessica E, Yang, Kangkang, Lara, Brian, Lydell, Emily, Bennani, Kawtar, Novikov, Olga, Federico, Anthony, Monti, Stefano, Sherr, David H

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Selective JAK2 Inhibition Specifically Decreases Hodgkin Lymphoma and Mediastinal Large B-cell Lymphoma Growth In Vitro and In Vivo von YANSHENG HAO, BJOERN CHAPUY, MONTI, Stefano, SUN, Heather H, RODIG, Scott J, SHIPP, Margaret A

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Metabolic Signatures Uncover Distinct Targets in Molecular Subsets of Diffuse Large B Cell Lymphoma von Caro, Pilar, Kishan, Amar U., Norberg, Erik, Stanley, Illana A., Chapuy, Bjoern, Ficarro, Scott B., Polak, Klaudia, Tondera, Daniel, Gounarides, John, Yin, Hong, Zhou, Feng, Green, Michael R., Chen, Linfeng, Monti, Stefano, Marto, Jarrod A., Shipp, Margaret A., Danial, Nika N.

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The role of the aryl hydrocarbon receptor in normal and malignant B cell development von Sherr, David H., Monti, Stefano

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Cell Type Diversity Statistic: An Entropy-Based Metric to Compare Overall Cell Type Composition Across Samples von Karagiannis, Tanya T, Monti, Stefano, Sebastiani, Paola

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Bayesian differential analysis of cell type proportions: opinion von Karagiannis, Tanya T, Monti, Stefano, Sebastiani, Paola

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Contextualized Protein-Protein Interactions von Federico, Anthony, Monti, Stefano

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Yap/Taz inhibit goblet cell fate to maintain lung epithelial homeostasis von Hicks-Berthet, Julia, Ning, Boting, Federico, Anthony, Tilston-Lunel, Andrew, Matschulat, Adeline, Ai, Xingbin, Lenburg, Marc E., Beane, Jennifer, Monti, Stefano, Varelas, Xaralabos

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SYK Inhibition Modulates Distinct PI3K/AKT- Dependent Survival Pathways and Cholesterol Biosynthesis in Diffuse Large B Cell Lymphomas von Chen, Linfeng, Monti, Stefano, Juszczynski, Przemyslaw, Ouyang, Jing, Chapuy, Bjoern, Neuberg, Donna, Doench, John G., Bogusz, Agata M., Habermann, Thomas M., Dogan, Ahmet, Witzig, Thomas E., Kutok, Jeffery L., Rodig, Scott J., Golub, Todd, Shipp, Margaret A.

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